Amphiprion ocellaris (clown anemonefish): 111570088
Help
Entry
111570088 CDS
T06018
Symbol
acanb
Name
(RefSeq) aggrecan core protein
KO
K06792
aggrecan 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
aoce00535
]
111570088 (acanb)
00536 Glycosaminoglycan binding proteins [BR:
aoce00536
]
111570088 (acanb)
04091 Lectins [BR:
aoce04091
]
111570088 (acanb)
Proteoglycans [BR:
aoce00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
111570088 (acanb)
Glycosaminoglycan binding proteins [BR:
aoce00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
111570088 (acanb)
Lectins [BR:
aoce04091
]
C-Type lectins
Lecticans
111570088 (acanb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
EGF
Motif
Other DBs
NCBI-GeneID:
111570088
NCBI-ProteinID:
XP_023128404
Ensembl:
ENSAOCG00000011821
UniProt:
A0AAQ5XNL7
LinkDB
All DBs
Position
3:complement(22026642..22044843)
Genome browser
AA seq
1327 aa
AA seq
DB search
MTPLLLLCLSLLPFISATISFEDQDDVDGTLRVSIPVEMPLRPLLGSKVVVPCYFQDNTV
NDPGAPTIAPLSHRIKWTYVTKEKVSTILVASEGKVQVETEYLDRVTMVNYPLVPTDATM
EMTELRSKDSGTYRCEVMHGIEDNYDSVDIQVQGIVFHYRAISTRYTLTFEKAKAACIQN
SATIATPAQLQAAYDDGYHQCDAGWLSDQTVRYPIHEPRDRCYGDKETFPGVRTYGVRDV
NETYDVYCFAEKMSGRVFYSMSVEKFTFYEAGDQCAKLGARLATTGELYLAWKGGMDVCN
AGWLGDRSVRYPINIARPQCGGGLLGVRTVYLFPNQTGYPYPDSRYDAICFQAGEDGGVV
PERTTPFPDIINMTPAPGLFPSSTTSAGHKESRSGGVDTFSPRPIPPSVTDTVTPVIREP
GLGLTDIYAAMAPTGVVFHYRPITGRYTLTFLEAQQACQNIGAVIASPPQLQAAFEKGLH
QCDAGWLRDQTVRYPIVSPRDNCAGNLPHLPGVRSYGLRPATERYDVFCYVERLRGEVFF
TSDYDSFSYEEAVQHCQKLNTTLAAPGQLYAAWNQGLDKCRPGWLMDRSVRYPITTPRSH
CGGGQVGVHIIYAFPNQTGFPDEHSRYDAYCFKAEFPVVHAENETSVDLTIVAVDVINKT
TVTVDHFAPTVETTVDYNETETHVIITETEFINKTTVTTQQVAPAVRPVLPPPPVDVSGS
GSADHSASGEISGESGTSSTSGEASGSGQGVIFSGHTDVFSGDQSGSGYPQEAEGGSSVI
FTSGDAGSASGSGSVEGYDRQHSGSGISGSGFASGSGDISGESMIIMVDGKMVEVSKTHQ
TSTEQELGQGGIDTSGGFLESSVSGSGGMSGSGFSGFSGVSFVDHSAIDLTVQPSGEQEV
SGYHPFGSGFRGGFPSSFPSGVSGSGSASGDSYQHRGDVIYITDDEMIEMTVSPLERQPE
QGRGVVEVSGEGSGSAIHHEFSGSFHLSGSGVPHERPTAEGLSIALPPSSTMTHTEYIAS
LGQSGLGEIGQEEATPAVVTPDAAYTSPTTAPSVSFATPAVVEQPEVVEASVDLCDPNPC
GSGTCSVQGDIAVCQCPTGFTGDDCSTPLQGCAEGWLEFMGNCYLHFAERDTWSEAEQRC
QELNAHLVSISSQEEQQFVNSNGQDYQWIGLNDKDVQNEFRWTDGSPLTFENWRPNQPDN
YFNSGEDCVVMIWHEGGQWNDVPCNYHLPFTCKTGPVMCGAPPEVEHGRPMGSSRQRYPV
NSIVRYQCDAGYTQRHLPVIRCLTNGQWEEPQVECTEAGANSNRLHKRSLRRRSRGVSSR
QEQRKLH
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgacccccctgcttctgctgtgtttgtctttgctgcccttcatctcggcaacaatatca
tttgaagaccaagatgacgtggatggcacattgcgtgtcagcatccctgtggagatgcct
ctgcgtcctctgctaggaagcaaagtcgtggtgccatgttactttcaggacaacaccgtc
aacgaccccggagccccaaccattgccccgctctcacaccgcatcaaatggacctacgtc
acaaaggagaaagtcagcacaatcctggtggcatcagagggaaaggttcaagtggagaca
gagtatttggacagagtgacaatggtcaactacccgctggtgcccactgatgccaccatg
gaaatgacagaactgaggtccaaagattctggcacctaccggtgcgaagtgatgcatggc
atcgaggacaactatgactctgtggatatccaggttcagggaattgtgttccactaccgg
gccatctccacccgttacactctgacatttgagaaggccaaggcagcctgtatccagaac
agtgccaccattgctactccagcccagctccaggctgcctatgatgatggatatcaccag
tgtgatgctggatggctttctgatcagactgtcagataccccatccatgagccacgggac
cgttgctatggtgacaaggaaaccttccccggtgtgagaacttatggcgtgagagacgtc
aacgagacctacgatgtgtattgttttgcagagaagatgtcaggcagagtcttctactcc
atgtctgtagagaagtttaccttctatgaagcaggagatcagtgcgccaaactgggtgcc
agactcgccactactggagagctttaccttgcctggaaaggaggcatggatgtgtgtaat
