Amphiprion ocellaris (clown anemonefish): 111570109
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Entry
111570109 CDS
T06018
Symbol
cul4b
Name
(RefSeq) cullin-4B
KO
K10609
cullin 4
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03420
Nucleotide excision repair
aoce04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111570109 (cul4b)
09124 Replication and repair
03420 Nucleotide excision repair
111570109 (cul4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aoce04121
]
111570109 (cul4b)
03400 DNA repair and recombination proteins [BR:
aoce03400
]
111570109 (cul4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aoce04147
]
111570109 (cul4b)
Ubiquitin system [BR:
aoce04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
111570109 (cul4b)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
111570109 (cul4b)
TCR (transcription coupled repair) factors
Cul4-CSA complex
111570109 (cul4b)
Exosome [BR:
aoce04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111570109 (cul4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
DUF5555
Motif
Other DBs
NCBI-GeneID:
111570109
NCBI-ProteinID:
XP_023128433
Ensembl:
ENSAOCG00000011022
LinkDB
All DBs
Position
13:complement(13643382..13655229)
Genome browser
AA seq
864 aa
AA seq
DB search
MFPTGLSSPNPPPPPTQEARPAATDVKNDSGNITSPKKRKINGSEREDPSDTISSSPPKT
LNSSSSSSSCSPTPLHIQKKLRFEDSVDFIGLDVKMAEEAAAAAASCSNNKSKAMFLTGG
VGHHANGLTKTAGSGTFSNSKPGAAKKLVIKNFREKPKLPENYTQETWQKLKEAVEAIQN
STSIKYNLEELYQAVENLCSHKISAKLYKQLRAVCEDHIKAQIDQFREDALDSVLFLKKI
DKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQSKTIDG
ILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQERE
VPEYLHHVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTATLQKGLTHLLDENR
IQDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHI
IDVCFMKNEKFVNAMKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELEKMLDK
IMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMF
KDMELSKDIMVQFKQYMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPPEMVRLQEIFK
TFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFTLEEIKL
ATGIEDSELRRTLQSLACGKARVLTKTPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQMK
ETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLMSEVYNQLKFPVKPADLKKR
IESLIDRDYMERDKENSNQYNYVA
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaacaggtttatcttcccctaatcccccaccaccgccaacccaggaggctaga
cccgcggctactgatgtcaaaaacgacagcggtaacatcacatctcccaagaagaggaaa
ataaacggctccgagagggaagaccccagtgacacgatctcctcttcgcctcccaagacc
ctgaattcctcctcttcctcctcctcctgctctcccactccgctgcacatccagaagaag
ttgaggttcgaggattcagtggatttcattggactggatgtgaaaatggctgaggaggct
gctgccgccgccgcttcgtgctccaataacaaaagcaaagccatgttcctgaccggcggc
gtggggcaccatgcaaacggactgaccaaaaccgcaggatccggcaccttctccaacagt
aaacccggagcagccaagaaactagtcatcaagaacttcagagaaaagcctaagttgccc
gagaactacacacaggagacctggcagaagctgaaggaggcggtggaggccatacagaac
agcacttcaatcaagtacaatctagaggagctctaccaggctgttgaaaacctctgctcc
cataagatatctgccaagctttacaaacagctgagggccgtgtgtgaagaccacatcaag
gcacaaattgatcaattcagagaggatgccctggacagtgtgcttttcctgaagaaaatt
gacaagtgctggcaagatcactgcagacaaatgattatgattaggagtatatttttgttt
ttggatcgcacctatgttttacaaaattcaatgctgccatcaatctgggacatgggtctg
gagctgtttaggttctacatcatcagtgatctgaaggtccagagtaaaaccatcgacggg
atcctgctgctcattgagagggagcgaaacggcgaggcgatagaccgcagtctgctgagg
agcctgctgagcatgctctctgacctgcagatttatcaagactcctttgagcagcgcttt
ttggaggaaactaatcgactgtatgctgcagagggacagaggctgatgcaggagagagag
gtaccagaatatctgcatcatgtcaacaaacgcttagaggaagaggccgacagagtaatc
acatatcttgaccagagcacacaaaaacccctcattgccacagtggagaagcagttgctg
ggtgaacatctcactgcaactctgcaaaaagggctgactcacctgctggatgagaacaga
attcaggatctgtctcttctctatcagctcttcagtcgagtgcgagggggtgttcaggtg
ctcctgcagcactggatagagtacataaaggctttcggaagcacaattgtaatcaatcca
gaaaaagacaaaacaatggtgcaagagttgctggacttcaaagataaggtggatcacatc
atcgacgtgtgcttcatgaagaatgagaaatttgttaatgccatgaaggaggcattcgaa
acattcataaacaaacggccaaacaaacccgcagagctcatagcaaaacatgtggattca
aagctaagggcaggaaacaaagaggcgacagatgaagaactggagaagatgttggataag
atcatgattatctttagatttatctatggaaaagatgtttttgaggcattttacaagaag
gatctggccaagaggttgctggttggaaaaagcgcttcagtagatgctgaaaaatcaatg
ttgtcaaagctgaaacacgaatgtggagcagcattcaccagcaaactagaggggatgttc
aaggacatggagctttctaaagacatcatggtgcagttcaaacagtatatgcagtgccaa
aacattcccggcaacatcgagctgacggtgaacatcctcactatgggctactggcccacc
tatgtcccgatggaagtgcatctgcctcctgagatggtgcgactgcaagagatcttcaag
accttctacctgggcaaacacagtggcaggaagctgcagtggcaatcaacactagggcat
tgtgttttaaaagctgaatttaaagagggtaagaaggagctacaggtgtcgcttttccaa
acacttgtattgctgatgtttaatgaaggagaggagtttaccctggaggagatcaaactg
gcaacaggaatagaggacagtgaactgaggcggacgctgcagtcacttgcgtgtggaaaa
gcacgggtcctcaccaaaaccccaaaaagcaaagatgtggaggacggagacaagttttcc
tgcaatgacgacttcaaacacaagctcttcaggatcaaaataaaccagatccagatgaaa
gaaacggtggaggaacaagccagcaccactgaaagggtctttcaggatcgtcagtaccag
atcgatgctgcaattgtgcggatcatgaagatgaggaagactctgagccataatctcttg
atgtctgaggtgtacaaccagctcaagttccctgtcaagcctgctgacttgaagaagagg
atagagtctcttattgacagggactatatggagcgtgacaaggagaactccaaccagtac
aactatgtggcctag
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integrated database retrieval system
