Amphiprion ocellaris (clown anemonefish): 111570708
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Entry
111570708 CDS
T06018
Name
(RefSeq) aggrecan core protein-like isoform X1
KO
K06792
aggrecan 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
aoce00535
]
111570708
00536 Glycosaminoglycan binding proteins [BR:
aoce00536
]
111570708
04091 Lectins [BR:
aoce04091
]
111570708
Proteoglycans [BR:
aoce00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
111570708
Glycosaminoglycan binding proteins [BR:
aoce00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
111570708
Lectins [BR:
aoce04091
]
C-Type lectins
Lecticans
111570708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
EGF
V-set
hEGF
PT
I-set
Izumo-Ig
EGF_3
Motif
Other DBs
NCBI-GeneID:
111570708
NCBI-ProteinID:
XP_023129379
LinkDB
All DBs
Position
1:complement(36048122..36077591)
Genome browser
AA seq
1583 aa
AA seq
DB search
MIRQTVLLSLCLNIISATSDYIYEAHSLMDPEDVLSISIPLEEPQRPLLGGTIVLPCYFE
DHTVPDPGAPTIAPLSHRIKWSHVTKEKVTTVLVALEGEVLIGDSYVDRVHLLGYPNTPT
DASIKISELRSSDSGVYRCEVQHGIEDNHDIVHIQVQGIVFHYRAIMGRYTLTFEKAKAA
CAQNNAVVASPEQLQAAYDDGFHQCDAGWLSDETARYPIHDPRMNCYGDKEQLPGVRTYG
IRDVNETYDVYCFAEKMTGKVFHTTTAEKFTFSEAAAACLNKGAQLATTGQLYLAWQGGM
DVCNPGWLGDRSVRYPINIRRPQCGGGMLGVRTVYLYSNQTGFPLPESRYDAFCYTGSPD
EEGSGIIEEGSGVLSVTTVTRSPQVFFVRTTTESEAVGEVETRQPTNVDFIYTQSPIESP
TETPTKTPTESPTETPTESPTETPTKTPTEGPTETPTKTPTEGPTETPTKTPTKGPTETP
TEAPTENPTETPTEAPTENPTETPTKTPTESPAELPLPQPPSITDQIEAVTAQPDVGREP
SKGFEMPPAGVVFHYRSGVGRYTFTFVEAQLACLSIGGSIATPQQLQAAYEAGYHQCDAG
WLLDQTVRYPVVFPRDGCAGNLGFEPGVRSYGLRPADEKYDVYCYTEGLKGEVFHVRSAE
GFTYDEAASSCQEQNAVLASTGDLYAAWKMGLDKCRAGWLVDRSVRYPINNPRPQCGAGK
AGVRTVYVHPNQTGYPEPDAKFDAYCFKANIQLIANETGLNITDIQEALVNLTSITDLLR
PDPSIAPPIPVEASGSGSGSADFGSGSAVDGASGDQSGSGDQSGSGDQSGSGDLSTSGDG
VASGAGSGSGDLSGSGQLSSSGDGVISGDQSSSGDQSGSGDGVVSGVESGSGDLSGSGDQ
VTSGFESASGGLSGSGDLAGSGESGLGSADASGSGLSGEGSGISVVFSGTDSIFSAEGSA
SGGVQEAGEGSTEILIFPSSDSGSGELSGSGDLPLSGSGSGFGSGESGQSFGMSSGFTTS
EDFSGFSGFPSGFASGSGSGQSGDLSGSGEAPILLIDYELIEASTAVTHKEYELGGGRLA
FSGSGDFSESGVASGDLSGSGSGSGTELLSGVTLMGSGFTELIGSSSGEQEASGFLLYSS
GEGSGEHLFGFGSSTFLSGSGSGMSGSGMSESESSASRDESSVTFLTGHIMTKTVGDPTR
SMELGQGLVEYLGEGSGSGSGSGSGSGFYSGSGDSSTMFSGATSGDQVVVPSLSSEPTPA
ESITEPEEAFNRTELPETPDDVYVTISPALIPAGLAAPPVSPTPASVQSPGNTEGVTLCE
PNPCGNTTCTVQDGVAVCDEVEVCDSNPCANGATCVENADSFKCLCLPSYGGKRCEIEEL
QCEDGWTQFQGSCYLHFANRETWLDAEQRCRDLNAHLVSIVTPEEQDFVNSNAQDYQWIG
LNDKTVENDFRWTDGTPMQYDNWRPNQPDNYFNSGEDCVVMIWHENGQWNDVPCNYHLPF
TCKKGPASCGAPPEVENARMFGKKKLDYPVNAIIRYQCNPGFRQRFPPVVRCRADGLWEK
