Amphiprion ocellaris (clown anemonefish): 111570150
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Entry
111570150 CDS
T06018
Name
(RefSeq) transcription factor Sox-10-like
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111570150
Transcription factors [BR:
aoce03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
111570150
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sox_N
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
111570150
NCBI-ProteinID:
XP_023128520
Ensembl:
ENSAOCG00000034015
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Position
4:complement(13595901..13601139)
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AA seq
500 aa
AA seq
DB search
MSGEEHSLSEAELSPGGSDDGHSLSPTQPGAAPGQHSPLTGPPQQLTALCVGDGSGDDEG
RARAKSEEEDDRFPIGIREAVSQVLDGYDWTLVPMPVRVNNGNKAKPHVKRPMNAFMVWA
QAARRKLADQYPHLHNAELSKTLGKLWRLLNENDKRPFIEEAERLRKQHKKDYPEYKYQP
RRRKNGKLTTTSESDSQGEGEASHSQSHYKTLHLEHNGGAGSPLGDLHHHHHHHHHPAGQ
GHSPPTPPTTPKTELQSGKLSDAKREGGAGAAGGSGGSRGALGVGAEGASGGPSSSSAKP
HIDFGTMDIGEISHEVMSNIEPFDVNEFDQYLPPNGHPQSGTGAPAAGSSASSYAYALAA
ASGHSAWLSKQQQQPQASPSSSDPSKAQIKSESASGSHYAEASSSPSSGTHVTYTPLSLP
HYGSAFPSLASRAQFEYGEHQAPGAYYAHSSQAPGLYSAFSYMGPTQRPLYTTIGDPSSV
APSHSPTHWEQPVYTTLTRP
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcgaggagcacagcctgtccgaggcggagctgagtcccggagggtcagacgat
ggccactcactgtcaccgactcaacccggagcggcacccggacagcactcacctctgacc
gggccgccgcagcagctgaccgcgctctgtgtgggtgatggcagcggggatgatgaaggc
agagccagagccaaatcagaggaagaggacgaccgcttcccgatcggcatcagggaagcg
gtcagccaggtgctggacggatatgactggacacttgtgcccatgccggtgcgcgtaaac
aacggaaacaaagctaagccccatgtcaaaaggcccatgaacgccttcatggtgtgggcg
caagcggcgaggaggaagctggcggaccagtacccccatctgcacaacgcggagcttagc
aagactctcggcaaactgtggaggctgctgaacgagaacgacaagaggccattcatcgag
gaggcagagaggctgaggaaacagcacaagaaggactacccggagtacaagtaccagccc
cggagacgcaaaaacggcaaactaacgactacgagtgagtccgatagccagggggaaggg
gaggccagccactcccagtcacactacaagaccctgcatctggagcacaatggtggggct
gggtccccactgggcgatctgcaccaccaccaccatcatcaccaccatcctgctggtcag
ggtcacagcccacccacgccccccaccaccccaaagacagagctccagtccggtaaactg
tcagatgccaagagggaggggggagcaggagcggctggaggatcgggagggtcaaggggg
gccctcggggtgggagctgagggagcatccggtggtccctcatcatcaagtgctaaaccc
cacatcgacttcggcaccatggacatcggcgagatcagccacgaggtgatgtccaacatt
gagccatttgacgtgaatgagtttgaccagtaccttccacccaacggccaccctcagagc
ggaactggggcccctgcagctggatcctcagcctcgtcctatgcctatgccctggctgcg
gctagcgggcactccgcctggctctccaaacagcagcagcagcctcaggcctctccgtct
tcctccgacccctccaaggctcagatcaagagtgagtctgcgtccggaagccactacgcc
gaggcctcatcctctccctcctcaggcacccatgtcacctacaccccactcagcctccct
cactatggctctgctttcccctcgctggcctccagggctcagtttgagtacggagagcac
caggcccctggggcgtactatgcccactccagccaggcccctgggctgtactcagccttc
tcctacatgggccctacacagaggcctctgtacacgaccataggagacccctccagcgtt
gccccctctcacagccccacacactgggagcagcctgtttacaccacactcacaagacct
tga
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