Amphiprion ocellaris (clown anemonefish): 111570502
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Entry
111570502 CDS
T06018
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111570502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoce03021
]
111570502
03036 Chromosome and associated proteins [BR:
aoce03036
]
111570502
Transcription machinery [BR:
aoce03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111570502
Coactivators
SAGA/TFTC/STAGA complex
111570502
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
111570502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
111570502
NCBI-ProteinID:
XP_023129071
LinkDB
All DBs
Position
5:17457566..17470795
Genome browser
AA seq
844 aa
AA seq
DB search
MDASTASTDSATGHDPGSKTLVVSGGATFLPNHQGKVGSHSAQTFNGNQTMNSHNSGSAA
PPGGTTVTSGSSNSSSPAMSVTAVTSGPVLSKGPAAASVPPLANTVIQTPLMNSQSVVAS
AQTTGATVTLARPPMQTAGSGATLNGNNTASPGVAVSAAGVGAQTPLVNNSQPSNSVSGS
HIIKAEPPTTIIQAAPQPAAGAASAPRTPVSVAAGAGGIRALTPQMLAPRLPQTSPGQPS
VHNIQLPPGMVLVRSESGQLLMIPQQALAQMQAQAQAQGGMAPRTTTPTNVPPSQAPGNT
IISRQASSSTIIRQGCPTPTSLAATTTLHRPPILPSTVGAAVPGITPRTVSQTTGATVTS
VTLSKETMENVKKCKNFLSTLIKLASSGKQSTETAASVRELVKDLLEGKLEAEEFTSRLY
KELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQLPQPASGPASSTSPTPTTVVLGS
PAPRPTAPISRPQLQPGLNKPGQTASLILQPQQQRAMLRPQVTLPTTPMMIRNQVPGRIM
LGQQQVQLKELQPVPLRPEVSTVSKQISAAALTSAQKNKLKEAGGTFKDDEDINDVASMA
GVNLSEESANILATNSRLVGVVTHSCKDEAFLSCAMLQRRMLEIGKKYGVTDLGVEVVNY
VSHATQQRLQNLLEKVSEVAQQKNITFKEDDNYEQSSDVRVQLKFFEQLDQLEKQRKEEQ
EREILLKAAKSRARQEDPEQLRLKQKAKEMQQQELAQMRQREANMTALAAIGPRKKRKNL
DSPSSSASAEGSGTGPSLSGGPGSSGSRPTRQRITRVNLRDLLFCLENERFTNRSHFLYK
GFLK
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggacgcatcgacggccagcacggactccgctacgggacacgaccctggcagcaaaaca
cttgttgttagcggcggtgcaactttcctccctaatcaccaggggaaagtaggctcacac
tcagcgcagactttcaatgggaaccaaactatgaactctcacaattcaggaagcgctgcc
cctccaggggggacgacagtgacaagtggctccagtaacagcagcagccctgcgatgtct
gtcacggctgtcaccagcggaccggtgttgtccaaagggccggccgctgcctcggttccc
cccttggccaacactgtcatccagacgccgctcatgaactcgcagagtgttgtggcttca
gctcagacgaccggagccaccgtgacgctcgccaggccgcctatgcaaaccgcggggtcg
ggtgcaactttgaatgggaacaacactgcgagccccggtgtggctgtcagtgcagcaggt
gtcggcgctcagactccgcttgtaaacaatagccagccgtccaactctgtgtctggttcg
cacatcatcaaggcagagccacccacaactatcatacaggcagcaccgcagcctgcagcc
ggagccgccagtgctccccggactcccgtgtcggtggctgccggtgctggagggatccgg
gccctgacgccccagatgttggcccccaggctcccccagacctctccgggacagcccagt
gtacataacatccagctccctccggggatggtacttgtacgcagtgagagcggacagctg
ctgatgattcctcaacaggctctggcccagatgcaagcccaggcccaggcgcagggaggc
atggcacctcggaccactacacccacaaatgtgcctccaagccaggctcctggaaacacc
atcatcagcagacaagcgtcttccagcaccatcatccgacagggctgcccaaccccaacg
tcactcgctgcgaccaccactcttcacagacctccgatccttccgagcacagttggggcc
gcagtaccaggaattacccctaggacagtcagccaaacaactggggctacagttacctca
gtaacattgagtaaagagacaatggagaatgtgaaaaaatgtaaaaactttctgtctaca
ttgattaagctggcatccagtgggaaacagtccacagagactgcagccagtgtgagagag
ctggtcaaggacctgctggagggcaaactggaagctgaagaattcaccagcagattgtat
aaagagctcaactcctcaccccaaccttatcttgtgcctttcctcaagagaagccttccg
gccttgaggcagctcaccccagactctgcagctttcatccagcagagtcagctcccccag
ccagcctcaggtccagcctcttccacctcacccacccccaccaccgtggtactgggcagc
ccggcccctcgacctactgctccaatcagtaggcctcaactccagccaggccttaacaaa
ccaggacagacggcctcactgattctccagcctcagcaacaaagagcaatgctgagacct
caggtaactttaccaacgacccccatgatgatcaggaatcaggtccctggtcgcatcatg
ctgggacagcaacaggtgcagcttaaagagctgcagccggttcctttgaggccagaggtg
tcaactgtttccaaacaaatctctgctgcagccttgacttcggctcaaaagaacaagttg
aaagaggcgggtggtactttcaaagatgatgaagacatcaatgacgtggcctcgatggcc
ggagtgaacctatcagaggaaagtgctaatatcctagccacaaattccagactcgtggga
gtggtgacacattcctgtaaggatgaggcttttctctcgtgcgctatgctgcagaggaga
atgctggagataggtaagaagtatggagtgacagacctgggcgtggaggtggtgaactat
gtctcccatgctactcagcagcgactccagaacctgcttgaaaaagtctcagaagtagcg
cagcagaaaaacatcactttcaaggaagatgacaactatgagcagagcagtgatgttcgc
gttcagctcaagttttttgagcagctggaccagttagagaaacagcgaaaggaggaacag
gagagagagatcctcctgaaagcagctaagtctcgagctcggcaagaggatccagagcag
ctgcgtctgaagcagaaggcaaaagagatgcaacaacaggagttggcccagatgagacag
agggaggccaacatgacggctctggcagccatcggccccagaaagaagaggaagaatctg
gactctccatcctcctctgcttcagctgagggatcaggaacaggtccctctctgtctggt
ggacctggttcttcaggatccagacccacacggcagcgcatcacacgtgtcaatctcagg
gacctgctcttctgtttggagaacgagagattcaccaatcgctcccatttcctctacaag
ggctttctcaaatag
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