Amphiprion ocellaris (clown anemonefish): 111570127
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Entry
111570127 CDS
T06018
Symbol
srsf1a
Name
(RefSeq) serine/arginine-rich splicing factor 1A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03040
Spliceosome
aoce05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111570127 (srsf1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111570127 (srsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoce03041
]
111570127 (srsf1a)
Spliceosome [BR:
aoce03041
]
Common components
Common spliceosomal components
SR proteins
111570127 (srsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
111570127
NCBI-ProteinID:
XP_023128458
Ensembl:
ENSAOCG00000010671
UniProt:
A0A3Q1CF50
LinkDB
All DBs
Position
7:complement(734382..738830)
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AA seq
245 aa
AA seq
DB search
MSGVVRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFE
DPRDADDAVYGRDGYDYDGYRLRVEFPRSGRGSRGGFGGIGGAPRGRYGPPSRRSEYRVV
VSGLPQSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHE
GETAYIRVKLDGPRSPSYGRSRSRSRGSRSRSRSRSASRSRSNSRGRGRGSPRYSPRHSR
SRSRS
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtgtcgtgcgaggccctgctgggaacaacgactgccgaatttacgttggaaat
ctgcccccggacatccgcaccaaagatgtggaggacgtgttctacaaatacgggaccatt
cgagacatcgacctgaagaaccggagaggagggccgcctttcgcctttattgaattcgag
gacccgcgggacgccgacgatgcagtctatgggcgtgatggttacgactacgacggctac
agactgcgtgtggagtttccacggagcggcaggggctccagaggcggcttcggtgggatc
ggcggggcaccgagaggcagatacgggccaccgtctagacgatccgagtacagggtcgtt
gtgtcggggctccctcagagcggcagctggcaggacttgaaggaccacatgcgtgaggca
ggcgacgtgtgctacgccgacgtttacagagatggaaccggagttgtagagtttgtgcgc
aaagaggacatgacctatgccgttcgaaagctggacaacaccaaattccgctcccatgag
ggagagactgcttacattcgtgtgaaattagatggtccccgcagcccaagttacggaaga
tctcgctcacgcagccgtggcagccggagtaggagccgcagtcgcagcgccagccgcagt
cgcagcaattcccgtggtcgcggcagaggatcgcctcgctactcgcctcgtcacagccgt
tctcgctcccgttcctaa
DBGET
integrated database retrieval system
