Amphiprion ocellaris (clown anemonefish): 111569548
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Entry
111569548 CDS
T06018
Symbol
cdx1a
Name
(RefSeq) homeobox protein CDX-1a
KO
K09312
homeobox protein CDX1/4
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111569548 (cdx1a)
Transcription factors [BR:
aoce03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
111569548 (cdx1a)
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GFIT
Motif
Pfam:
Homeodomain
Caudal_act
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
111569548
NCBI-ProteinID:
XP_023127495
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Position
13:complement(20281734..20286735)
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AA seq
227 aa
AA seq
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MYPNPQSVRHPAQALPLNSQYISPSYDFAGYHHHVSGVGDLSASAWNSVYSSREEYPYSF
AGSSPSAAQVTFTSPELSGAPSAAGEGSLTPYSFIPGQDPFSSRRRPHDSTRQTLSGGKT
RTKDKYRVVYTDHQRMELEKEFQYNRYITMRRKSELSMALSLSERQVKIWFQNRRAKERK
ITKKRLQQSQQASTTTPTPPVLGGVTDTHNTTSPRSDVLSDIKSEEY
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtaccccaaccctcagtcggtgagacacccggctcaggcgctgcccctgaacagtcag
tacatctcaccttcgtatgacttcgccgggtatcatcatcacgtctctggagtcggtgac
ttgtccgccagcgcctggaactccgtatacagcagccgggaggagtatccgtacagcttc
gcgggttcgagccccagcgccgcccaggtcacttttacctccccggagctgagcggggcg
ccttccgccgctggagaggggtccctcaccccctacagcttcatccccgggcaggacccc
ttcagctccaggaggaggccccatgactccaccagacagacactttcaggagggaagact
cgcactaaagacaagtacagggttgtgtacaccgaccaccaacggatggagctggagaag
gagtttcagtacaaccgctacatcaccatgaggaggaagtcggagctgtcgatggcactc
agcctctccgagagacaggtgaaaatatggtttcagaacagacgtgccaaagagaggaag
atcaccaagaagaggctgcagcaatcccagcaggcttccacaactacacctaccccacct
gtgctgggtggagtcaccgacacccacaacaccaccagccccaggagcgacgttttgtca
gatataaagtcggaggaatactag
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