KEGG   Amphiprion ocellaris (clown anemonefish): 111570032
Entry
111570032         CDS       T06018                                 
Symbol
vps41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X2
  KO
K20184  vacuolar protein sorting-associated protein 41
Organism
aoce  Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04140  Autophagy - animal
aoce04148  Efferocytosis
aoce05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:aoce00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    111570032 (vps41)
   04148 Efferocytosis
    111570032 (vps41)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    111570032 (vps41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aoce04131]
    111570032 (vps41)
Membrane trafficking [BR:aoce04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    111570032 (vps41)
SSDB
Motif
Pfam: TPR_Vps41 Beta-prop_Vps41 zf-RING_Vps41 Clathrin WD40_CDC20-Fz Beta-prop_RIG_2nd zf_RING_Vps8_fungal WD40_WDHD1_1st Beta-prop_HPS5 WD40_Prp19 Beta-prop_EML_2 TPR_7 Vps39_1 TPR_19 zf_RING_Vps8 TPR_PEP5_VPS11 TPR_17 TPR_GEMI5 Beta-prop_IFT140_2nd zf-Vps39_C zf-RING_5 zf-rbx1 Helicase_PWI
Other DBs
NCBI-GeneID: 111570032
NCBI-ProteinID: XP_023128318
Ensembl: ENSAOCG00000000842
LinkDB
Position
22:complement(19350483..19372326)
AA seq 909 aa
MTAAAFDINNSFFCNVLVDIFGTENTSRGYLTCIFFTHVEILQLLSSDIPLTNIIMAEVE
EEGRKPSEEFTDESEEEDSEEEPKLKYERLSNGVTEILQNDAASCMTVHDKFLALGTHFG
KVFLLDIQGNVTQKFEISSVKINQISLDESGEHVGICSEDGKVQVFGLYTREGFHENFDC
PVKVVALHPQFTRSNYKQFVTGGNKLLLYERNWLNRWKTSVLHEGEGTITNIQWRANLIA
WANNVGVKIYDISTKQRITNVLRDNVSLRPDMYPCSLCWKDNTTLIVGWGTSIKICVVKE
RNPTEMRDLPSRYVEIMSAFETEFFISGLAPLADQLVTLFFVKENSDQMDEEFRARPRLD
IIQPLPESCEEISSDALTVRYFQDNECRDYRLEHAEGESLFYIISPKDIVVAKERDQDDH
IDWLLEKKKYEEALMAAEISFKNIKRHDVQKIGMAYINHLVEKGDYDSAARKCQKVLGKN
MELWENEVYRFKTIGQLKAISQYLPRGDLRLRPAIYEMILHEFLKTDYEGFATLIREWPG
ELYNNMAIVQAVNDHLKRDPTNSTLLTTLAELYTYDQRYDRALEIYLRLRHKDVYQLIHK
HNLFSSIEDKIVLLMDFDKEKAVDMLLDNEDKISTDRVVEELADRPELLHVYLHKLFKRD
HHKGQKYHERQIGLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVFLLSRMGN
CRRALQMIMEELEDVDKAIEFAKEQDDAELWEDLISYSIDKPPFITGLLNNIGTHVDPIL
LIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLQKMHRTQMRGVRV
DEENICESCHATILPSDMAKPFSVVVFHCRHMFHKECLPSSGTIPGVQFCNICSAKRRGP
GSGILEMKK
NT seq 2730 nt   +upstreamnt  +downstreamnt
atgaccgcagcagccttcgacatcaacaattcttttttttgcaacgttttagtggacatt
tttggcacagaaaacacctcgaggggatatttaacatgtattttcttcacacatgttgaa
atattacaactactctcttcggatataccgctaactaatataataatggcggaagtggag
gaggagggaaggaaaccaagtgaggaattcacagatgagtctgaggaggaggacagcgag
