KEGG   Amphiprion ocellaris (clown anemonefish): 111569326
Entry
111569326         CDS       T06018                                 
Symbol
larp1b
Name
(RefSeq) la-related protein 1B isoform X1
  KO
K18757  la-related protein 1
Organism
aoce  Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:aoce00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aoce03019]
    111569326 (larp1b)
Messenger RNA biogenesis [BR:aoce03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     111569326 (larp1b)
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 111569326
NCBI-ProteinID: XP_054861686
Ensembl: ENSAOCG00000014268
LinkDB
Position
20
AA seq 1108 aa
MSADVESSQVDSGLTAASSGDQNKSEGREKEEPGQKGSEKPPGDGQGSEAARSPADTHKN
CKENDKENDQSADSAVQAVKRKVVEAPPPKVNPWTKRTTGRVPVNSISSSQEKDQQNALK
VVRASKPRTRKSSKSSDFSDITNWPTPGELAKEVREVVARQQQNVLNNHGKKPPSSRREK
DKRRERPDRKSESSHDGGESKENQEAQPDPLADLPRDGESKAAHDAKSASLKKRGGEGNK
RKWVSLPLEEASRDDGDKTPGGDTNSDSPDPTSPNQTLHNNRAHDSSRSWRREPRDYGDD
ASSVRSDGGSVRGGIRGRGKGRGRGRGRGRGRYEYSLSFRDSQSSDGSVQVPSEFGTNMV
YYYDDGNKVQMYTVDEKLLKEYIKRQIEYYFSLHNLERDFFLRRKMDAQGFLPISLIASF
HRVQALTTDINLIMEALKSSTEVELVDDRVRCKSEPERWPILPAPTVVGSPRTDFSQLIN
CPEFVPRQTLNSASSPIKETLLESAKPQNSAGPSSSSSSSLPAADDSKDAPKPDPDAWIQ
VEKRHRYPSGKAKLVSDDVCVVGSPPLPPPSSSSPQPDQIPSPGDNKPPPLSLQAPPQAS
EPDQEELDFMFDEEMEQMAPRKNKFTDWSDEDDSDYELDDQDVNKILIVTQTPPYLRKHP
GGDRTGNHESRAKITTDLAKAINDGLYYYEQDLWKGEEQVEVSKQEVENFKKLNVISKDE
FDTLTPKAPVDPNQEVPPPPMPADSGVEMARSLPTSVPESPSTHQPRTPRTPRTPGRQDP
NKTPRFYPVMKESGTIDGQMPRKKKTRHSSNPPHEAHIGWVMDSREHRPRSASISSSNAS
PSEGAPLSGNYGCTPQSLPKFWHPSHELLRDSGFTQQGYHKYRRRCLNERKRLGIGQSQE
MNTLFRFWSFFLRDNFNRKMYEEFKQYALEDAKENYRYGLECLFRYYSYGLEKRFRLDLF
KDFQEETLRDFEKGQLYGLEKFWAFLKYSKIKNQPIDPKLQEHLSQFKNLEDFRVVPPMG
EEGGRRRRHSSSAGDEGRRRRHPSNSTSKPTQANKSSNTAAQPTSSSSTSSSNATTPKDN
AQKTAAAPSQGKQSDSKAGKKESVAPNK
NT seq 3327 nt   +upstreamnt  +downstreamnt
atgtccgcagacgttgagagcagtcaggtcgactcgggtttgacagcggccagctccggc
gaccaaaacaagtccgagggccgggagaaggaggaaccggggcagaagggctccgagaag
ccgccgggggacggccagggctccgaggcggccagaagccccgcggacacgcacaagaat
tgcaaagaaaacgataaagagaacgaccaaagcgctgactcggcggtgcaggcggtgaag
aggaaagttgtcgaagctccgccgccgaaagtgaacccgtggacgaagaggacgacgggc
agagtcccggtgaacagcatcagcagctcccaggagaaagatcagcaaaatgctctgaaa
gtggtgcgagccagcaaacccagaacgagaaaatccagcaagtcgagcgacttcagcgac
atcacgaactggcccacgcctggagagctggccaaagaggtacgagaagtggtcgcacgt
cagcagcaaaatgtcctcaacaaccacgggaagaagcctccgtcttcgcgtcgggagaag
gataagagacgagagcgaccggacaggaagtcggagagcagccatgacggcggcgagagc
aaagagaaccaggaggctcagccggacccactggcagatctgcccagagacggagagtcc
aaggcggctcacgacgccaagagcgccagcctgaagaagagaggaggtgagggtaacaaa
cgtaagtgggtttctctgccgctggaggaagcgtcccgggacgacggagacaagacgccc
