Amphiprion ocellaris (clown anemonefish): 111569458
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Entry
111569458 CDS
T06018
Symbol
snrpd2
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111569458 (snrpd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoce03041
]
111569458 (snrpd2)
03032 DNA replication proteins [BR:
aoce03032
]
111569458 (snrpd2)
Spliceosome [BR:
aoce03041
]
Complex A
U1 snRNP components
Sm proteins
111569458 (snrpd2)
U2 snRNP components
111569458 (snrpd2)
Complex B
U1 snRNP components
111569458 (snrpd2)
U4/U6.U5 tri-snRNP components
111569458 (snrpd2)
Complex C
U2 snRNP components
111569458 (snrpd2)
DNA replication proteins [BR:
aoce03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
111569458 (snrpd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
GIT1_C
Motif
Other DBs
NCBI-GeneID:
111569458
NCBI-ProteinID:
XP_023127398
Ensembl:
ENSAOCG00000025747
LinkDB
All DBs
Position
7:complement(14028978..14031908)
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AA seq
118 aa
AA seq
DB search
MSLLTKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPLITGK
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgttaacaaagcccaagtctgagatgactcccgaggagctccagaagcgagag
gaggaggagttcaacaccggccccctctcggtgctaacccagtcagtgaagaacaacact
caggtcctcattaactgccgcaacaacaagaagctgctcggaagagtcaaggcttttgac
agacattgcaacatggtcttggagaatgtgaaggaaatgtggacggaggttcccaagagc
gggaagggaaagaagaagtctaagcccgtgaataaggaccgctacatttctaaaatgttc
ctcaggggggactcggtcatcgtcgtgctgagaaatcctctgatcacaggaaaatga
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