Amphiprion ocellaris (clown anemonefish): 111570154
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Entry
111570154 CDS
T06018
Name
(RefSeq) transcription activator BRG1 isoform X2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111570154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoce03021
]
111570154
03036 Chromosome and associated proteins [BR:
aoce03036
]
111570154
Transcription machinery [BR:
aoce03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111570154
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
111570154
Chromatin remodeling factors
BAF complex
111570154
PBAF complex
111570154
GBAF(ncBAF) complex
111570154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
111570154
NCBI-ProteinID:
XP_023128527
Ensembl:
ENSAOCG00000009450
LinkDB
All DBs
Position
4:complement(13441737..13462139)
Genome browser
AA seq
1680 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGTMLGPSPGPSPGSSHSMMGPSPGPPSSAHSQPGPS
GYGPDNMHPLHKPMEGLHEKGLSEESRFSQMKGLSMRQGGHSGMGPPPSPLDQHSQGYHS
PLGGSDHSSPVPSNGPPSGPLMPSSSSSSSSGGPGSASTPLDGPSGDQHTLGPNNRPGPP
GSAGPGPSPGPSLGSNVPSLGSGLETSGPTGPTGPGGPGGPGGPTPFNQNQLHQLRAQIM
AYKMLARGQPLPDHLQMAVQGKRPMPGMQQQQPMPSLAPGAGGGPGGGPAGPGPGPGPGP
MASGYSRAHGMMGPNMPPPGPSGTPAGMQGQNPNGPPKSWPEGPMVNAAAPSNAPQKLIP
PQPTGRPSPAPPSVPPAASPVMPPQTQSPGQPAQPTPMMPYHAKQNRITPIQKPCGLDPV
EILQEREYRLQARITHRIAELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCM
RRDTALETALDAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAK
DFKEYHRSITGKLQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQ
KKDKRLAYLLQQTDEYVANLTELVRAHKAAQALKEKKKKKKKKKKLENAEGQTPAMGPDG
EPLDETSQMSDLPVKVIHVDSGNILTGVDAPKAGQLETWLEMNPGYEVAPRSDSEDSEEE
EEEEEEEEEPQPSAAPVEEKKKITDPDSEDVSEVDVRHIIENAKQDVDDEYSGAAFARGL
QSYYSVAHAVTEKVEKQSSLLINGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQ
TIALITYLMEHKRLNGPYLIIVPLSTLSNWVYEFDKWAPTVVKVSYKGSPAARRAFVPQL
RSGKFNVLLTTYEYIIKDKQVLAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVL
LTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRL
HKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSSLQRVLYRHMQAKGVLLTDGSEKDKKG
KGGTKTLMNTIMQLRKICNHPYMFQQIEESFSEHLGFSGGIVQGPDLYRASGKFEVLDRI
LPKLRATNHKVLLFCQMTSLMTIMEDYFAYRSFKYLRLDGTTKAEDRGMLLKTFNDPESE
YFIFLLSTRAGGLGLNLQSADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVN
SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEVWGQEVCLRM
NEEDEVPDDETVNQMIARSEEEFDQFMRMDLDRRREEARNPRRKPRLMEEDELPTWIMKD
DAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLKAIEEGTLEEMEEEVRHKKTT
RKRKRDRDLDLPGPSSSSGGRGRGDKDDDGKRQRKRGRPPAEKLSPNPPVLTKKMKKIVD
AVIKYKDSASGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRGHRYRSLGDLER
DVMLLFQNAQTFNLEGSLIYEDSIVLQSVFTSLRQKIEKEEESEGEESEEEEEEQEEGSE