PQVECTDVKSRKRIKPATSITKK
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggcagactgtgctgctgtccttgtgtctgaacatcatctcagcaacgtctgat
tacatttatgaagctcattcactgatggacccagaggatgttctgagcatcagcatccct
ctggaggaaccacagcgccctctgctgggaggaacgatcgtactaccgtgttactttgag
gaccacacagttccagaccctggagctccaaccatcgctcctctttctcatcgcatcaaa
tggagccacgtcaccaaggaaaaggtcacgaccgtcctcgtggccttggagggggaggtg
cttatcggcgacagctatgtggacagagttcacctgctgggataccccaacaccccgacc
gacgccagcatcaagatatctgagctgagatccagtgatagcggagtttatcgctgtgag
gttcaacacggcatcgaagacaaccatgacatcgtccacatccaggttcaaggcattgtg
ttccactaccgggccattatgggtcgctacactttgacttttgagaaggcgaaggcagct
tgtgctcagaacaatgcggtcgtggcttcacctgaacagctccaagcagcctacgatgat
ggtttccaccagtgtgatgccggctggctctctgacgaaacagccaggtatccaatccac
gatcctcgtatgaactgctacggtgacaaagaacaacttcctggtgtcagaacttatggc
atcagagacgtcaatgagacttatgatgtttactgtttcgctgagaagatgacaggcaaa
gttttccacactactactgctgagaagttcaccttctctgaagcagcggcggcttgttta
aataagggagctcagctggccaccaccggtcagctgtacctggcctggcagggagggatg
gacgtctgtaaccccggctggttgggagacagaagcgtccgatatcccatcaacattcgt
cggccgcagtgtggaggaggcatgctgggggtccgaacggtttacctctactctaaccag
acaggattccctcttcctgagtcccgttatgatgccttttgctacaccggctctcctgat
gaggaaggttcaggcatcatcgaggagggaagcggcgtgctgagtgttaccacggtgaca
cgaagccctcaggtgttctttgtgaggacgaccacagagagcgaggcggtcggggaggtg
gagactcgacagcccaccaatgtggacttcatctacactcagagccccatcgagagcccc
acagagaccccaaccaagaccccaacagagagtcccaccgagactccaacagaaagcccc
accgagaccccaaccaagactccaaccgagggccccaccgagaccccaaccaagactcca
actgagggccccaccgagaccccaaccaagactccaaccaagggccccaccgagacccca
accgaggccccaacagagaaccctaccgagaccccaaccgaggccccaacagagaaccct
accgagaccccaaccaagaccccaactgagagccctgctgagctaccactgcctcagccg
cccagcatcactgaccagatagaggctgtcaccgcccagccagacgtaggcagggagccc
agcaaaggctttgagatgcctccagctggtgtggtcttccattatcgttcaggcgtcggc
cgctacaccttcactttcgttgaggcccagttggcctgtctgagcattggaggctctatt
gctactccacagcagcttcaggcagcgtatgaggctggataccaccagtgtgatgcaggc
tggctactggaccagactgtgaggtatcctgttgtcttcccaagagatggatgtgcagga
aacctgggatttgagcctggagttcggtcctacggtctgagacctgcagatgagaaatat
gatgtgtactgctacactgaggggctcaaaggagaggttttccatgtgaggtccgctgag
ggtttcacctacgacgaagctgcttccagctgtcaggagcagaacgctgtgctggcctcc
actggagatctctatgcagcctggaaaatgggtctcgataagtgtcgtgcaggctggctg
gtggatcgtagcgtccgttatcccatcaataacccccgtcctcagtgtggagcaggaaaa
gcaggagtacgcacagtttacgttcaccccaaccagactggctatcccgagcctgatgcc
aaatttgatgcatactgtttcaaagcgaacattcaacttattgcaaatgaaactggactg
aacatcacagatatccaggaggctcttgtaaacctgacatccattactgatttgttaagg
