Amphiprion ocellaris (clown anemonefish): 111569940
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Entry
111569940 CDS
T06018
Symbol
stxbp5a
Name
(RefSeq) syntaxin-binding protein 5a isoform X3
KO
K08518
syntaxin-binding protein 5
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoce04131
]
111569940 (stxbp5a)
Membrane trafficking [BR:
aoce04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
111569940 (stxbp5a)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
111569940 (stxbp5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Lgl_C
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
Beta-prop_VPS8
Synaptobrevin
VPS8_N
CFAP43_N
WD40_like
Motif
Other DBs
NCBI-GeneID:
111569940
NCBI-ProteinID:
XP_023128172
Ensembl:
ENSAOCG00000016127
LinkDB
All DBs
Position
12:4539530..4648693
Genome browser
AA seq
1091 aa
AA seq
DB search
MKKFNIRKVLDGLKEVSSSAPSVQVGPQENHLIQETLQSEHFQLCKTVRHGFPYQPSSMA
FDPVQKILAIGTQSGALRLFGRPGVECYCQHESGAAVIQLQFLINEGALVSALADDSVHL
WNLRQKRPAILHSLKFNRERITFCHLPFQSKWLYIGTERGNIHIVNVESFMLSGYVIMWN
KAIELSSKAHPGPVVHISDNPMDEGKLIIGFESGIVVLWDLKSKKADYRYTYDEAIHSVA
WHHEGKQFICSHSDGTLTIWNIRGQGKPMQTITPHGKQPKDGKKPEPCKPILKVEYKTTR
NGEPFIILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEPYA
VVVLLEKDLVVIDLAQNGYPIFENPYPLTIHESPVTCCEYFADCPVDLIPALYSVGSRQK
RQGYSKKEWPISGGNWGQGTQSYPEIIITGHADGTVKFWDASAIMLQVLYKLKTAKIFDR
NRSKEDKGSTEASDDDPFAIQIMAWCPESRMLCVAGVSANVIIYRFSKLEVTTEVVQLLE
VRMQYELNDIESPDGGGEQTSALPTPGASPQTSGPPSHPSTSSNNSDGGNMPCLKVRSAP
LKQSPGYQVDLVVQLVWVSGEPPQPITSLALNSSYGLLVFGNSSGLAVVDYVQKTVVLNL
GTVELYGSNDPYQRQPRSPRKTRQPSGGLCDINEGSATCEDRCKSPTSDHRDNSFSRSRS
SSVTSIDKEAREAISSFHFCETFARKGDSTLTPCLYVGTSLGTVLVLALTLPPAGEQRQL
QPVLISPTGMLARLKGSILRMAFLDSTGSQLPPAYEPWYEPNVSADGEEREKVRKRRPVS
VSPSSSQDLSESQYAVVCSEKQAKVISLPSQTCIYKHSITETSFILRADVVQMSQGVCVA
CFCANGHIMTLSVPGLRPLMDVNYLPLTDMRIARTFCFTNLGQAMYLCSPTEVQRITYSQ
DTCENLQEMLGELFTPVETPEAPNRGFFKGLFGGGAQSLDREELFGEVTAGRASRSLAQH
IPGPGGIEGMKGAASGVVGDLARARIALDERGQKLGELEERTAAMMASADSFSKHAHEMM
LKCKDKKWYQF
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaacatcaggaaggtgctggacggtttgaaagaggtgtcctcctccgca
ccgtctgtccaagtggggccacaggagaaccatctgatccaggagaccctccagtccgag
catttccagctctgcaagactgtccgtcatggcttcccctatcagccgtcgtccatggct
tttgaccccgtgcagaagatactggccatcgggacccagagcggagcgctgcgattgttt
ggtcgtcccggagtggagtgttactgtcagcatgagagtggagcagccgtcatccagcta
cagttcctcatcaatgagggagcgctggttagtgctttggctgatgacagtgtccacctg
tggaacctgaggcagaagagaccagccatcctccactccctcaagttcaacagagagaga
ataactttctgccacctgcccttccagagtaaatggttgtacattggcacagaacgagga
aacatccacattgtcaacgtggagtcctttatgctctcaggctacgtcatcatgtggaac
aaagccattgaactgtcctccaaggctcacccaggaccagtcgtccacataagtgataac
cccatggacgagggaaagcttataattggatttgagtctgggatcgtggtcctgtgggat
