Amphiprion ocellaris (clown anemonefish): 111570499
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Entry
111570499 CDS
T06018
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
KO
K14298
mRNA export factor
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111570499 (rae1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111570499 (rae1)
03036 Chromosome and associated proteins [BR:
aoce03036
]
111570499 (rae1)
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111570499 (rae1)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
111570499 (rae1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_SPT8
NBCH_WD40
Exonuc_X-T_C
Motif
Other DBs
NCBI-GeneID:
111570499
NCBI-ProteinID:
XP_023129067
Ensembl:
ENSAOCG00000012519
LinkDB
All DBs
Position
5:complement(17396861..17403887)
Genome browser
AA seq
369 aa
AA seq
DB search
MSLFGTSSGFGTGGTGVFGSTTTDSHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIGG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDACWSDDGSKVFTASCDKTAKMWDLNSNQA
MQIAQHDGPIKAIHWIKAPNYSCIMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTTTPQDIYAVNAISFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNHNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtttggaacaagctctggttttggtacaggagggaccggtgtgtttggaagc
acgacaacagacagccacaatcccatgaaggatgttgaagtgacttctcctccagatgac
agcatcagctgtctggccttcagtccacccaccatgccaggcaactttctcattggaggg
tcctgggccaacgatgtccgatgttgggaggtgcaggacaatggtcagactgtccccaaa
gcccaacagatgcacacaggtccagtgctggatgcatgctggagtgatgatgggagtaaa
gtcttcactgcttcctgtgacaagacagccaagatgtgggatcttaacagcaaccaagca
atgcagattgcacagcatgatggcccaattaaagcaatccactggataaaagccccaaac
tacagttgtatcatgaccggcagctgggacaaaacactgaagttctgggatacccgttct
cccaatccaatgatgtctctacaaatgccagagagatgctactgtgcagatgttgtgtac
cccatggcggtggttgccacagctgagagaggccttatagtgtaccagttagagaaccag
ccctctgagtttcgcagaatagattctcctctcaaacatcagcatcgctgtgttgccata
ttcaaggacaagcagaacaagcctacaggttttgcactgggaagcattgagggacgagtg
gcaatccactatatcaatcctccaaacccagccaaagacaacttcaccttcaagtgccac
aggtccaatggaaccaacacaaccactccacaggacatctatgctgtgaatgccatttct
ttccatcctgttcatggcacactggccactgtgggctcagatggacgcttcagcttctgg
gacaaagacgcccgcaccaagttgaagacctcggagcagctcgaccagcccatcacagct
tgttgcttcaaccacaatggcaacatctttgcatatgcttctagttatgactggtcaaag
ggccacgagtactacaacccccagaaaaagaattacatctttctgaggaacgctgccgag
gagctgaagcctcggaacaagaaatggtga
DBGET
integrated database retrieval system
