Amphiprion ocellaris (clown anemonefish): 111569459
Help
Entry
111569459 CDS
T06018
Symbol
vars1
Name
(RefSeq) valine--tRNA ligase isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
111569459 (vars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
aoce01007
]
111569459 (vars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aoce03016
]
111569459 (vars1)
Enzymes [BR:
aoce01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
111569459 (vars1)
Amino acid related enzymes [BR:
aoce01007
]
Aminoacyl-tRNA synthetase
Class I (U)
111569459 (vars1)
Transfer RNA biogenesis [BR:
aoce03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
111569459 (vars1)
Prokaryotic type
111569459 (vars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
GST_C_2
Arc1p_N_like
GST_C_3
tRNA-synt_1e
Spectrin_Anc-1
Jag_N
GST_C_7
Motif
Other DBs
NCBI-GeneID:
111569459
NCBI-ProteinID:
XP_023127360
Ensembl:
ENSAOCG00000002447
LinkDB
All DBs
Position
9:complement(22422424..22434438)
Genome browser
AA seq
1286 aa
AA seq
DB search
MLTKLTSLSVSFKEMATLYVSPHPDDFRSLLALIAAEFGLSSRPNIVTEDPPASLNARSR
PALVLGTGEDCSVLSGTSAVSWYLAYQGKRTGIDVKQQSQVWQWLSFADNELIPVSCAVV
FPLMGVIGVDKKVQQSSHAELMRVLKVLDQALEPRTFLVGESITLADMAVATAVLLPFKY
ALEPSDRETLTNVTRWFTTCINQPQFMKVLGQITLCEKMVPVTLKTNVAENTSAAADSNG
STANGPPKTEAQLRKEAKKKEKMEKFQQKKEMEAKKKTQPVKEKKAKPEKKELGVITYSV
PTPAGDKKDVVSPLPDSYSPQYVEAAWYSWWEKQGFFKPEYGRKSISEPNPRGIFMMCIP
PPNVTGSLHLGHALTNAIQDCLTRWHRMRGETSLWNPGCDHAGIATQVVVEKKLMRERGM
SRHELGRENFIQEVWKWKNEKGDRIYHQLKKLGSSLDWDRACFTMDSKLSYAVQEAFIRM
HDEGVIYRSKRLVNWSCTLNSAISDIEVDKKELTGRTLLPVPGYKEKVEFGVLVSFAYKV
DGSDEEVIVATTRIETMLGDTAVAVHPADPRYQHLKGKMVLHPFCDRKMPIVFDDFVDMN
FGTGAVKITPAHDHNDYEVGERHNLTFINILDENGLLINVPPPFLGMKRFEARKAVLQSL
KDRGLFKEIKDNPMVVPVCSRSKDIVEPLLKPQWYVNCTDMGKQAADAVRDGSLKIIPDH
HLKTWFNWMDNIRDWCISRQLWWGHRIPAYFVTVSDPSVKPGEDMDGHYWVSGRSEEEAR
EKAAKRFNVSVDKITLRQDEDVLDTWFSSGIFPFSIFGWPNETQDLNVFYPGTLLETGHD
ILFFWVARMVMMGLKLTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGISLEG
LHAQLTDSNLDPLEVEKAKQGQKSDYPNGIPECGTDALRFALCAYTSQGRDINLDVNRIL
GYRHFCNKLWNAVKFAMKTLGDNFVPLEKAQLSGEESVSDRWILSRLSAAVGLCDAGFKA
YDFPGITTAIYNFWLYELCDVYLESVKPVFSKAEEDSTSQRQALVCRQTLYTCLEVGLRL
LSPLMPFVTEELYQRLPRRQPQRDPPSICVTSYPDTEEFCWHSEEVDRDMEFIMTVVKTI
RSLRADYNLTKTRADCYLQCIDSATASLVQKYSLQIQTLSYSQAIIPLTANQPVPEGCAV
AIASDRCTVNLMLKGLIDVEKEVAKLMTKKGDLEKQMEKLRENMAKSDYKEKVPVKVQEQ
DAEKLRQSQTELEKVKEAMDNFRKMM
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgctaactaagctgacgtctctttctgtttcgttcaaagagatggccactctctacgtt
tcccctcatcctgatgactttaggagtcttttggctctcatagctgcagagtttggtctg
tcctcccgaccaaacatcgtaacagaggatcctcctgcgtctctgaatgcccgctcaagg
ccagccctggtgctgggtactggggaagattgctctgtcctgagtgggaccagtgctgtg
tcttggtacttggcttatcagggcaagaggactggtatagatgtcaagcaacagagccag
gtgtggcagtggctcagctttgcagacaatgagctcatcccggtatcctgtgctgtggtc
tttcctctgatgggggtgataggagtggataaaaaggtccagcagagctcccatgctgag
ttgatgcgtgtgctaaaggttctcgatcaggccctggaaccaagaaccttcttggtggga
gagagcattaccctggctgatatggctgtggctacagctgttcttctgcctttcaaatat
gcactggagccgtcggacagggagaccttgaccaatgttaccagatggttcacaacctgc
attaatcagccacagttcatgaaggtgctggggcagatcactctttgtgagaagatggtg
ccagtgacattaaagacaaacgttgctgaaaataccagtgctgcggctgactctaatggt
tccacagctaacggcccaccaaagacagaggcccagctgagaaaggaagcaaagaagaag
