Amphiprion ocellaris (clown anemonefish): 111570600
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Entry
111570600 CDS
T06018
Symbol
rnf6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aoce04121
]
111570600 (rnf6)
Enzymes [BR:
aoce01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111570600 (rnf6)
Ubiquitin system [BR:
aoce04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111570600 (rnf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_4
zf-RING-like
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
111570600
NCBI-ProteinID:
XP_023129259
Ensembl:
ENSAOCG00000027283
LinkDB
All DBs
Position
22:15697796..15703602
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AA seq
719 aa
AA seq
DB search
MDPPGGGDERRRQAERLRREEAYYHFINELSEEEYRLMRDSNLLGTPGEVTAEELRQRLD
GAKERVSSQPRTEQRLQTAESGEQQSSSSEGEERGAGGRRVPGGTEPGAEASNGDSLLEW
LNTFRRTGNATRSGQSGNQTWRAVSRTNPNSGEFRFSLEININHDQPEPGEHSDTVDTAE
LPVTAPNSNSPSIRTASTFSSSRPSATPRPAPYPSTRPTISRRMQTRRTRSSTTTLSMSP
PALPPPVATPTTAQRRGATLHSLAPPPTVSNPPLDQATSLQHQVLNVEEDQGRDDVSASI
DCPRVSPQSGSQDPAVGHESRGSRTRSRGRARRAAAGNGVSSRVSRRSRSPLHRIPVVST
TSPSSSGVSGSTVHTVEPGSGTTSVSVETGEAVSEPVVLTEPAAEAGERESESHVIGAGS
SAVRRHPTIMLDLQVRRIRPGENRDRDSIASRTRSRARVAENTVTFESDSGGFRRTISRS
ERAGIRTYVSTIRIPLRRISETGLGEPNSTALRSILRQIMTGFGELSSLMETEADSETVA
PSHTDASGTNSNISPAGRLHTHESAPGQVGTGGVVQERVGLVASEEDQGGQARLGGGVVS
ATDGRATSRDTNNLVENGTLPILRLAHFFLLNDEEDDEHPRGLTKEQIDNLSTRTYGQAN
LEGEMGRACSVCINEYAQGNKLRRLPCSHEFHIHCIDRWLSENNTCPICRQPILAVHHD
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggaccctcctggtgggggagacgaacggcggaggcaggcagagcgtcttcgacgggag
gaggcatactatcacttcattaatgaactgagtgaagaggagtaccgcttaatgagagac
agcaacctgctgggcaccccgggagaggtgactgcagaggagcttcggcagcgtctggat
ggcgcaaaagagcgtgtgtcatctcagccccgtactgaacagcgcttgcagactgctgaa
tccggagagcaacagagcagtagcagtgaaggagaggagagaggggctggagggaggcgt
gtgccaggaggcacggagcctggagcagaagcttctaatggtgactcactactggagtgg
ctgaacactttcagacgcactggtaatgctactcgcagtgggcagagtggcaatcagact
tggcgtgctgtgagtcggaccaaccctaatagtggagagttccgttttagcctggagatc
aacatcaaccatgatcagccggaaccaggggagcatagtgacactgtggacactgcagag
ctgccagtgactgccccaaactcaaattcaccttcgatacgcactgcttccaccttctct
agctctcgcccttcagccacaccaaggccagccccgtatccctccacccgcccaaccatc
agcaggaggatgcagacacggcgtacacgcagcagcactactacactttctatgagcccc
cctgcacttcctccaccagtggccaccccgaccactgctcagaggagaggggccactttg
cactctttagcaccacctcccactgtttccaaccctcctctggatcaagcaacatcttta
caacatcaagtcctgaatgtagaagaagaccaggggcgtgatgatgtgtctgcttctata
gactgtccccgggtgtcaccccagtctgggtcacaggacccagcagtgggacatgaatcg
cgtggcagtaggactcgatcgcgtggccgtgcacgcagggctgcagcagggaatggggtt
tcgtctcgtgtgtcaaggcgaagtcgttcccctttgcacagaatacctgttgtcagtacc
acttcgccatccagcagtggcgtcagtggctctacagtccatactgttgaaccaggcagt
ggcacaacctctgtgtcagtggagactggcgaggctgtgtcagaaccagttgttctgacg
gagccagctgcggaggcaggagaacgtgagagtgaatcacatgtaataggagcaggaagt
tcagcagtgcggcggcatccaactatcatgttggaccttcaggttagaaggattcggcct
ggtgaaaaccgtgatcgggacagcattgctagcagaacaagatctcgtgcccgggtggct
gaaaataccgtcacgtttgaaagtgacagtggtggatttagacgcaccatttcccgctct
gagcgagctgggatccgcacctatgtgagcactatccggattccactaaggcgcatcagt
gaaactggtctgggggaacccaactcaaccgccctgcgctccatcttgcgccagatcatg
actggatttggagagcttagctccctcatggagacagaggctgattctgaaactgttgca
cctagccacacagatgctagtggtacaaatagtaatatcagtccagctggtcgtctgcat
acacatgagagcgcgcctggccaggttggtacaggtggggtggttcaggagagggtgggg
ctggtggcaagtgaagaggaccagggtgggcaggccagactcggaggaggagtagtgagt
gccacagatggacgagccaccagcagagacaccaacaacctggtagaaaatggtactcta
cccatcctgcggttggcacacttcttcctgctcaatgatgaggaggatgacgaacatcct
aggggcctgaccaaagagcagattgacaatctatcgacacgtacctatggtcaggccaac
cttgagggggagatgggtcgtgcatgtagcgtctgcatcaatgagtatgctcaaggcaac
aagctgcgccgcctgccctgctcccatgaattccacattcattgcattgaccgctggctc
tctgaaaacaacacctgccccatctgcaggcagcctatacttgcagtgcatcatgactga
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