Amphiprion ocellaris (clown anemonefish): 111570180
Help
Entry
111570180 CDS
T06018
Symbol
cftr
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce02010
ABC transporters
aoce04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111570180 (cftr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
111570180 (cftr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aoce02000
]
111570180 (cftr)
Enzymes [BR:
aoce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
111570180 (cftr)
Transporters [BR:
aoce02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
111570180 (cftr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFTR_R
ABC_membrane
ABC_tran
AAA_21
RsgA_GTPase
SMC_N
AAA_29
DUF87
AAA_16
AAA_22
nSTAND3
MMR_HSR1
T2SSE
AAA_23
FtsK_SpoIIIE
NB-ARC
Dynamin_N
MeaB
Zeta_toxin
nSTAND1
Motif
Other DBs
NCBI-GeneID:
111570180
NCBI-ProteinID:
XP_054865286
Ensembl:
ENSAOCG00000008153
LinkDB
All DBs
Position
3:24747059..24797361
Genome browser
AA seq
1512 aa
AA seq
DB search
MQKSPVEDANFLSKFFFWWTSPLLRKGFRKKLELTDVYKAPSFDSADTLSERLEREWDRE
VVSAKNKPRLMRALARCFFGPFAFFGVLLYLGEASKTVQPQLLGRIIASFDPFHAPERSQ
GYFLALGLSLLFTARFLLLQPAIFGLHHLGMQIRIALFSLIYKKTLKLSSRVLDKISTGQ
LVSLMSAHLNKLDESLGLAHFVWITPLQCILCGGLLWELIDVNGFCTLAALTLLGLVQAW
LSQKMGPHRVKRAGMISRRLALTSEIVENIHSVKAYGWEEVMETIIKNIRQEEVTLTRKI
GSLRYFYSASYFFSAILVIVAAIVPHALSRGIILRRIFTTASYCMVLRMTITRQLPGSIQ
MWYDTLALVKKIEEFLTKEEHRVLEYNLTTTELELVNVSASWDEGIGELFEKIKQENKAN
RHLNGDAGLFFTNLYVTPVLRNISLYLEKGKMLAVAGSTGSGKSSLLMMILGELVPSEGK
IRHSGRISFSPQTSWIMPGTIRDNILFGLTYDEYRYTSIIKACQLEEDFALLPEKDKTLL
IEGGVTLSGGQRARLGLARAVYKDADLYLLDAPFTHLDIVTEKEIFEKCVCKLMASKTRI
VVTSKLEHLKRADKILLLHNGDCYFYGTFSELQAQRPDFSSLLLGLEAYDNINAERRSSI
LTETLRRVSVDETAGFRGPESIRQSFRQVPPPIISPQSQTHPVSDGYPEKRKQSLILNPL
AAARKFSFIGNSQQTANTPQSTTIEDGVHELSERKFSVVPEDDQVEEVLPRSNLYHHGLQ
HLNGQRRQSVLAFITNAQGHERREQMQSSFRRKLSITPQYDLASELDIYARRLSKDSVYD
ISEEVDEEDMEQCFADERENVFETTSWSTYLRYVTTNRSLVYVLIFILFVFAIEVAGSVI
GIFLITDKIWRDGENPASPNYIDEQHPNASSPPVHLAVIVTPTSAYYIIYIFVATSESVL
ALGFFRGLPLVHTLLTVSKRLHEQMLSAVLRAPMAVLNTMKTGRIMNRFTKDMATIDDML
PLVLFDLIQLTLIVMGAIFTVSIMRPYIFIAAIPLAVIFVVLRKYFLRTGQQLKLLEAEA
RSPIFSHLIISLKGLWTIRAFGRQTYFEMLFHKALNTHTATWFHYLATLRWFLFRCDMIF
VLFFTAAAFIAVGTNQDKPGEIGIIVALAMLILGTFQWAVITSITVDGLMRSVDRVFKFI
DLPSEEPLPGKSGGKGGSDLIIDNPHAHDCWPNRGQMDVQGLTVKYTEAGRAVLSDISFS
VDGGQSVGLLGRTGSGKSTLLSALLRLASTDGEISIDGVSWSSVSLHTWRRAFGVVPQRV
FILTGTFRMNLDPHGRYSDEDLWRVAEEVGLKSVIEQFPDKLDFQLEDSGSVLSNGHKQL