gagaagatggagaaatttcaacagaagaaggaaatggaagcaaagaaaaagacgcagcca
gtaaaagagaaaaaggccaaacctgagaagaaggaattgggagtgattacatacagtgtc
cctactcctgctggggacaaaaaagatgttgtcagtcctcttcctgactcctatagtcct
cagtatgttgaggctgcttggtattcatggtgggagaagcagggattcttcaagcctgag
tatgggaggaagagtattagtgagccaaatccacgtgggatcttcatgatgtgcattcct
ccacctaatgtgactggatcacttcacttgggtcatgctctcaccaatgctattcaggac
tgtctgaccagatggcacaggatgcgaggtgagacaagcttgtggaacccaggctgtgac
catgctggcatcgccacccaggtggtggtggaaaaaaaactgatgagagagaggggtatg
agtcgccacgagctgggaagggaaaacttcattcaggaagtctggaaatggaagaatgag
aagggagaccgtatctaccaccagctgaagaaactgggctcttctcttgactgggacaga
gcatgctttactatggactctaaactttcctatgcagtccaagaggcttttatccgcatg
catgatgagggagtgatctacaggagcaagaggctggtcaactggtcctgcacgctaaac
tctgctatctctgacatagaggtggataaaaaggagctcactggcaggacattgttgcct
gtgcctggctacaaggagaaagtggagtttggtgtcttagtgtcttttgcctacaaagtt
gatggatcagatgaggaggtaattgtggctacaactcgtattgagacgatgctgggagac
acagctgtagctgtccaccctgctgacccaagataccagcatctaaagggaaaaatggtg
ctccaccccttctgtgaccgcaaaatgccaatagtcttcgatgactttgtggacatgaac
tttggaacaggcgctgtcaaaatcaccccagcccatgaccataatgactatgaggttgga
gagagacacaatctgaccttcatcaacatcttggatgagaatggcctgctcattaacgtg
cctcctcccttcctgggcatgaaacgtttcgaggccagaaaagcagtgcttcagtctctc
aaggacagaggcctctttaaagagatcaaagacaaccctatggttgtcccggtctgcagt
cgttccaaggacatcgtggagccactgcttaagccacagtggtatgtgaactgcacagat
atgggcaagcaggctgcagacgctgtcagagatggcagcctcaaaatcatccctgatcac
cacctcaagacatggttcaactggatggacaacatcagggactggtgcatctctcgacaa
ctctggtggggtcatcgaattcctgcttacttcgtcactgtcagtgatccttctgtgaaa
ccaggagaggacatggatggtcattactgggtgagtgggagatcagaggaagaggccaga
gagaaggcagcgaaacgcttcaatgtgtctgttgacaaaatcacactcagacaggatgaa
gatgttctggacacttggttctcatctggcatattccccttctctatcttcggatggcca
aatgagacccaggacctgaatgtgttctaccctggcaccttgctggagacgggccatgac
attctgttcttctgggtggcccgcatggtgatgatgggcctgaaactgacaggcaaactg
cccttcaaagaggtttatctgcatgcagtggtgcgggatgctcacggaagaaagatgagc
aagtctctgggcaacgtcattgaccctctggatgtcattacagggatctccctagagggt
cttcatgcccagttgacggacagcaacttagatcctttggaggttgagaaggcaaagcaa
gggcagaagtcagactacccaaatggtatcccagagtgtggcacagatgctctccgcttt
gccctgtgtgcctacaccagccaaggtagggatatcaacctggatgtcaaccgcattctg
ggttaccgacacttctgtaacaaactgtggaacgctgtgaagtttgccatgaagacgctg
ggagacaactttgtaccactggagaaagcccagttgtctggagaggagagtgtatcagac
aggtggattctgtccaggctcagtgctgctgttggtctctgtgatgctggcttcaaggcg
tacgattttccaggaatcaccactgccatctacaacttctggttatatgaactgtgtgat
gtatacttggaaagtgtgaaaccagtgttcagtaaagcagaggaagacagcaccagccag
agacaagcgctggtgtgcagacagaccctgtacacctgtctagaggttggtctgcgcctt
ctgtctcccttgatgcccttcgtcactgaggagctctaccagaggctgccacgacgacaa
cctcagcgtgatcccccgagcatctgcgtcacatcataccctgacaccgaggagttctgc
tggcacagtgaggaggtcgaccgggacatggagttcatcatgactgtggtcaaaacgatc
cgatcactcagggccgactacaacctaacaaagaccagagctgactgctacctccagtgc
atcgactctgctactgcatcactggtgcagaaatacagtctgcagattcagaccttgtct
tattctcaagccatcatcccgctgacagccaaccagcctgtcccagaaggctgcgctgtg
gccatcgcttctgacagatgtaccgtcaaccttatgctcaagggtctgattgatgtggag
aaggaagtggcaaagctgatgacaaagaaaggtgacttggagaaacagatggagaagctg
agagagaatatggcaaagagcgactacaaagagaaggtgccagtgaaggtgcaggagcaa
gatgcagagaagctacggcagagccaaaccgaacttgagaaagtgaaagaagccatggac
aacttcaggaaaatgatgtaa
DBGET
integrated database retrieval system