SESRSVKVKIRLGRKDKGGDRGKARSRRTGRTRAKPVVSDDDSEDEQEEERSPSATDEES
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgccagatccccccatgggaggcacccctcgcccaggtccctcccctggtccg
ggtccttcccctggcaccatgctgggccccagccctgggccttctccaggctcctctcac
agcatgatgggccccagccctggtcctccgtcctctgcacactcccagccagggccctct
ggatatggcccggacaacatgcaccctctgcacaaacccatggagggtttgcacgagaag
ggcttgagtgaagagagccgcttcagtcagatgaagggattgtctatgagacagggcggg
cacagtgggatgggccccccacccagtcctctggatcaacactcacaaggataccactct
cctttaggtggctctgaccactccagccccgtcccttcaaatggtcctccctccggacct
ctaatgccatcatcctcttcttcctcctcctccggtggccctggctctgcttctacacct
ttagatggccccagtggagatcagcacacgttgggtcctaataaccggcctggtcctcca
ggcagcgctggaccaggacccagccctggacccagtcttggctctaatgtccccagcctt
ggttctggtcttgaaaccagtggccctaccggccctacgggtcctggtggcccgggtggt
cctggtggtccgactccctttaaccagaatcagcttcaccaactcagagcccagatcatg
gcttataagatgctggccaggggacaacccctgccagaccacctccaaatggccgtccaa
ggaaagagaccaatgccagggatgcagcagcagcagcctatgcccagcctggctcctgga
gctggaggagggccaggaggtggtccagcaggaccaggaccaggaccagggcctggacca
atggcatcaggctacagccgggctcatggaatgatgggtcccaacatgcctcctccaggc
ccatcagggaccccagctgggatgcaggggcagaaccccaatggacctccaaagtcctgg
cctgagggccccatggtgaatgcagctgccccctcaaacgcaccccaaaaactgatcccc
cctcagcccactggccggccctctcctgctcctccttcagttcccccagctgcctcccct
gtaatgcccccacagacccagtccccaggccagccggctcagcctactcccatgatgcct
taccacgccaagcagaaccgcattacccccattcagaaaccctgtggcctcgacccggtg
gagatactgcaggagagggagtacaggttacaggctcgtataacccatcgcattgctgaa
ctggagaacctgccgggttctctggctggagatttacgtaccaaagctactatagagctc
aaagccctccgactacttaatttccagagacagctgcgtcaagaggtggtggtgtgtatg
cgccgggacacagctctagagacggctcttgatgccaaggcctacaagcgaagcaagcga
cagtctctccgagaggcccgcatcacagagaaactggaaaaacagcagaagatcgagcaa
gagcgcaaacgtagacaaaaacatcaggagtacctcaacagcatcctccagcatgccaaa
gacttcaaggaataccaccgttcaatcacaggcaaacttcaaaaactcaccaaagccgtg
gccacctaccacgccaacactgaacgggagcagaagaaggagaatgaacgtattgagaaa
gagagaatgaggaggcttatggctgaggatgaggagggctaccgtaaactgattgaccag
aagaaggataagcgcctggcctacttgctgcagcaaactgatgagtacgttgccaacctc
acagagctggtcagagcacacaaagctgcacaggccctcaaggagaagaaaaagaagaag
aagaaaaagaagaagttggagaatgcggagggtcagactcctgccatggggcctgatgga
gagcctctggatgagacgagccagatgagtgacctgcctgtgaaggtcatccatgtggac
agtgggaacatcctgacaggggtggacgctcccaaagcgggccagctggagacctggctg
gagatgaaccctggttatgaggtggctccccgctcggacagtgaagacagtgaggaggag
gaagaggaggaggaggaagaagaggagcctcagccttctgcagcaccagtagaggaaaag
aagaagattacagaccctgacagcgaggatgtgtcagaggtggacgtccgacacatcatt
gagaatgcgaagcaggacgtggatgacgagtatagtggggcagcatttgctcgaggactc
cagtcgtattactctgtggctcacgctgtcacagagaaggtggagaaacagtcgagtctc
ttgataaatggacagctcaaacagtatcagattaaaggtctggagtggctggtttctctt
tacaacaacaacctaaacgggatcctggctgatgaaatgggtctgggcaaaaccatccag