ctgaaatcaaagaaggcagactatcgctacacttatgatgaggctatccactcagttgcc
tggcatcacgagggcaagcagttcatttgcagtcactcagatggaactctgaccatatgg
aacatcagaggccagggcaagcccatgcagacaatcacaccgcacggaaaacagcccaag
gatgggaagaagccagagccttgtaaacccattcttaaagtggagtacaaaacaaccaga
aatggggaacccttcataatcttgtccggtggtctgtcctatgacacggtgggccggcgg
ccatgtctgacagtaatgcatgggaagagtactgctgtgctggagatggattatcctata
gtagacttcctcacactatgtgagacaccatatcctaatgattttcaggaaccttacgct
gtggtggtccttctagaaaaggatttagtggtgatcgaccttgcacaaaatggttacccc
atattcgagaacccctatcctctgactatccatgagtctcctgtgacctgctgcgagtac
tttgccgactgccctgtggacctcatacctgcactttactctgttggctcgcggcagaag
cgacagggctacagcaaaaaggaatggcccattagtggtggaaactggggtcaaggcaca
caaagctaccccgagatcatcatcacagggcatgctgatgggactgtaaagttctgggat
gcctctgcaataatgctccaggtgctctataagctcaaaacagccaagatatttgacaga
aaccggtctaaagaggacaagggcagcactgaggcgtcggatgacgacccctttgccatt
cagataatggcctggtgccctgagagccggatgctctgtgtggccggtgtgtcagccaac
gttatcatctaccgcttcagcaagctggaagtaactactgaggtggtacagctactagag
gtgcgaatgcagtacgagctgaacgacatagagtctccagatggcgggggcgaacagacg
tcggcgctccccacccctggcgcctcccctcagacgagcggcccaccttcacacccttcc
accagcagcaacaactctgacggaggcaacatgccctgcctcaaagtgcgcagtgctcca
ttgaagcagtctccaggttaccaggtagatttggtggtccagttagtgtgggtgagcgga
gagcctcctcagccgatcacaagtctggcgcttaattcctcctatggcctattggtgttt
ggcaacagtagcggtctggcggtggtggactacgtccagaagacggtcgtgctcaacttg
ggtacggtcgagctttacggctccaacgacccctatcagagacagccccggtcgccaaga
aagacacgacagccgtctggaggtctgtgcgacatcaacgagggctcggccacatgtgag
gaccgctgcaagtcccctacttcagaccaccgggacaattctttcagccgctcacgctcc
tccagcgtcaccagcatcgacaaggaagcccgggaggccatcagctctttccacttctgc
gagaccttcgcccggaagggggacagcactttgactccctgcctgtatgtgggaacctcc
ctgggaactgtgctggttctagctcttacattgccacctgctggggaacagcgacaactg
cagccagttctcatttcaccgacaggcatgttggctcggctgaagggaagcatcttgcgg
atggctttcctggactccacaggttcccagctgcctcctgcgtacgagccttggtatgaa
cccaacgtctcagcagatggcgaagaacgagagaaggtccgtaagcgccggcccgtctcc
gtgtccccgtccagctcccaggacctcagcgagagccaatacgccgtggtgtgttcagag
aaacaggccaaagtcatctccctcccctcccagacttgcatctacaaacacagtatcaca
gagacctccttcatcttacgggcagatgtggtgcagatgagccaaggcgtgtgcgtggct
tgtttttgcgccaacggccacatcatgaccctcagtgtgccgggactgaggccgctcatg
gatgtaaactacctacctttgacagacatgcggatagccaggacgttctgtttcactaac
ctgggtcaggccatgtacctctgttcccccactgaggtccagaggatcacttacagtcag
gacacttgtgaaaacctacaggagatgctgggtgagctatttacaccagtggagacaccg
gaggcacctaacagagggttcttcaaaggtctctttggaggaggagcacagtcactggat
agagaggagctatttggtgaggtaacagctggaagagcttcacggagtctggcccagcac
atccctggcccgggtggcatagagggcatgaagggggctgcatccggcgtggtgggagat
ctggcacgtgcccggatagcactggatgaaagaggccaaaagctgggcgaactggaggag
agaacagctgccatgatggccagcgccgattcgttttccaaacacgcccacgagatgatg
ctgaagtgcaaagacaaaaagtggtaccagttctga
DBGET
integrated database retrieval system
