Amphiprion ocellaris (clown anemonefish): 111570435
Help
Entry
111570435 CDS
T06018
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111570435 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoce03021
]
111570435 (taf5)
03036 Chromosome and associated proteins [BR:
aoce03036
]
111570435 (taf5)
Transcription machinery [BR:
aoce03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111570435 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
111570435 (taf5)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
111570435 (taf5)
STAGA complex
111570435 (taf5)
TFTC complex
111570435 (taf5)
SAGA complex
111570435 (taf5)
SLIK complex
111570435 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_Nup120_160
PEP5_VPS11_N
Beta-prop_WDR35_TULP_N
PROPPIN
VPS8_N
CDK5RAP3
LisH_TPL
LisH_PAC1
Urb2
Motif
Other DBs
NCBI-GeneID:
111570435
NCBI-ProteinID:
XP_023128967
Ensembl:
ENSAOCG00000001060
LinkDB
All DBs
Position
4:29151821..29159210
Genome browser
AA seq
751 aa
AA seq
DB search
MAAVQSGMGEGVEEKDIKTEPASDGFGNNNANDGRLVSTSPGSNAPAASNKPVAGGPPED
QQTLLAVLQFLRKNKLTESVEILRREAGLPEDDLDPNGADSSGAGTGGAAGSVDSDAGDA
SSLLTRVTVSSSAAAQAPTKAAAGEDQPDVSVVLSAYSQQGDPALYEVYYSSLKRFIETV
LDCHRAELSQVFYPLFVHMYLELVYNNHENEAKAFFEKFSGDQECYYEDDLRVLSSLTKK
EHMRGNETLLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMPRS
KSQIDAMSGSLAGEAKREANKAKVYYGLLKEPEIELPLDDEDEEAENEEGKPKKKKPKKD
SMGSKSKKQDPNAPSQSRIPLPELKDSDKLDKIMYMKEATKRIRLGPDNLPSICFYSFLN
AYQGLTAVDFTDDSSLIAGGFADSTVRVWSVTPKKLRKVKSAADLNLIDKESDDVLERIM
DEKTASESKILYGHSGPVYGISFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPV
WDTHFSPHGYYFVSGGHDRVARLWATDHYQPLRMFSGHLADITCTRFHPNSNYLATGSSD
RTIRLWDVLNGNCVRIFTGHKGPIHALAFSPNGKFLASGATDGRVLLWDIGHGLMVGELK
GHTDTIYSLRFSRDGEILASGSMDNTVRLWDAMKAFDDLETDDFTAATGHIHLQDNSQEL
LLGTYLTKSTPVIHLHFTRRNLLLAAGAYNP
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtacaaagtggtatgggcgagggggttgaagaaaaagacataaaaacagaa
ccagcgagcgatggcttcggaaataacaacgcaaacgacggcaggctggtctctacgtcc
cccggctctaacgctccggctgcaagcaacaaacctgtggctggaggacccccggaggac
cagcagacactgctggcagtcctgcaattcctcagaaagaacaaactgaccgagtccgta
gaaattttgcgtcgtgaagcgggattaccggaggatgatctggatccgaatggcgctgat
tcctccggggcagggacgggaggtgctgcaggtagtgtggactcagacgccggggatgcg
agctctcttctcacccgggtgaccgtctcatcatccgccgcagcgcaggcgccaaccaaa
gcagcagctggggaggatcagccagacgtcagcgtggtgctgtcagcttacagccagcag
ggagatccagctctgtacgaggtctactacagcagcctgaagaggttcatagagacagtt
ttggactgtcacagagccgagctgtcccaggtcttctacccactgtttgtccacatgtat
ctggaactagtgtacaacaatcatgaaaatgaggcaaaggccttcttcgaaaagttcagc
ggggaccaggagtgctactacgaagacgacctgcgtgttttgtccagcctgacgaagaaa
gagcacatgagaggcaacgagactctgctggacttccgcaccagcaagtttgtcctacgt
atctcccgtgactcttaccagcttctgaaaagacacctgcaggagcgtcagaacaaccag
atctggaatatcattcaagagcacctttacatcgacatctttgacggcatgccacgcagc
aaaagccagatcgacgccatgtctggcagcttggcaggagaggccaagcgagaggccaat
aaggctaaggtttactatggattgttgaaggaaccagaaattgagctgccccttgatgat
gaggatgaggaggcagagaatgaggagggtaaacccaagaagaagaagcccaaaaaggat
agcatgggctcaaagagcaagaagcaagatcctaatgcgccatcacagagcaggataccc
ctgccagaactaaaagactcagacaagctggacaagatcatgtacatgaaggaagccaca
aagaggatccgtttgggccctgacaatctcccttccatctgcttctactcttttctcaat
gcatatcagggtctgactgcagtggacttcactgatgactccagcctgatcgcaggaggc
tttgctgactccacagtccgtgtgtggagcgtcacaccgaaaaagctccgcaaggtcaag
tctgcagcagacttgaatttgattgacaaagagtcagacgatgtgcttgagagaatcatg
gatgagaagacagccagtgagtcaaagatactttatggacacagcggcccggtttacggc
atcagcttcagcccagacagaaactacttgttgtcaagttctgaagatggtacagtcagg
ctgtggagtctccaaacatttacttgtctggtaggatacaaaggccacaactacccagtg
tgggacacgcacttttccccccacggttactattttgtctctggtggacatgacagagtt
gcccgcctctgggcgacggatcactaccagcctctgcggatgttctctggtcacctcgct
gacatcacttgtactcgtttccaccccaactccaattatttggccacaggctcatctgac
cgcaccatccgtctctgggacgtcctcaatggaaactgtgtccgcatcttcactggtcat
aagggtcctatccatgcgctggctttctcacctaatgggaagttcttggcctctggagcc
actgacggcagagttctgctgtgggacattggtcacggactgatggttggagagctcaag
ggccacacagacaccatttattccctcaggttcagcagagatggcgagatactggcctct
ggctccatggacaacactgttcgtctatgggatgcaatgaaagcatttgatgatttagag
actgatgacttcacggcagctacaggacacattcatctacaagataactcccaggagctt
ctgctgggcacctatctgacaaaatctacacccgtcatccaccttcacttcactcggagg
aacctgcttctggccgctggagcctacaatccttaa
DBGET
integrated database retrieval system
