Amphiprion ocellaris (clown anemonefish): 111570126
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Entry
111570126 CDS
T06018
Symbol
hnf1ba
Name
(RefSeq) hepatocyte nuclear factor 1-beta-A isoform X2
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111570126 (hnf1ba)
Transcription factors [BR:
aoce03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
111570126 (hnf1ba)
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
LolA
APP1_cat
HTH_5
Motif
Other DBs
NCBI-GeneID:
111570126
NCBI-ProteinID:
XP_023128456
Ensembl:
ENSAOCG00000010621
UniProt:
A0A3Q1AZ33
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Position
7:complement(682157..700256)
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AA seq
573 aa
AA seq
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MFSKMVSKLTSLQQELLSALLDSGVTKDVLIQALDDMDPSPPGFGVKLESLPLSPAPPQS
GKMNGADVDSKPVFHTLTNGHSKGKLSGDEGSEDGDDYDTPPILKELQSLNTEEAAEQRA
EVERMLAEDPWRAARMIKGYMQQHNIPQREVVDITGLNQSHLSQHLNKGTPMKTQKRAAL
YTWYVRKQREILRQFNQAAHGPASIMTDKGNQDPAFFFPEFNTSGQGMGQPGDEVGSEPS
CKKMRRNRFKWGPASQQILYQAYDRQKNPSKEEREALVEECNRAECLQRGVSPSKAQGLG
SNLVTEVRVYNWFANRRKEEAFRQKLAMDAITAPTHGINPLLSHSSPHHPQTSTSPPMRY
SQGPSEVTSSSTISHHSSNAMATSQSVLQQVSPGGLDHSHSLLSPDTKMISGSGGGLPPV
STLTNIHSSHHSHQQTQNLIMPLSGVMAIAQSLNTSQSQTVPVINSVAGSLAALQPVQFS
QQLHSPHQQSLMQQSPSHMSQQPFMATVTHSHMYSHKQEPPQYSHPSRFPSAMVVTDANS
ISTLSSMSSSKTDAPVNKMVQLGGLSWCPLQAW
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgttctctaaaatggtatcgaagctgacatccctgcagcaggagctgctcagcgccctg
ctggactcaggagtcaccaaagacgtgctgatccaggccctggatgatatggaccccagt
ccgcctggctttggagtaaaactggagagtctgccgctgtctcccgctccgcctcagagc
ggcaagatgaacggggcggacgtggactccaagcccgttttccacacgctcactaacggc
cacagcaagggcaagctgtccggggacgagggctccgaggacggggacgactacgacacg
ccgccgatcctgaaggagctccagtcgctaaacacggaggaggccgcggagcaacgagcg
gaggtggaacgcatgttggccgaggatccgtggcgtgctgcccgcatgatcaaaggttac
atgcagcagcacaacatcccccaacgggaggtggtggacatcacggggctgaaccagtct
cacctctcccagcacctcaacaaaggcacgcccatgaaaacgcagaagcgagcggccctc
tacacctggtatgtcaggaaacagcgggaaattctccgacagttcaaccaggcagcacac
ggtcctgccagcattatgacagataaaggcaatcaggatccggcctttttcttcccagag
ttcaacacgtctggtcagggcatgggtcagccgggcgacgaggtgggcagcgaaccgtcc
tgcaagaaaatgagacgcaaccgcttcaaatgggggccggcgtcccagcagatcctgtac
caggcctacgacaggcagaagaaccccagcaaggaggagagggaggctttggtggaggag
tgcaacagggccgagtgtctgcagagaggcgtctccccctccaaagctcagggcctcggc
tccaatctggtcaccgaggtgcgagtttacaactggttcgccaaccgccgcaaagaggaa
gccttcaggcagaagctggccatggacgccatcacggcgccgacccacggcatcaacccg
ctgctgtctcacagctcgccgcatcacccccagaccagcacctcgcctcccatgcgttac
agccaaggccccagcgaggtcacttcctcctccaccatcagccaccacagcagcaacgcg
atggcgaccagccagtcggtgctgcaacaggtgtctccaggtggattggaccacagccac
agtctgctgtcacccgacaccaagatgatttcaggttcaggcggaggacttcctccagtt
agcacgctgacaaacatccacagttcccatcacagccaccagcagacacagaacctcatc
atgcctctttccggagtcatggccatcgcacagagtttaaacacatcacagtctcagacg
gtgccggtgatcaacagcgtggctggcagcctcgcagcgctgcagccggtgcagttttcc
cagcagctccacagtcctcaccagcagagcctgatgcagcagtcgccgagccacatgagc
cagcagccgttcatggcgacggtcacacactcgcacatgtattctcacaagcaagagcct
ccacaatattcccacccgtcacgtttcccctcagccatggtggtcacggatgccaacagc
atcagcacactcagctccatgtcctccagcaagacagacgctcctgtaaacaagatggtg
caacttgggggtctctcctggtgtcctcttcaagcttggtga
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