Amphiprion ocellaris (clown anemonefish): 111569529
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Entry
111569529 CDS
T06018
Symbol
prdm1a
Name
(RefSeq) PR domain zinc finger protein 1a isoform X2
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111569529 (prdm1a)
Transcription factors [BR:
aoce03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
111569529 (prdm1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
Zf-C2H2_ZNF451_C
zf-C2H2_4
zf-C2H2_6
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
zf-met
zf-C2HE
B129_C2H2-zf
FOG1-like_PR
MmgE_PrpD_N
Motif
Other DBs
NCBI-GeneID:
111569529
NCBI-ProteinID:
XP_023127464
Ensembl:
ENSAOCG00000006625
UniProt:
A0AAQ5XBJ6
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Position
9:16969445..16995258
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AA seq
854 aa
AA seq
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MCGWDQSYTATSHSSAMLTSEGAHTMEQDDTHHRAKIASTATSTGSDGAETMTDTDVDME
MDMEEADMTQWTETEFEEKCTYIVKDTAWEAGPDGDAMMTTRAEASLPRNLAFKHLAGSK
EVVGVCSREYIPKGTRFGPLVGEIYTADSVPKDANRKYFWRIYADGEFHHFVDGLDETRS
NWMRYVNPAHSAAEQNLAACQNGMEIYFYTVKPVPAGAELLVWYCHDFARRLHYPPSGEL
MMQKLKQSLLEVKQQQVSSEERSVQASSPSLVAVTPTQPKREHSVLSILQGTNSTSSSSS
TKREPSRPLPTRPRCADSPERPLYPRALYPALRPHPHISEDFLSHKPGPLGYPSTHSPGN
QSSATPSPSARSSPDISPHGSPSGPAPSPASFYSTGLGSYPSYSPPSAPLASPFYPPGAP
YSRYLLPHHYPLPSGGVPAVGSIFPRMYPLYSSLLPPHVPLLPSDTAGRRFLMPDPVHSS
SISTHRDFLLPGPTSAFSAATSLRDKAGPHNPYHGHPHPHGPAHAPSSGSPTAGTAPPSE
QLPTKPTSALLGNTSEHHPDEEAINLTKVKRGAGSAGYKALPYPLKKQNGKIKYECNVCS
KTFGQLSNLKVHLRVHSGERPFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFS
STSNLKTHLRLHSGEKPYHCKLCPAKFTQFVHLKLHKRLHSRERPHKCLHCHRHYIHLCS
LRLHLKGYCLAAHPNSGSPSVSSQAALEEVHRANEEIERFDVSEHAERLEQLQGGVEMEA
MLEKQVLGMLWRETDLKSSHFRSHHKGSTAELLSAGYGAYESPNETSVIKVRRSSPIPPL
PANITVKQESEDHS
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggatgggaccaaagttacacggcgacctctcatagctcggccatgttgaccagt
gagggggcgcacaccatggagcaggacgacacgcaccacagagccaagatagcctccacc
gccaccagcacgggttcggatggagccgagaccatgacagacactgacgtggacatggag
atggatatggaagaggcagacatgacacaatggacggagacggagttcgaggagaagtgc
acgtacatcgtcaaagacacggcgtgggaggcggggccagacggtgatgccatgatgacg
accagagctgaagcgtctctgccgcgaaacctggccttcaaacacctggctggcagcaag
gaggttgtcggcgtgtgcagcagggagtacatccccaaaggaactcgcttcggtcccctg
gtgggtgagatctacacggcagacagcgtccccaaagacgctaaccggaagtacttctgg
aggatctatgcggatggggagtttcaccactttgtcgacggcctggatgagactcgctcc
aactggatgcgctacgtgaacccggcccactcagcggcggagcagaacctggcagcgtgt
cagaatggcatggagatttatttctacacggtgaaacccgtcccggctggcgctgagctg
ctcgtctggtactgccacgacttcgcccgacgcctgcactaccctccgtccggggagctg
atgatgcagaaacttaagcaatcacttttggaggtaaagcagcagcaggtgagcagcgag
gagcgctcggtccaagcatccagcccgtcccttgtcgcggtgacccctacccagcccaag
agggaacacagcgtcctttccattctgcagggcaccaacagcacctcatcctcctcatcc
accaagagggagcccagcaggccgcttcccacccgtccacgttgtgctgacagccctgag
cgtcccctgtatccccgtgccctctacccagctctcaggcctcaccctcacatctctgaa
gacttcctgagccacaaacctggtccacttggttacccttcaactcattcccctggcaac
cagtcttcagccacacctagcccatctgcaaggagcagcccagacatcagccctcatggt
agcccctctggaccagcaccgtcccctgcttctttctactcgaccggactgggttcctac
cctagctactcgccaccatctgcccccctcgcttcacccttctaccctccaggggccccc
tactcacgttacctccttccccatcactatcctctgcctagtggtggcgtccctgcagta
ggaagcatctttcctaggatgtacccgctctacagcagcctcctgcctcctcatgttccc
ctcctgccttctgacacagcagggaggcgcttcttgatgcctgaccctgtacactcctcc
tccatctcaacccacagagacttcctccttcctgggcccaccagtgccttctcagccgct
acttctctgagagacaaagcagggcctcacaacccttatcatgggcaccctcacccacat
ggaccagcccatgccccctccagtggctccccaactgcaggcacagcacccccaagcgag
cagttgcccacgaagcctacctcagccctgctgggcaacaccagcgaacatcaccctgat
gaagaggcaatcaatctgaccaaggttaagcgtggtgcaggctcagctggttacaaggcg
ctgccttaccctctgaagaagcagaatggcaaaatcaaatatgagtgtaatgtgtgcagc
aagactttcggccagctgtcaaacctgaaggttcatcttcgcgtccacagtggagagaga
ccttttaaatgtcaaacctgtaacaaaggctttactcaactggctcacctgcagaaacac
tacttggttcacacaggggagaagccacatgagtgtcaggtttgtcataagcgtttcagc
agcaccagcaacctgaaaactcacctgcgcctccactcaggggagaagccctaccactgc
aaactctgtccagctaagttcacccaatttgtccacctcaagctgcacaagcgcctgcac
tcccgtgagcgtccacataaatgcctccactgccatcgccactacatccacctgtgtagc
ctgcgacttcacctgaagggttactgcctggcagcacaccccaactctggcagtccctct
gtctctagccaggccgccttggaagaagtgcaccgcgccaacgaggagattgagcgcttc
gacgttagcgagcatgctgagcggctggagcagctgcagggaggagtggaaatggaagcc
atgttggagaagcaggtcttggggatgctgtggagggagactgacctcaagtcctctcac
ttccgttcccaccacaagggcagcaccgccgagcttctgtctgcaggttatggcgcgtat
gagtccccgaatgagacgtcggttatcaaggtgcggcgcagcagccccatcccaccactt
cctgccaacatcaccgttaagcaggagtcagaggatcactcttaa
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