accatcgccctcatcacatacctcatggagcacaaacggctcaatggaccctacctcatc
atagtacccctctcaactctttctaactgggtgtatgagtttgacaagtgggcaccaaca
gttgtgaaagtgtcctacaaggggtctcctgctgctagaagagcatttgtaccccaactg
cgtagtggcaagtttaacgttttactcaccacttatgagtacatcatcaaagacaaacaa
gtgctggccaagatccgttggaaatatatgattgtggatgaaggccaccgtatgaagaac
caccactgtaaactgacccaggtcctcaacacccattaccttgctccacggcgagtcctg
ctgacagggactccactgcagaacaaactacctgagctgtgggcgctgctcaatttcctt
ttgcccaccatcttcaagagctgcagcaccttcgagcagtggtttaacgccccttttgct
atgactggagagaaggtggatctcaatgaagaggagacaatcttgattattcgtcgtctc
cacaaagtgctgcgtcccttcctgttgagaagattaaagaaggaagtcgaggcacagctt
ccagagaaggtggaatatgtgatcaagtgtgatatgtcgtctctccagagggtgctgtac
cggcacatgcaggccaagggtgtcctgctcactgatggatcagagaaagacaagaagggc
aaaggaggaacaaagacactgatgaacaccatcatgcagctgaggaagatctgtaaccat
ccttatatgttccagcaaatagaggaatcattctctgaacatttaggattctctggtggg
atcgtccagggtcctgacctgtatcgggcatcaggaaagtttgaggtgttggatcgaatc
ctgccaaagttgagagccacaaaccacaaagtgctgctcttctgtcagatgacgtcactg
atgaccatcatggaggactactttgcttaccgtagcttcaagtatcttcgtcttgatggc
actacgaaagctgaagacagaggaatgttgctgaagacattcaatgacccagagtcagag
tactttatctttctcctgagcacaagagccggaggccttggcctcaacctgcagtctgcc
gacactgtggttatttttgactctgactggaacccacatcaggacctgcaggctcaggac
agagcccatcgcattggtcagcagaacgaggtgcgagtgttgcgtctctgtacagtcaac
agcgtagaggagaaaatcctggcagcagctaaatacaaactgaatgtggaccaaaaggtc
attcaggctggcatgtttgatcagaagtcttccagccatgagcgcagggctttcctgcag
gccatcctggaacacgaggagcaagacgaggtctggggtcaagaagtgtgtctacgcatg
aatgaggaggatgaggtgccagatgatgagacggtgaaccagatgattgccaggagtgaa
gaagagtttgaccagtttatgcgtatggacctggatcggcgtcgtgaggaggctcgcaac
ccgcggcgaaaacctcgtctgatggaggaggacgagctgcccacttggatcatgaaggac
gacgctgaggttgagcgactgacctgtgaagaggaggaggagaaaatgtttggacgaggt
tctcggcagcgaaaggaggtggactacagcgattcgctgaccgagaagcagtggctcaag
gcaatagaggagggcaccctggaggagatggaggaagaggtgcgtcacaaaaagacgacc
cgcaagaggaagagggaccgcgacctggatctccctggtccctcctcttcctcagggggt
cgtggacgaggggacaaagacgatgatgggaaaaggcagaggaagaggggacgaccgcct
gctgagaaactctccccaaatcctcctgtcctcacgaagaagatgaaaaagattgtggac
gctgtcatcaagtacaaagacagcgccagtgggcgtcagctaagcgaggtgttcatccag
ctgccatctcgaaaagagctgccagagtactacgagctgatccgcaagccggtggacttc
aggaagatcaaggagaggatccgaggccatcgctaccgcagtctgggtgacctggagaga
gacgtcatgctgctcttccaaaacgctcagaccttcaacctggagggttcactgatatac
gaagactccatcgtgctccagtcagtgttcaccagcttgaggcagaagattgagaaggag
gaggaaagtgagggagaagagagcgaggaagaggaggaggagcaggaggaaggatcagag
tctgaatctcgctcagtgaaagtgaaaatccgcctaggcaggaaggataaaggtggcgat
cgagggaaggcacgcagccgacgaacaggacgcaccagagccaaacctgtcgtcagtgat
gatgactctgaggatgagcaggaagaggagcgctccccgagtgccactgatgaggagtcc
tga
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integrated database retrieval system
