Amphiprion ocellaris (clown anemonefish): 111569752
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Entry
111569752 CDS
T06018
Name
(RefSeq) polycystic kidney disease 1 like 1
KO
K04987
polycystin 1L1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
aoce03037
]
111569752
04040 Ion channels [BR:
aoce04040
]
111569752
Cilium and associated proteins [BR:
aoce03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
111569752
Ion channels [BR:
aoce04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
111569752
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REJ
Polycystin_dom
PLAT
PKD_channel
GPS
Motif
Other DBs
NCBI-GeneID:
111569752
NCBI-ProteinID:
XP_054863081
LinkDB
All DBs
Position
22
Genome browser
AA seq
1970 aa
AA seq
DB search
MSAGRPTDVDGETFSPGDDSAFDPATHQDEGSNLVDPKPSLVVQKPSLLDLPRHPVDRGL
FQSYAYTGNSSSSLIFRPFSLKPGSRYMLEVAAKSPNSILGRTQLFLQTNPVPKGMTCQV
QPAKGIEIHTHFSIFCTSGREDLLYEYSFSMGGRPRRTLYQGRDFQHYFSLPSGDPSDDY
KVTIFTEIRSGTSGSATKPCPVTVQVQPSFLRRTSSSSSGHDPDLELSESGLRNLSSLVQ
LGNTAEIRNYVSLLSIILNRLSLDAEANTQVQSYLRNVLICTVCELEQVSITDNIYILED
LLQVTCQVTLMSARRVTAQVQSVSEQFSESSPPDYTNQKMLSSLISLLSYSLQAVINCSF
TPETPNNVDITQALESHTGRKDAPNSCLHDSSAGPHTRQRTSTPTKPVVQLVTDTLQTAS
DLMLKSIQFHETKELSVSTGLMTLYAASQNQTSTVISSGSTTFHMPDSLIQILFNHHGGV
TDRFQHRPCVIVVLTELSRSPFTWASYPAQLSGPLVDLSLYKCNTRRKIPVRSLIQPIIT
ELHHRQRNRSSVSEYILLRSQVNYHSFNITQEHLQQAIQLTVEFRPPSTKAFPIMLLFRM
FEKPTPSMHHLQRVHRWKSNTTHITLPPSYLNAAGVGHFALLNADFGKAPRSKHLSEQIS
YSLTVDSSLCLSWDSQQGAWTHHGCKTQQADTSLAVKCSCHQLRPLTVMQQQIQSSHETA
DLDPFLSASSDLTVLVVLMLCLCLYIPGLVACKRADVVSEENRRIHHLSDNPPSDPHLYA
VTVHTGLWSAAHMSAKVYIVLYGENGTSQTRELQVPRCTLFRRNSQDTFIVSSADSLGPL
WGVHIWHDNSGPSPEWYLKQVEVSEVSRGCVRRWLFVGQCWLAVNKSDGRVERELCVCTQ
GLGFAKMLGLKLSEYMTDFHIWMSVYSCPCPNSFTHTQRLTMCLLLLLGYACVNTVIISQ
MEDQLLFIDMSAVSVTTGLLSVFAVLPGATVVSLLFRMREVKLKGSGVQHAKSKIAEKDC
FEVNEFESHLSWSSCQQWDTYRKKYQDADLQSVFTTFPENKDTDKEPIFQPDVGDVALDS
SVGPAIQKLLLISKGTDADRAALGKDFELLTEGNRFNGTHKGCLTGTRHEDEEEVQQEKD
THERCSSDCRFEEGSHIQTARPGQQRERRFRPTSQWCHRLAWTLCLLLSLSCLVLSAVLG
MRFSSSKALLWIHSLFFSLMSCIFLIQPAVILTAAVAVSCWYRKRSDFYSFSSLEALKMW
RHTNQPEEQITSSAFPQRRCSYLDKLLGARRRARFLRLVRPPTPAELRKSRRKKRRDTLM
YKTLRDLSLCVFMLLLMMCITYSSSFSDHYHLNRAVRRHFMGNHDNAFMSIQTHEDWWKW
TQTSLPDLLYKSASSKTESYIVIGDPILQKMEVSDTFQSKVSMVTLPRLCGPLGCCSGPN
ATVGLGHTKSDAASKLKLLRSGGWLGGQTVALKVQFTLYSPATNLFTSVTLLTEQSPAGV
LLPSAKVQSVRLYHTAAVWDYVVMVCQLFFFVLSLLQICLQVSSISQHGVMGYLRKLCNL
VEVSLLTVTIVYYVYHIHHSIVVTEVVELLQRHSYRGHVDVGLLATWEQCIRTLQGIMVF
LLTVKCVTVLRLNRTLAVSATLFAHSLSSLLWPAISGLILLVALSCVGNLLYVQNSCSFG
SVLSAFWSLLCRHRGLGVNNRHLLFSGRDFFYYGVLCLTSTLVWAAMVIGVVSSLARAVK
RCQSRRNIFTMAELASYIRQRVSDFTGRNRRASTSNSEEQRIYYLEEFESSVDELLFRLN
ALSSSLHHTLPPKAHRYREEDSPIISPISEPSDMDPQDSVGSQMMMMKDAAGIGGHTVSN
LGETPPSPHLVSSHAELNILQVLQQRSKMRHNPSSDNVVASNYKLKDESRLSCPEPASLK
RLWKGDVLERQADQQSKTNDWLSETQPAHTEVVVEVLVHDEHGRVEPDIH
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaggaagacccacagatgtagatggtgagaccttcagtccaggagacgactca
gcgtttgatccagcaacacaccaagacgagggcagcaatctggtggatcccaaaccatct
ctggtggttcagaaaccgagtttgctcgacttacctcgacacccagtggacagaggcctc