gctgggtggctgggcgacaggagcgtacgttatcccatcaacatcgccaggcctcagtgt
ggaggggggctcctgggagtgagaaccgtctacctgttccccaaccagacaggatacccc
tacccagactctcgctatgatgccatctgctttcaggctggtgaggatggaggtgtggtg
cctgagaggaccacccccttccccgacatcatcaacatgacaccagcccctggactcttt
ccaagcagcaccacttcggctgggcataaggagagtaggtctggaggagtggacactttc
tccccacgacccatcccacccagtgtgacagacacagtgacccctgtgatccgtgagcct
ggactgggtctcacagatatatatgctgccatggctcccaccggtgtggtgttccactac
cgacccatcaccggtcgatacactctgacctttttagaggctcagcaggcttgccagaat
attggggcggtcattgccagccctccacagctgcaggcagcctttgagaaagggctacac
caatgtgatgctggctggctgcgcgaccaaaccgtccggtatccaattgtgtcacccaga
gataactgtgctggtaatctgccacaccttccaggagtccgatcctacggccttagaccg
gccactgagcgctatgacgtattctgttatgtggaacgtctcagaggtgaggtcttcttc
accagcgactatgacagtttctcctacgaggaggctgtgcagcactgtcagaaactcaac
accaccctggctgcccctgggcagctgtatgctgcctggaatcaaggacttgacaagtgt
cgtccaggctggctgatggaccgcagtgtccgttaccccatcacaacccccaggtctcac
tgtggtggtggccaggtgggagtccacatcatctatgcattccccaaccagacaggcttc
ccggatgagcattcacgctatgacgcctactgttttaaagctgaatttcctgttgttcat
gctgaaaatgaaaccagtgtagacctgacaatagtggctgtggatgttatcaacaagaca
acagtcacagttgatcactttgctcccactgttgagactactgtagactacaacgaaact
gaaacccacgtaattattactgaaactgagtttatcaacaagacaaccgtcacaactcaa
caagttgctcctgctgtgagaccagttttacctccacctccagttgatgtgtccggctct
gggtcagctgatcattcagccagtggagagatctctggggagtctggaacgtccagcacc
agtggtgaagcatctgggtcagggcagggcgtcatcttcagcggacacactgatgtcttc
tctggagaccagtcaggctctggatatccacaggaggccgaaggaggaagttctgtcatc
ttcacatctggagatgcgggtagtgcatctggatctggatctgttgaagggtatgacaga
caacattctggctctggtatatcaggatcaggttttgccagtggaagtggagacatcagt
ggagaatcaatgatcatcatggttgatggaaagatggtggaggtgtcaaaaacccaccaa
acatccactgaacaggagcttggccagggcggcattgataccagtgggggcttcttggaa
tcaagtgtgtctggatcaggaggtatgtctgggtcaggcttcagtgggttttctggcgtt
tcatttgtcgaccacagtgccattgacctaacagtccagccatctggggagcaagaggtg
tccggatatcacccctttggatcagggttccgtggtggtttcccaagtagttttccatct
ggtgtttcaggcagtggctctgcctctggagactcttaccagcatcgtggtgatgtcatc
tacataacagatgatgagatgatagagatgactgtatcaccactggaacgccagcctgag
cagggtcggggtgtggtagaggtaagcggggagggaagtgggtcagcgatccaccatgaa
ttcagcggcagcttccatctctcaggaagtggagttcctcatgaaagaccaactgctgag
ggactctctatcgccctgccgcctagttctacgatgactcacacagagtacattgcctct
cttggccaatctggacttggggagattggtcaggaagaggccactccagcagtagtgact
ccagacgcagcctacaccagcccaaccacagcaccatctgtgtcattcgcaactcctgct
gttgtggagcagcctgaagtagtggaagcttctgtagacctctgtgatccaaacccttgt
ggttcaggaacctgctctgtgcagggagacatcgctgtgtgtcagtgtcctactggtttc
actggtgatgactgttcaacacctttgcagggctgtgctgagggctggttggagttcatg
ggcaactgttacctccattttgcggaaagagacacctggtctgaggcagagcaacgctgt
caggagctcaacgcccacctggtcagcatcagctcccaggaggagcagcagtttgtcaac
tccaatggtcaggactaccagtggattggacttaatgacaaagatgtacagaatgagttc
cgctggacagatggcagtcctctgacttttgagaactggaggcctaaccagccagacaac
tacttcaactctggggaggattgtgttgtgatgatctggcacgagggcggacagtggaat
gatgtgccttgcaactaccaccttcccttcacctgcaagactggacctgtgatgtgtgga
gctcccccagaggtggaacacggccgaccgatgggcagcagcagacagcgctaccccgtc
aactccatagtccgctaccagtgtgatgcaggctacacacagcgccacctgcctgtcata
cgctgtctgacaaatggacagtgggaagagccacaagtggaatgtacagaagccggcgcc
aacagtaaccggctacacaaaaggtccctcaggagaagaagtagaggggtcagcagccga
caggaacagaggaaactccactga
DBGET
integrated database retrieval system