cctgatccctccatcgctcctcccatccctgtggaggcttcaggctctgggtctggatca
gcagacttcggctcagggtctgcagttgatggtgcctctggagatcagtctggttctgga
gatcagtctggttctggagatcagtctggttctggagatctgtctacctctggagatggt
gttgcttctggagctgggtctggctctggagacctatctggttcaggacaactgtctagt
tctggagacggggtcatctcaggagatcagtccagttctggagatcagtctggctctgga
gatggagttgtctctggagttgagtctggctctggagacctttctggttctggagatcag
gtaacctctggatttgagtctgcttctggaggcttgtctggttctggagacctggctggc
agtggagaatcaggtctcggcagtgcagatgcttctggatcaggcctcagtggagaagga
tccggcatctctgtggttttctcaggaactgacagcattttctcggcagagggctcagct
tcaggaggagtccaagaagccggagagggaagcactgagatcctcatcttcccttcatct
gattcaggctctggagagctcagtggtagcggggatctgcccttgtctggttctggttct
ggttttgggtctggggaaagtggacaatctttcggcatgtcgtctggtttcaccaccagc
gaggacttttctgggtttagcggtttcccatcagggtttgcctcaggaagtggtagtgga
cagtcaggagacctttcaggaagtggagaggctccgattttactgatagactatgaactg
atcgaggcgtccacagctgttactcacaaggagtatgagctaggtggcggtcgtctggcg
ttcagtggttctggagatttttcagaatcaggggttgccagtggcgacctcagtggctct
ggctctggaagtggcactgaattactctctggtgtaaccttaatgggatcgggctttact
gaactcatagggtcgtcctccggagagcaggaggcctccgggtttttactctacagctcc
ggagagggtagtggtgaacatttgtttggattcggaagttcaacatttctttcagggtct
ggatcgggaatgtctggctcaggaatgtctgaatccgagtcctctgcaagcagagacgaa
agcagtgttacattcctgactggacatattatgacaaagacagtcggagacccgacacgc
tctatggagcttggacaggggttggtagagtaccttggagaaggaagtggcagcggcagc
ggcagcggcagtggcagtggattttactctggtagtggagactccagcaccatgttttca
ggagctacttctggagatcaagtggtggtgccctctctgtccagcgaaccaacaccagca
gaaagcattacagaaccagaagaggcctttaatcgaactgaacttccagagactcctgat
gacgtctatgtgaccatcagtcctgctcttatccctgcaggactggcagctcctcctgtt
tcaccgaccccagcctccgtacagtcaccaggcaatacagaaggtgtgaccctttgtgaa
cccaacccttgtggaaacactacatgcacagtacaggatggagttgctgtctgtgatgag
gtagaagtgtgcgattccaacccttgtgccaatggagccacctgtgtggagaacgcagac
tctttcaaatgcttatgcctgccgagctacggagggaaacgctgtgagatcgaggagctg
cagtgtgaagacggctggactcagtttcagggaagctgctaccttcattttgccaacaga
gagacgtggttggacgctgagcagcgctgcagagacctgaacgctcacctggtcagcatc
gtcacacctgaggagcaggactttgtcaactctaatgctcaggactaccagtggatcgga
ctgaatgacaagacagtagaaaatgacttcaggtggacagacgggactccgatgcaatat
gacaactggaggccaaaccagccggacaactactttaactccggagaggactgtgtggtg
atgatctggcatgagaacggccagtggaacgacgtcccctgcaactaccaccttccattc
acatgcaagaaaggcccagcatcttgcggagcccctccggaggtggaaaatgcccgtatg
tttggtaagaagaagctggattatcccgtcaacgccatcatccgctaccagtgtaaccca
gggttcagacagcgttttccgccggttgttcgctgtcgagcagacggactgtgggagaaa
cctcaggtggaatgtactgatgtgaaatccagaaaaagaataaagcctgcaacaagcatc
actaagaagtga
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