ggcggggacaccaacagcgactcgcccgaccccacgtcgcccaatcaaacgctccataat
aaccgagcgcatgatagcagcaggagttggagaagagaaccgcgggattatggcgacgat
gcttccagcgtccggagcgacggcggcagcgttcgtggaggaattcgaggtcgaggaaaa
ggtcgcggacgtgggagaggacgtggacgaggtcggtacgaatattctctgagcttccgg
gactcccagtcctccgacggttctgttcaggttccctcagagttcggcaccaacatggtt
tattactacgatgacggcaacaaggtccagatgtacacagtggatgagaagctcctcaag
gaatacatcaaacggcaaattgaatactacttcagcctccacaacctggagcgagacttc
ttcttgaggagaaaaatggatgcacaaggcttcctccccatctccctcatcgccagcttc
cacagagtgcaggctctgaccactgatatcaacctcatcatggaggccctgaagagcagc
acagaagtggagctggtggacgaccgggttcgctgtaaatcagaacccgagcgttggccc
atcctccccgccccgactgtcgtgggttcccctcgtaccgacttctcccagctcattaac
tgtcctgagtttgttcctcggcagaccctcaattccgcttcatcgcctataaaggaaacc
cttctcgagtcggcgaagcctcagaactcggctggaccctcctcctcctcctcctccagc
ctcccggcagcagacgactccaaagacgccccgaagcctgaccccgacgcctggatccag
gtggagaaacgccaccggtatccttccggaaaggcaaagcttgtcagtgatgatgtttgt
gttgtcggttctcctcctcttcctcctccttcctcctcatcgcctcaacctgaccagatt
ccctctccaggagacaacaaacctcctccactcagcctccaggctcctccgcaggcctcc
gagcccgaccaggaggagctggacttcatgttcgacgaggagatggagcagatggcgccc
aggaagaacaagttcaccgactggtcggacgaggacgactcggactatgagctggacgac
caggacgtcaacaagatcctcatcgtcacccagactccgccgtacctccgcaagcacccc
ggtggcgaccggacgggcaaccacgagtcccgggccaagatcaccaccgacctggccaaa
gccatcaacgacgggctgtactactacgaacaggacctgtggaagggcgaggagcaggtc
gaggtcagcaagcaggaagtggaaaacttcaagaagctgaacgtcatcagtaaagatgag
ttcgacactctcacccccaaagcgcccgtcgaccccaaccaggaagtcccgcctcctccg
atgccagcggacagtggagtagaaatggctcgttctctgcctacgtcggtccctgagtcg
cccagcacccaccaacccagaacccccagaacgcctcggacgcccggacgccaggacccc
aacaagacgccccggttctaccccgtcatgaaggagagcggtaccatcgacggacagatg
ccgagaaagaagaaaacccgacacagttcgaaccctcctcacgaagcccacatcggctgg
gtgatggactcccgtgaacaccgaccgcgctctgcctccatcagcagctccaacgcctcc
ccatcagaaggagcgccgctgtcaggtaattacggctgcaccccccagtctctgcccaaa
ttctggcatccatcccatgagctgctgagggacagcggcttcacccagcagggataccac
aagtaccgccgacggtgccttaacgagaggaaacggttggggattggccagtctcaggag
atgaacaccctcttcaggttctggtccttcttcctcagggacaacttcaacaggaagatg
tatgaggagttcaagcagtatgcgctggaagacgccaaagaaaattacaggtacggtctg
gagtgtctcttcagatactacagctacggtttggagaagagattcaggttagatctgttc
aaggactttcaagaagagaccctcagggactttgagaaaggtcagttgtacggactggag
aagttctgggccttcctgaaatactcaaagatcaagaaccagcccatcgaccctaagctg
caggaacacctctcccagttcaagaacctggaggacttcagggtggtgcctccgatggga
gaggagggaggcaggaggagacgtcactcgtcctcggctggggatgaagggaggcgtcgg
cgacatccttccaactctacctcaaagcccacgcaggccaacaaatcctccaacacggct
gctcagcccacctcctcctcctccacctcctcctccaacgctacgacgcccaaagacaac
gcccagaaaacagcagccgctccatcccaggggaagcagagcgacagcaaggctgggaag
aaggagagcgtcgcccccaacaaatga

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