LCLARSILSKARILLLDEPSAYLDPITLQVLRKTLKQAFSGCTVILSEHRVEPLLECQSF
LMIEGSSMKSYDSIQKLMNETSHLKQAMSPADRLRLFPTLHRLNSSKRAPQQTAKISSLP
EEAEDDVHDTRL
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagtcaccagtggaagatgcgaatttcctctccaaatttttcttctggtggaca
tcaccgctgttaaggaagggcttcagaaagaagttggagctgacagatgtgtacaaggct
ccttcgtttgattcagcagacactctctccgagagactcgaaagagaatgggacagggag
gtggtgtcagccaagaacaagcccaggctgatgagagcactggctcgctgcttctttggc
cctttcgccttctttggtgtcctcctataccttggggaggcctccaagacggtgcaacct
cagcttctgggtcgcatcattgcttcctttgacccgttccatgctccagagcggagccag
ggatacttcttggccctgggcctcagcctcctcttcaccgcccgcttcctgctgttgcag
cctgccatctttggcttgcatcatctgggcatgcaaatccgcattgcccttttcagtcta
atatacaagaagaccctgaagctgtccagccgagtcttggataagatcagcacaggtcag
ctggttagtctgatgtctgcccacctcaacaagctggatgagagtctgggtctggcccac
tttgtatggatcacccctctgcagtgtatactgtgtggaggtctgctctgggagctgatc
gatgtgaacggattctgcaccctggcagctctcaccctgctgggcctcgtccaggcctgg
ctctcccagaagatgggacctcacagggtcaagcgagcagggatgatcagccgccgcctg
gccctcacctcagaaattgtagagaacattcactctgtaaaggcttacggctgggaggaa
gtgatggagaccatcatcaaaaacatcagacaagaggaggtgacactgaccaggaagatc
ggctctctgcggtacttctacagtgcctcgtacttcttctctgccatcttggtcattgtg
gcagctatcgtgccacatgcactaagtagaggcatcattctccgtcgaattttcacaaca
gcctcctactgcatggtgctacgaatgacaatcacccgccaactcccgggttccatccag
atgtggtacgacacgctggcactggtcaagaagattgaggagttcttgacgaaggaagaa
cacagagtgctcgagtacaatctgaccaccactgaactggagttggtcaacgtgtctgca
tcctgggatgagggtattggtgagctgtttgagaagatcaagcaggagaacaaggcaaat
agacatttgaacggtgacgccggactcttcttcaccaatctgtatgtcacacctgtcctc
agaaatatcagcctttacctagagaaaggcaaaatgctcgcagtggctggatctactggc
tcaggaaagagttccctgcttatgatgatcttgggagagttggtgccatcagaaggtaaa
atcagacatagtggtcgcatttccttctcaccacagacttcttggatcatgccaggaaca
attcgtgacaacatcctgtttggcctgacatatgatgagtaccgctacacctccattatc
aaggcttgccagctggaagaggactttgcgttgctgcctgaaaaagacaagactctcctc
attgaaggaggggtgaccctcagcggcggtcaaagagcacgcctcggcctagccagggct
gtgtataaagatgctgacctctacctgctggatgcacctttcacccacctggacatagtg
acagagaaagagatctttgagaaatgtgtctgtaaactcatggcttccaagactcgtatt
gtggtcaccagcaagttggagcatctcaaacgagcagacaaaatccttctgctgcacaat
ggagactgttacttttatggcaccttctcagaactgcaggcccaacgcccagatttcagt
tccctgctgctcggcctggaagcttatgacaacatcaacgctgagcggcgcagctccatt
ctcacagaaactcttcgcagggtctcagttgatgaaaccgctggtttccgaggcccggag
tcaattcgtcagtcgttccgccaggtaccgcctccaataatcagtcctcagtctcaaacc
catcctgtgagtgatggctaccccgagaaacgcaaacagtcactcatccttaatcctttg
gcagccgcccgcaagttctcctttattggcaactctcaacagacggcaaatacaccccag
