Amphiprion ocellaris (clown anemonefish): 111570324
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Entry
111570324 CDS
T06018
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03440
Homologous recombination
aoce03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111570324 (top3a)
03460 Fanconi anemia pathway
111570324 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aoce03032
]
111570324 (top3a)
03400 DNA repair and recombination proteins [BR:
aoce03400
]
111570324 (top3a)
Enzymes [BR:
aoce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
111570324 (top3a)
DNA replication proteins [BR:
aoce03032
]
Eukaryotic type
DNA Topoisomerases
111570324 (top3a)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
111570324 (top3a)
FA (Fanconi anemia) pathway
111570324 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
111570324
NCBI-ProteinID:
XP_023128793
Ensembl:
ENSAOCG00000019482
LinkDB
All DBs
Position
19:complement(7791700..7813129)
Genome browser
AA seq
1028 aa
AA seq
DB search
MLVLHLLGRSLLRSGLQRPGVQRRCFCAAQSGRCPDTPQETEMIRSRAQIKKVLCVAEKN
DAAKGISEIMSGGRATRREGMSKFNKIYEYEYHLFGQNVTVSMTSVSGHLLGLEFKAPFQ
KWHSCNPVLLFDAEVEKYCPNNMIQIKQTLEKEVRQCQALVVWTDCDREGENIGFEIIDV
CKAVKPNLQVFRAKFSEITPNSIRRACETLMEPDANISDAVDVRQELDLRIGASFTRFQT
LRLQKIFPESLANQLISYGSCQFPTLGFVVERFKAIQAFIPETFYKIKVLHEVEEDTVEF
SWKRNRLFSHTACLVLYQICMEDPIATVTSVTSKPKSKWRPLPLDTVELEKLASRKLKIS
AKETMKIAEKLYTQGFISYPRTETNIFPANLSLGPLVEQQTQSPAWGTFAQRVLDQPGGP
NPRQGKNSDQAHPPIHPTKYTGTLQGNEGRVYEFIVRHFLACVSQDALGQETVVDIDIAQ
EKFSASGLMIIARNYLDVYPYDKWNTKLIPVYEQESQFQPSAIEMVDGQTSPPQLLTEAD
LISLMEKHGIGTDATHAEHIETIKSRMYVGLTADQRFLPGELGMGLVEGYNSMGYEMSKP
NLRAELEADLKLVSEGRKDKQNVLQHHIQKYKTVFIESVRKAKKLDEALSPYLGAAQEIT
EEQEQDMEILLPVRKCPNCGRDMVLKKKREGNSKYLSCVGYPACKTAVWFPDMVLEVSRD
DSVCPTCRPHPIHMLKFKFRRGTLPPMMPLEFVGCIGGCDEMLREVLDLKYHRAGGGGGG
GAVGRGGGGEGRGGDPRPPPPRPPRQEPPRAPSSNPHPVHSWTPQPRPPTGGSGMSADPN
GDMIVCNCGQEALLLTVRKDGPNQGRQFYKCNAGSCNFFLWADQPAQQGAPQSRGLPSQP
RRPSLGIRNTSRGGRGQEVGALAGQVMCNCNDIAVTRTVQKDGPNKGRMFHTCGKPREQQ
CGFFQWADENVPPPGGFGGGFSGDGGGERRGRKITGHGIANKPPAAKKPRTCGICHVQGH
TRVTCPQR
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgctagtactgcacctgctcgggagatctttgcttcgatcgggattacagcggccaggg
gtccagcggaggtgtttctgtgcggcacagagcggcaggtgtccggacacaccgcaggag
acagaaatgatccggagccgggctcagatcaagaaggtcctctgtgtggcggagaagaac
gatgcagctaaaggcatctccgagatcatgtccggcggcagggctacgaggagggaagga
atgtcaaagtttaataaaatctatgagtatgaatatcatctcttcggtcagaatgtgacg
gtttccatgacatcagtatcaggtcatttgctgggcctggagttcaaagcaccgttccag
aaatggcacagctgcaatcctgtgctgctgtttgatgcagaggtggagaagtattgtccc
aacaacatgatccaaatcaagcaaacgctagagaaggaggtgaggcagtgccaggccttg
gtcgtgtggacggattgtgacagggagggagaaaacatcgggtttgaaattatagacgtt
