Amphiprion ocellaris (clown anemonefish): 111570318
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Entry
111570318 CDS
T06018
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce00260
Glycine, serine and threonine metabolism
aoce00630
Glyoxylate and dicarboxylate metabolism
aoce00670
One carbon pool by folate
aoce01100
Metabolic pathways
aoce01200
Carbon metabolism
aoce01230
Biosynthesis of amino acids
aoce01240
Biosynthesis of cofactors
aoce04981
Folate transport and metabolism
Module
aoce_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
111570318 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
111570318 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
111570318 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
111570318 (shmt1)
Enzymes [BR:
aoce01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
111570318 (shmt1)
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
111570318
NCBI-ProteinID:
XP_023128779
Ensembl:
ENSAOCG00000019565
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Position
19:7841884..7849283
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AA seq
482 aa
AA seq
DB search
MSFTNGHCVSKESWDSHNKMMLEPLAINDSEVFSIIKKEKHRQMYGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEHVDELERLCQKRALEAYGLDSDKWGVNVQPYSGS
PANFAVYTAVVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVNPETGYI
DYDRLQENARLFHPKLIIAGTSCYSRNLDYARLKLIANENGAYLMGDMAHISGLVAAGVV
PSPFDHCDIVTTTTHKTLRGCRAGLIFFRRGVRSVDAKGKEIMYNLESLINQAVFPGLQG
GPHNHAIAGVAVALKQAMTPEFKAYQLQVLANCKVLSSSLIDHGYKIVTGGSDNHLILLD
LRSKGTDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRFGSPALTSRGLMQDDFRKVA
ELIHKAIELTLEVQRSMDPKATLKEFIQTLAQGEKFQQRVAELRAEVEAFAGQFPMPGLP
EL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttacaaatggccactgtgtgagtaaagaatcatgggactcgcacaacaagatg
atgctggaaccgctggccatcaacgattcagaggtgttctccattataaaaaaagagaag
cacaggcagatgtacggtctggagctgatagcatcagagaacttcgccagcagagcggtt
cttgaggctctgggttcctgtatgaacaacaagtattctgagggctatccaggccagagg
tactacggtggtacagagcatgttgatgagctggagagactctgtcagaagcgggcactg
gaggcctatggtctggactcagacaaatggggtgtcaatgtgcagccgtactcaggctcg
cctgctaactttgctgtctacacggccgttgtggagccccatgggaggatcatgggattg
gacctgcctgatggaggtcacctgacacatggcttcatgactgagaagaagaaaatctca
gcaacttccatcttttttgagtccatgccatataaggtgaatccagaaactggctacatt
gattatgacagactacaagaaaatgcacgtctgttccaccccaaactcatcattgcagga
acaagctgctattcccgcaaccttgactacgcccgcttgaagctgattgctaatgagaat
ggtgcgtatctgatgggagacatggctcacatcagtggattagtggctgctggagtggtg
ccctcaccctttgaccactgtgacattgttaccacgacgacgcacaagacgctgcgtggc
tgccgagctggacttatcttcttcaggagaggtgtgcggagtgtagacgccaaaggcaag
gagatcatgtacaacttggagtctttgatcaaccaagctgtgtttccagggctgcaggga
ggaccacacaaccatgctattgcaggtgttgctgtggctctcaaacaagcgatgacacca
gaatttaaggcctaccagctgcaggttctcgctaactgcaaagttctatccagttctctt
attgaccatggatacaagattgtaaccggtggctctgacaaccatctcatcctgctggac
ctgcgcagcaaaggaaccgatggaggccgagctgagaaggtcctggaagcctgtgccatt
gcttgtaacaagaacacctgtccaggagataagagtgctttgcgccctagtggtctgagg
tttggctctccagctctgacctccagaggtctgatgcaggatgacttcaggaaggtggct
gagttgatccacaaagctattgaactgaccctggaggtgcagagaagcatggatcccaaa
gccactctgaaggagttcattcagacactggctcagggagagaagttccagcagcgggtt
gctgaactcagggctgaggtggaggctttcgctggtcagttccccatgccgggccttcct
gagctgtag
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