Amphiprion ocellaris (clown anemonefish): 111570492
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Entry
111570492 CDS
T06018
Name
(RefSeq) semaphorin-6D-like isoform X1
KO
K06842
semaphorin 6
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
111570492
NCBI-ProteinID:
XP_054874186
Ensembl:
ENSAOCG00000012783
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Position
15:complement(26989919..27252961)
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AA seq
1177 aa
AA seq
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MASTTRLLPLRLPPPSPSLLLLFTLACCSLSESASTTSFPKDLQPISVVSWEQSYQYPGF
HGLLQDNDTLRLGLDFQRMLRINHMLYIAARDHVFAVNLTTASDDFVPQLKLTWKSKDVS
KCTVRGKNSDECYNYVKVLVPRNDETLFACGTNAFNPTCRNYKMTSLEQVGEEVVGQARC
PFESGQSNVGLFAGGDFYSATMTDFLASDAVIYRSLGDGRPVLRTVKYDSKWLREPHFQH
AIDYGNYVYFFLSEIAVEYTALGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCS
VPGDSFFYFDVLQSLTNVLQINQRPAVVGVFTTQANSIPGSAVCAFYMDDIEKVFNGKFK
EQRTSDSSWTPVPDEQVPRPRPGTCAGDGPASDYKSSVQFPDETLTFIKSYPLMDEAVPS
VNDRPCFTRTSSRSKLTQIVVDVSAGPYKDRTVMFLGSDDGRVLKVLASTHPNDSLGSKL
LEDIDVYNPSKCNVQGQEDRRVLGLELDKDHHALFVAFSSCVIRVPLSRCTQHGVCKKAC
LASRDPYCIWLRTGSCANMAPGFKAGFEQDIEGDHSFHSDSCHADVLATTRNQESAADSA
YGVRRLPELDQRAGANVHYTLLIACVLVAFFLGAILSGFLVSCYCSRSAAHRARRLGKDP
EASLPHALSLRSLAKLNGLLDGQPKEDKLDVSTPKMYSSFIPNGRAEPHLHTPGHQGLPL
GDPDLSLSQSLSQADGELSGLPTPDSTPELPIKNMKALRHHQYEKNQNCNNAKDNNPKSG
PSCSGSSLGFMAVVGNSLTQQVYPFSHHHGNSLSNGSALGAGASSTSLHLPEERKISNDE
RAAAAAAAAGGGGGGVPHHHQSQQSLPQTVVDVSALDELLKHIHEVSASGTGGIKVLTST
SSSSLFPGPSSSASTSGGHHHNHHHHHHHSHHSQTRTHHYNHSHHHSNHHNNNSSSSHHH
QQQIPETESAPYYSTSTLPRDGLPKRLDAPPQNSTSSSAISSSSSSSSSNNPTSSTSIPS
SSSSSSSTPLQQQVIPERPGGGGGGGGGVSVARHHSQRHSLIKMGSGGGAVPRHHSFNQR
GTHAHFLARMNTNSSCNVPPASGAAANANISTNGESQRASIASTCLTRQHSYSGGPHVQR
AAIVRRTASLKPQVPPKPLFLPNTATSPVAEAGKYHY
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgaccacccggctgttgccgttgcgactgccgccaccatcaccatcgctgctg
ctgctcttcacgctcgcttgctgctccttgtccgagtcggcctcgaccacgtccttcccc
aaagacctgcagccgatcagcgtggtcagctgggagcagtcgtatcagtatcctggtttc
catggtttgcttcaggacaacgacacgctgcgtctgggtttggactttcagaggatgtta
cggatcaatcacatgttgtacatcgcagccagggatcacgtgttcgctgtgaatctgacg
acggcttcagacgacttcgtcccgcagctgaagctgacatggaaatccaaagacgtcagc
aagtgtacggtccgagggaagaacagcgacgaatgctacaactatgttaaagtcctggtg
ccccgaaatgacgaaactctgtttgcttgcggcacaaacgctttcaacccaacctgccga
aactacaagatgacgtccttggagcaggtcggtgaggaagtggttggtcaagctcgatgt
cccttcgagtccggtcagtccaacgtcggactgtttgccggtggagatttctactcagct
accatgacggactttctggcgagtgatgccgtcatctacagaagcctgggagacggtcga
cccgtcctcaggaccgtcaaatacgactccaagtggcttcgagagcctcactttcagcat
gccattgactacggtaactacgtctacttcttcctgagtgaaatcgcagtggagtacacc
gccctgggcaaggtggtgttttctcgagttgcccgggtttgtaagaacgacaacggagga
tctccaagagtcctggagagatactggacgtccttcctaaaggctcggttgaactgttcg