ttccagtcctacgcttacacgggaaactcctcctcttcgctcattttcagacccttcagt
ctgaagccggggagcaggtacatgttggaggtcgctgccaaatctccaaacagcattctg
ggccggactcagctgttcctacaaaccaaccctgttccaaagggcatgacgtgtcaggtg
cagccagctaaaggaatagaaatacacacacacttcagcatcttctgcacatcagggaga
gaggatttactgtatgagtacagcttcagtatgggaggccgaccccgcaggacgctgtac
caggggagagacttccagcactacttcagccttccatcaggcgaccccagtgatgactat
aaagtcacaatttttactgagatcagaagcggcacatcagggtctgccaccaaaccctgt
cctgtcaccgtccaagtccaaccgagcttcctcagacgcacctcatcttcctcttcaggt
catgatcctgatctggagctttcagagtcaggtttgaggaacctgtcgtctctggtgcag
ctcggaaacaccgcagagatccgtaattacgtcagtctcctctccatcatcctgaacaga
ctcagcctggacgctgaggccaacacacaagtacagagttacctgcgcaacgtgctaatt
tgcacagtttgtgagcttgaacaggtttcaataacagacaacatctacatcctcgaagac
cttcttcaagttacttgtcaggtgacattaatgagtgccagacgagtaacagctcaggtt
cagagtgtctcagagcagttttctgagtccagtcctccagattataccaaccagaagatg
ctcagctctctcatcagcctgctttcatacagtcttcaggcagtcattaactgcagcttc
acacctgaaacacccaacaatgttgacattacacaagcattggaatcacatactggtaga
aaagatgctcctaattcctgtttacacgactcttccgctggtcctcacaccagacagcga
acatcaactccaacaaagccagtggtgcaacttgtgactgatactctgcagactgcttca
gacctgatgctgaagtccattcagttccatgagaccaaggagctcagtgtgagcactggt
ctcatgactttgtacgctgcatcccagaaccaaacctccacagtcatcagcagcggctca
accactttccacatgcctgattctctgatccagattctgtttaatcatcacggtggagtc
actgaccggtttcagcatcgaccatgtgtcatcgtagtgctgactgaactttcccgcagc
cctttcacctgggccagctatcctgcacagttgagtggaccactggttgacctgagtcta
tacaagtgcaacaccaggaggaagatccctgttcgctccctcattcagccgatcatcact
gagctgcatcatcgacaaagaaacaggagctctgtcagtgagtacatcctcctgcgcagc
caggtcaactaccacagcttcaacattacccaggagcacttgcagcaggccatccagctg
actgtggagttcagaccaccatccaccaaggcctttcccatcatgctgctcttcaggatg
ttcgagaagccaactcccagcatgcatcacctgcagagggttcaccgctggaaaagcaac
acaacacatatcactctaccaccatcctacctcaatgctgcaggggtcggtcactttgct
ctgctcaacgctgattttgggaaagcacccagaagcaagcacctgagcgaacagataagc
tacagtctcacggtggacagcagcctgtgtttgtcctgggacagccagcagggggcctgg
acacaccacggctgcaagacacagcaagcggacacaagcctcgcagtcaagtgcagctgc
caccagttgaggccgctgactgtgatgcagcaacagatccagagcagccatgaaacagct
gatctggacccattcctgagtgcatccagtgatctgacagtgctggttgtgctgatgttg
tgtttgtgcctgtacatcccggggttggtggcgtgtaagagagctgatgtcgtttctgag
gagaaccgaagaatccaccacctttctgacaatcctccatcggatcctcatctctacgct
gtcaccgtccacactggtctctggtctgcagcccatatgagtgcaaaggtttacatagtg
ctgtatggtgaaaacgggacctcgcagacgagagaactacaagtcccaagatgcactctg
ttcaggaggaactctcaggacacctttatagtgagctcagcagacagcctgggccctctg
tggggggttcacatctggcatgacaactctggaccctccccggagtggtacctcaaacaa
gtggaggtgtctgaggtgagcagagggtgtgtgaggagatggctgtttgtcggtcagtgc
tggttggctgtgaataaaagtgatggccgagtggagagggagctatgtgtttgcactcaa
ggactaggctttgctaagatgttgggtctcaagttatctgaatacatgaccgatttccac
atctggatgtctgtgtacagctgcccctgccccaactctttcacacacacccaaagactt
accatgtgtctactgctgctgttgggttatgcatgtgtcaacaccgtcatcatatcacaa
atggaagaccagttgctgtttatcgatatgtcagctgtttctgtaacaacgggactttta
agtgtgtttgctgtgttgcccggagcaacagtggtatctttgctgtttcgaatgcgtgag
gtcaagctgaaagggtcaggagtccaacatgcaaagagcaaaatagctgaaaaggactgt