tccacgacaatagaagacggtgttcatgaactttcagagagaaaattctctgttgtacct
gaggatgatcaagttgaggaagtgctcccgaggagtaacctgtaccatcatgggttgcag
catctcaatgggcagcggcgccagtctgtcctggcgttcatcaccaatgctcagggacac
gagcgcagagagcagatgcagtcatccttcaggagaaagctatctatcacaccacagtac
gacctggcgtctgagctggacatttacgctcgccgcttgtccaaggacagtgtttatgac
attagtgaggaagtggatgaagaagacatggagcaatgctttgcagatgaacgtgagaac
gtctttgaaactacctcatggagcacttaccttcgctatgttaccaccaataggagctta
gtctacgttctaattttcatcctctttgtcttcgccattgaggttgctggttcagtcatc
ggtattttcctcattactgacaagatctggagggacggcgaaaaccctgcatcacccaac
tacattgatgagcagcatcccaatgcctcgtctccccctgtacacctggcagttattgtc
actccaaccagtgcttattacatcatctacatcttcgtagccacatcagagagcgttctg
gccttgggattcttcaggggtcttcctttagtacacacattactcactgtgtccaaaaga
ctgcatgaacagatgcttagtgctgtgctacgagcccccatggctgtgctcaacactatg
aaaacaggccggatcatgaacaggttcaccaaggacatggccaccatagatgacatgctg
cctctggtgctgtttgacctcatacagctaacattaatcgtcatgggtgccatcttcact
gtatccatcatgcgaccgtacattttcatcgctgccatcccattagctgtaatctttgtt
gtactcaggaagtacttcctacgaactggacagcaactcaaactgctagaggctgaagct
cgcagccccatcttctcccatctcatcatctcactgaagggattatggacaatccgggca
tttgggcgtcagacctactttgagatgctcttccacaaagccttgaacactcacacagcc
acctggttccactacctggctacgctgcgctggtttctcttccgctgtgacatgatcttc
gttctgttcttcaccgccgctgccttcatagctgtgggaaccaaccaggacaaaccagga
gagattggcatcattgtggctctggccatgctcatccttgggactttccaatgggctgtc
atcaccagcatcactgtagacggactgatgcgttcggtggatcgggtattcaaattcatc
gacctgccatcagaggagccactgccaggaaaatctggtggtaaaggaggctcagacctc
atcatcgacaaccctcacgcccacgactgctggcccaaccgcggtcagatggacgtccag
ggcctcaccgtcaaatacacagaggctggacgtgctgtcctcagcgacatctccttctct
gtggacggtggccagagcgtgggtctgctgggtcgaacaggttcagggaagagcaccctg
ctgtccgctctgctgcgtctcgcctccactgatggagaaatctctattgacggtgtttcc
tggagctccgtctccctgcacacatggaggagggcctttggagtggtgccacagagagtc
ttcatcctgactggaaccttccggatgaacctggacccacatggacgctacagtgatgag
gacctgtggagggtggcagaagaggttggtcttaagtcagtgatagagcagtttccagac
aagttggacttccagctggaggacagcggcagcgtgttgagcaacggacacaaacagctg
ctgtgtctcgcccgctccatcctcagcaaggcccgcatcctgctgctggacgaaccctcc
gcctacctcgaccccataacactgcaggtcctgaggaagacattgaaacaggcgttttct
ggctgcaccgtcatcctatcagaacacagggtggagccactgctggagtgtcagtcattc
ctgatgattgagggcagctcaatgaaaagctacgactccattcagaagctcatgaatgag
acgagtcacctgaaacaggccatgagtcccgccgacaggctccgcctcttcccaacgctg
caccgcctcaactccagcaagagggcgccgcagcagaccgccaagatctcttcactgcca
gaggaagccgaggacgacgtccacgacactcgactctaa
DBGET
integrated database retrieval system