gaggagcccaagctgaagtatgagaggctctccaatggggtgacagaaatcctccagaac
gatgcagccagctgtatgaccgtccatgacaagtttcttgccttaggtacccattttgga
aaggtgtttctgctggacatccaaggaaatgtaactcagaagtttgagattagttcagtg
aagatcaaccagatcagtctggatgaaagtggagagcatgtgggcatctgctccgaggat
gggaaggttcaagtgttcggcctctatacgagagagggcttccacgagaactttgactgt
cccgtcaaagtggttgcgttacaccctcagttcaccagatcaaattacaaacagtttgtc
acgggaggaaacaagcttctcctgtatgaaagaaactggctgaatcgctggaagacgtcg
gttctacacgaaggcgagggaacgatcaccaacatccagtggagagccaacctgatcgca
tgggccaacaatgtgggagttaaaatctatgacatcagcaccaagcagcggatcaccaac
gtgttgagggataacgtcagtctgaggcccgacatgtatccatgcagtctgtgctggaag
gacaacaccaccctcatcgtaggctggggtacttccattaagatttgtgtcgtgaaagag
cgaaatcctactgaaatgagggatctgcccagccgctatgtggaaataatgtccgcgttt
gaaactgagtttttcatcagcggtttggctccgctggcagatcagctggtcaccttgttc
tttgtgaaggagaactccgatcaaatggatgaggagtttcgtgcgcggcctcgtctggac
atcatccagcctcttcctgagagctgcgaggagatttcttcggacgcgctgacggtgcgc
tacttccaagacaacgagtgcagggactaccgcctcgagcatgcagagggagagtcgctc
ttctacatcatcagtcccaaagacatcgttgtggccaaagagcgcgaccaggatgaccat
attgattggctgcttgaaaagaagaaatatgaggaggcgctgatggctgcagagatcagc
ttcaaaaacattaagagacacgatgtccagaagattggaatggcttacatcaatcacttg
gtggagaagggagactatgacagtgctgcaaggaagtgccaaaaggttcttgggaaaaac
atggaactgtgggagaatgaagtgtacaggtttaagaccatcggacagctgaaggccatc
agtcagtatttgccaagaggagacctgcgtctgagaccagccatctatgaaatgatcctg
catgagtttctgaaaacagactatgagggttttgccactctgatccgggaatggcctggg
gagctttataacaacatggccattgtccaggctgtcaatgatcacctgaagagggatcct
accaacagcacgctgctcaccacactggctgagctatacacatacgaccagcgctacgac
agagctttagaaatctacctgagactgaggcacaaagatgtttaccagctgatccacaag
cacaaccttttctcctccatagaggacaagatcgtcctcctcatggactttgacaaagag
aaagctgttgacatgctcctcgacaacgaagacaagatatcgacagacagagtggtggaa
gaactagcagacaggcctgagcttctgcatgtgtacctccataaactgttcaagagggac
caccacaaaggccagaagtaccacgagaggcagatcggcctgtacgctgagtacgaccga
ccgaatctcctccctttcctcagagacagcacgcactgccctcttgagaaggctcttgag
atctgtcagcagaggaactttgtagaggagactgtgttcctgctcagcaggatggggaac
tgcagacgagccctgcagatgatcatggaggagctggaggacgtggacaaggccatagaa
tttgctaaagagcaggacgatgcagagctgtgggaggatctcatctcttattctatcgac
aaaccacctttcatcacggggctcctcaataacatcggtactcatgttgatcccattctg
ctcatccatcgcataaaggaaggcatggagatcccaaacctcagagattcactcgtgaaa
atcctccaggattacaacctacagattcttttgagggaaggatgcaagaagatcctggtg
gccgactccttgtccctcctccagaagatgcatcgaactcagatgagaggagtccgagtc
gatgaggagaacatttgcgagtcgtgtcacgctacaatattaccctcagatatggctaaa
cccttcagtgtggtggtgtttcactgcagacacatgtttcacaaggaatgtttgccatct
tcaggaacaattcctggggtgcagttttgtaacatctgcagcgcgaagagacgaggacct
ggaagtggaatccttgagatgaaaaagtga

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