Amphiprion ocellaris (clown anemonefish): 111569960
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Entry
111569960 CDS
T06018
Symbol
sox21b
Name
(RefSeq) transcription factor Sox-21-B
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111569960 (sox21b)
Transcription factors [BR:
aoce03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
111569960 (sox21b)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
111569960
NCBI-ProteinID:
XP_023128201
Ensembl:
ENSAOCG00000030244
UniProt:
A0AAQ6A0T7
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Position
11:complement(7835166..7837931)
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AA seq
248 aa
AA seq
DB search
MSKPMDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLMKKDKFSFPVPYNLGEHDALKVNGLSAGALSESV
IGNPDKAAAAAAAAAARVFFNPSMSTNPYSFFDLGSKMTELSPPSFPYASPLGYPPGGAA
AFTGTGSVGGGTHTHTHSHPSPGNPGYMIPCNCTAWPSAGLQPPLAYILLPGMGKPQLEP
YPAYAAAL
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagccaatggatcacgttaaacgtccgatgaatgctttcatggtctggtccaga
gcccagcgcagaaaaatggctcaggagaatccgaaaatgcacaactccgagatcagcaag
aggctgggagcggaatggaaacttctcaccgagtctgagaaaaggccattcatcgacgaa
gccaagcgactgcgagcgatgcacatgaaggaacacccagactataaatacagaccgagg
cggaagcccaagactctgatgaagaaagataagttttctttcccggtgccctacaatctc
ggggagcacgacgcactcaaagttaacgggctttccgctggagcactttccgagtctgtc
attgggaaccctgataaggcggcggcggccgcagcggccgcagcggcgagggttttcttc
aacccgtccatgtccacgaacccctattcatttttcgacctgggatccaagatgactgag
ctttctccgccttcgtttccgtacgcgtctcctttgggctacccgccgggaggcgctgcg
gctttcaccgggactggcagtgtaggtggcgggacgcacacccacactcactctcatccg
tccccgggaaacccaggctacatgatcccgtgtaactgtacggcctggccctcagcagga
ctccagccgcccttagcatacatcctgctccccgggatgggaaaacctcaacttgaaccg
taccctgcatatgctgcggcgttatga
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