tgcaaagcagtgaagccaaatttacaggtctttcgggccaaattctctgagatcacaccc
aactcaattcggagagcttgcgaaactctgatggagccagatgctaacatcagtgatgct
gttgatgtccgccaggagctggacctgcgaataggtgcatcctttacccgattccagacg
cttcgcctgcagaagatctttccagagtccctcgccaatcagttaatctcgtacggcagc
tgtcagtttcccactttgggctttgtagtggagcggttcaaagctatccaggccttcata
ccagagaccttctacaagatcaaagtgctgcatgaggtagaggaggacactgtggagttc
agttggaaaagaaaccgtctcttcagtcacacggcttgtctggttctctatcagatctgc
atggaggatcccatagcaacagtcacctcagtaaccagcaaacccaagagcaaatggagg
ccgctgcctttggacactgtggaactggagaaactggcatctcggaagctaaaaatcagt
gccaaagagaccatgaaaattgcagaaaaactctatacccaagggtttatcagctatccc
cgcacagagaccaacatctttcctgcaaacctgtctctcggccccctggtggagcagcag
acacaaagcccagcatgggggacgttcgcccagcgggtgctggaccagccggggggtccc
aacccacggcagggcaagaactctgaccaagcccaccctcccatacaccccaccaagtac
accggcacgctgcagggcaatgaaggacgcgtgtacgagttcattgtccggcacttctta
gcatgtgtatcccaggatgctttggggcaggagactgtggtggacatagacatcgctcag
gagaagttctccgcctctggactcatgatcattgcaaggaactacctggatgtttacccg
tatgacaagtggaacaccaagttgatcccagtgtatgaacaagaatcccagttccagccc
tctgctattgagatggtggacggacagacgagtcctcctcagctgctcactgaagccgac
ctcatatcgctgatggagaagcatggcattggcacagatgcaacccatgcagagcacatt
gagactataaagagccgcatgtatgtgggcttgacagctgaccagagatttctccctgga
gaacttggcatgggactggtggagggttacaattccatgggctatgagatgtcaaaacca
aacctacgtgctgaactggaggcggaccttaagctggtgtcagagggcaggaaagacaaa
cagaacgtgctgcagcaccacatccagaagtacaagaccgtcttcattgagtctgtcagg
aaggcaaaaaagttagatgaagctctgtcaccgtatctgggtgcagctcaggagatcact
gaggaacaggaacaggacatggagatcctgctgccggtgagaaagtgcccgaactgtggt
cgggacatggtgctgaagaagaagagggaaggaaacagtaaatacttgtcatgtgtgggc
tacccagcctgtaagacggcagtgtggtttcctgacatggtgctggaggtcagcagagac
gacagcgtttgtcccacctgtcggccacatcccatacacatgttgaaatttaagttccgc
aggggcaccctcccacccatgatgccactggaattcgtcggctgcattggtggatgcgat
gagatgctccgagaggtgctcgacctgaaataccacagagcaggtggaggaggtggtggt
ggagcagtgggtagaggtggcggaggggaaggaagaggaggtgaccctcgtccaccccct
ccgaggccccccagacaggaaccgcccagagccccaagttccaatcctcaccctgtccac
tcctggactccacagccaagacctccaacaggcggcagcggcatgagtgcagaccccaac
ggtgatatgattgtgtgtaactgtggtcaggaagctctccttctgacggtgcgcaaagat
ggtcccaaccagggtcggcagttctacaagtgcaacgctggaagctgcaatttttttctg
tgggcggatcaaccggctcagcagggggcaccacagagccgaggacttccctcccagcct
cggaggccatctctggggatcagaaacacatctcggggaggcagagggcaggaagtgggt
gcacttgcaggacaggtgatgtgcaactgcaatgacatagccgtgacacgtacggtgcag
aaggacggtccgaacaagggaagaatgttccacacatgtgggaaaccaagagagcagcag
tgcggcttcttccagtgggctgatgagaatgtacctccaccagggggcttcggtggtgga
tttagcggtgatggaggcggagagaggagggggaggaagataacgggacatggcatcgct
aacaaaccgcccgccgctaagaaacctcgcacctgcggcatctgccacgtgcaaggacac
acccgagtcacctgtcctcagcggtga
DBGET
integrated database retrieval system