gttcctggagattccttcttctacttcgatgttcttcagtctctcaccaacgttctgcag
atcaaccagagacctgcagtggtcggagtcttcaccactcaggccaacagtatccccggc
tcagcagtttgtgccttctacatggatgacatcgagaaagtcttcaacgggaagttcaag
gagcagaggaccagcgactcgtcctggactccggtacccgatgaacaggttccccgaccg
aggcctggtacttgtgcaggtgacggtccggcgtcagactacaagtcgtcggttcagttt
cccgacgagacgctgaccttcatcaagtcgtatcctctgatggacgaagctgttccctcc
gtcaacgaccgaccctgtttcaccagaacatccagcaggtccaaattgacccagattgtg
gtggacgtctcggcgggaccctacaaggaccggactgtgatgttcctgggctcagacgac
ggacgagtcctgaaggttttggcgagcacgcatccaaatgacagcttgggatccaaactg
ctggaggacatcgacgtctataacccatccaagtgtaacgttcagggtcaggaggacagg
agggttctgggtttggagctggataaggaccatcacgccttgttcgtagccttcagcagc
tgcgtgatccgagtgccactcagccgctgcactcaacacggagtctgtaaaaaagcctgc
ctggcctcccgtgacccatactgcatctggcttcgcaccgggagttgtgccaacatggca
ccgggtttcaaggcggggtttgagcaagatatcgagggcgaccactcgtttcactccgac
agctgccacgctgacgtgttggcgacgacaaggaaccaggagtctgcagccgattcggcg
tacggagtccgtcgcctcccggagctggaccagcgagctggtgctaacgtccactacacg
ctgctgatcgcctgcgtgctggtggccttcttcctgggtgccatcttgtcgggtttcctg
gtgtcgtgctactgcagccggagcgccgcccaccgggccaggaggctggggaaggacccc
gaggcatcgctgcctcacgccctgtcgctgaggtcgctggccaagctcaacgggctgctg
gacgggcagccgaaggaggacaaactggacgtttctacaccgaagatgtacagttccttc
atccccaacggccgggctgagcctcacctccacacccccggacaccagggcctgccgctg
ggagaccccgacctcagcctgtcccagtctctctctcaggcagatggagagctctccggc
cttcctacacctgactccaccccggagctccccatcaagaacatgaaggccctgcggcac
catcagtatgagaagaaccagaactgcaacaacgccaaggacaacaacccaaagtcgggg
ccaagctgctctggatccagtctgggtttcatggccgtcgttgggaactctttgacccag
caggtgtatcccttctctcatcaccacggtaatagtttgagcaacggctcagccctcgga
gctggcgcctcctcgacttctcttcacctccccgaggagaggaagatctcaaatgatgag
cgagcagcagcagcagcagcagcagcaggaggaggtggtggaggagtcccacatcaccac
caatcccagcagtccctcccccagacggtggtggatgtgtctgcactagacgagctgctc
aaacacattcacgaggtcagcgcgtcgggaaccggaggcatcaaggttctcacctccaca
tcctcctcctccctgttccctggaccgtcctcctctgcctccacctccggagggcatcac
cataatcatcaccaccaccatcatcacagtcatcacagtcagacccgtacacaccactac
aaccacagccatcaccatagcaaccatcacaacaataacagcagcagcagtcaccatcac
cagcagcagatccctgagacggagtcggctccgtattacagcacctccaccctgccgaga
gatggcctccccaaacgcctggacgcccctcctcaaaactccacttcatcgtctgccatc
tcttcatcttcatcctcctcttcctccaacaaccccacgtcctccacctccatcccttct
tcctcctcttcctcctcgtccactccactccagcagcaggtgattccagaaagacctgga
ggaggaggcggcggcggcggtggtgtatctgtggctcgccaccactctcagcgccactcc
cttattaagatgggcagcggaggcggcgctgtaccccgtcaccacagcttcaaccaacgg
gggacacatgcgcactttctagccaggatgaacaccaacagcagctgcaacgtccccccg
gcctctggtgcggcagctaacgcaaacatcagcaccaacggcgagagccagcgggcgtcg
atcgcaagcacctgcctcacgcggcagcacagttacagcggagggccacacgtgcaacga
gcagccatcgtcaggagaacagcatcgcttaaaccccaagtccctccaaaaccgcttttc
ctgccaaatacagcaacttcgcccgtagcagaggcaggaaagtaccactactga
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