tttgaagtgaatgaatttgagtctcatctctcctggagcagctgtcagcagtgggacacc
tacaggaagaaataccaggacgcagacctccagtcagtgttcactacgtttccagaaaat
aaggacacagataaagaacccattttccaaccagatgttggtgatgtagcattagacagc
agtgtggggccagctattcaaaaactgttgctgatttctaaagggactgatgcagatcga
gcagctctgggaaaagactttgagcttttaactgaaggcaacaggtttaacggaacccac
aaaggttgtctgactggtacaagacatgaagatgaagaggaggttcaacaggagaaagac
actcatgaaagatgttcatcagactgtcgctttgaggaaggaagtcatatccaaacagca
agacctggtcaacagagagagagacgattcagaccgacatcccagtggtgtcaccgtttg
gcctggacactgtgtctgctgttgtctctctcctgtttggtgctttctgcagtgctggga
atgagattcagcagcagcaaggctctgctttggattcattctcttttcttctctctgatg
tcttgcatcttcctcatccagccagctgtgatacttaccgcagctgtggctgtctcctgt
tggtacagaaaaagatccgacttttatagtttctctagtcttgaggctttaaaaatgtgg
agacacactaatcaaccagaagagcaaatcacatcatctgctttcccccagagaagatgc
tcataccttgacaagctgctcggagctcgtcggcgagctcgcttcctgcgtctcgtgcgc
ccacctactccggccgagttgaggaaaagtcgtaggaagaaaagacgagacactctcatg
tataaaacactgagggatttgtctctctgtgtcttcatgcttctcctgatgatgtgtatt
acctacagcagctcattcagtgaccattaccacctcaacagagctgttagaagacacttt
atgggaaatcatgataatgcttttatgtctatacaaacgcatgaggactggtggaaatgg
acacagacaagtctgcctgatttactgtacaagagtgcatcatccaaaacggagtcatat
attgtgattggagatccaatcctgcagaaaatggaggtgtccgacacatttcagagtaag
gtttccatggtaacactgccaaggctatgtggtcccctgggctgctgctcaggaccgaat
gccacagttggcttaggccacacaaaatctgacgctgcatcaaaactgaagcttctgcgt
tcaggtggctggctgggtggacagacggtggccctgaaggttcagttcaccttgtacagc
cctgcaacaaacttgttcaccagtgtgacgctgctcactgagcagagccccgctggagtc
ctgctgccttctgccaaagtccaatcagtcagattgtatcacactgctgctgtctgggac
tatgttgttatggtctgccagctcttcttcttcgtcttgtctctactacaaatctgtctt
caagtgtccagtatatcacaacacggggtgatgggatacttaaggaaactttgcaacttg
gtggaagtcagtctgctgacggtgactatagtgtattatgtctatcacatccatcactcc
attgttgtcacggaagttgtggagctgctgcagagacacagctacagagggcatgttgat
gtcggcctcctggctacctgggaacaatgtattcgtactctgcagggcattatggtcttc
ctcctcactgtgaagtgtgtgactgtgctgaggctgaacaggaccttggctgtctctgct
acactatttgcccactcactctccagcctcttatggccagcgatttcaggtctgatccta
ctggtggcgctgtcctgtgtggggaatctgctctatgtacaaaactcctgctccttcggc
tctgttctcagcgccttttggtctctgctctgtcgccatcgaggtcttggagtcaacaac
aggcacctcttattctccgggcgtgatttcttttactatggagttctgtgtctgacctcc
actctggtgtgggcagcaatggtgatcggtgtggtgtcctcattggccagagctgtcaaa
agatgtcaaagcaggaggaacatcttcaccatggcagaactggccagctacattagacag
agagtctctgatttcactgggaggaatagacgggcatcaaccagtaacagtgaggagcag
aggatatattaccttgaggagtttgaaagctcagtggatgagctgttgttcagactcaac
gctctctccagcagcctgcaccacactctgccccccaaagcccatcgctacagagaggag
gacagtcccatcatctcacccatatctgaaccctccgacatggacccacaggactccgta
gggtcacagatgatgatgatgaaagatgctgctggtattggaggccacactgtgtcaaat
cttggagaaaccccaccttcacctcatctggtcagctctcatgctgaactgaacatcctg
caggtccttcagcagagaagcaaaatgagacacaatccctcctcggacaatgttgtggca
tctaattataaattaaaggatgaaagccgtctgtcttgtccagagccagcatcacttaaa
agactttggaaaggagatgttctagagaggcaagctgaccaacagagtaaaacaaatgac
tggttaagtgaaactcagcccgcccatacagaggtggtggtggaggttctggttcatgat
gaacatgggagagtagagccagatatccactag
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integrated database retrieval system
