Amphiprion ocellaris (clown anemonefish): 111570908
Help
Entry
111570908 CDS
T06018
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X2
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoce04131
]
111570908 (hps3)
Membrane trafficking [BR:
aoce04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
111570908 (hps3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
111570908
NCBI-ProteinID:
XP_023129676
Ensembl:
ENSAOCG00000022280
LinkDB
All DBs
Position
2:16770915..16792948
Genome browser
AA seq
1032 aa
AA seq
DB search
MVHVYNCHPFASQQIVQVEQEPGLVCCGCGVLFVVATGGCKVEAYSLEKEGCPLICRFAT
MGTVRSIQHSKIGDYLVTIEEKNSATYLRAYTNWRYQAEEKARVGVRLLGHLLRGASVWG
GVQMEIIEIPLSERPVAVSCCSVTGDLLVGCQNTLVLFTLRRQNQQNLNQSQQNPQSPSS
NTQQSCSQSQGQTASSNSNLSVLDFERSVILHLPRITPRQVALCGGYVAVQAELEVLVLK
LEAMFEMKAPEESSDTNKSNYLEDEIDFLLIPRHVELLGDRAKDCDIPVSIEKTGLEDRG
QYSLSYILFRRFSPEFFQGCSVEETHLHSLQLYPLFTSNQSATLDEPACVFCFFSLPNAG
YLYSLKGGVELLSAYQYPEKVLEAVLTDHLLHVITKSALQCFTVRCSAVAARIEDPYIDT
TMKACPPSNLEVCALRMQLFIGLRSVCVYGRHVILLSTADTETPEETERSTQRRGLSRKW
TISAPKETSKAGHGWNIYVVDTVSPLTLYQEMVEYSQRYAETSPQAQSLRHLLSEAHLLL
RASVLQKSRQQQNHDPTASVQTDGQELEEAVRQNCAQLGDCFSRGSQKDCHLTLPYYRMS
GLSVTEVISRNRPLPGSPHSYGPGFLFYLRHYLLEETEQNLSQEAADEVIHIFSQSEPSQ
LISVCASASMINISPDRTLRILQHLEDTTCVSVPLTITMATLMLRLGDLPQYTQLMERHA
EMLLVYGFIEEPRLLLLHVEGGGGEDRHAHIRPTALAQQLAKSQPGLLVAAMVALHENNK
VLLEQADHVFKELGCENCLQVDFWETMLMASSQDAIIQELLFRVASVYIDRLTNSDTHSS
LPHAAPKRKSLKSADDLISSCSHYGALYPWLTVLSPAHTTSSQHQEALHKLQSLLCGPSL
SVGSVVPLLERLSEETLWGFSLHLLCATRRGQYGSSIEKLLDRCPQAIIAFANHQLQDKN
MVLWWQKLLPELCNRTRAAAENSILLAALKETLVVVAMEMSPAEFLELIPDDGTASYFLP
HLLTCSQRHLMT
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacgtctacaactgccatccttttgcctcccagcagatcgtacaggtggagcag
gaacccgggctggtctgctgtggatgtggagtcctgtttgtagtggcaactggaggatgc
aaggtggaggcctacagcctggagaaggagggctgtccactcatctgtcgctttgccacc
atgggcactgtgaggagcatccagcatagtaaaataggagactacctggtgaccattgaa
gaaaagaacagcgccacctacctgagagcctacaccaactggcgctaccaggccgaggag
aaggctcgtgtcggggtgcgtttgttgggccacttgctgcgtggagcgtctgtgtggggc
ggagtgcagatggagatcattgagatccctctgtcggagcgtcccgttgctgtgtcttgt
tgctcagtgacaggagaccttctggtcggctgtcagaacactctggttctgtttaccttg
aggagacaaaaccagcagaacctgaatcagagtcagcagaaccctcagagcccctcatcg
aacactcagcagagctgcagtcagagtcaaggtcagactgcaagttctaactctaatctt
tctgtcctggattttgaacgctccgtcatcctgcatcttccaagaatcacgccaagacag
gtggcgctatgtggaggatatgtggccgtgcaggcagagctggaagttctcgtactgaaa
ttggaagcaatgtttgaaatgaaagctccagaagaatcatcagacacaaataaaagcaat
tatctcgaagacgagatcgactttctgctcattccgagacacgtggagttgctcggtgac
cgagccaaagactgcgacatccccgtcagcattgaaaagaccgggctggaggacagggga
caatattcactgtcctacatacttttcaggcgtttttctccagagttcttccaaggctgt
agtgtggaggagacacacctccactccctgcagctctacccactgttcaccagcaaccag
tcagcgactctggatgaaccagcgtgtgtgttctgcttcttctctctccccaacgccggc
tacctgtacagtctaaagggcggagtcgagctgctctcagcctatcaatatccagagaag
gtcctggaggcggtgctaacagaccatctgttgcatgtcataacaaagagtgcactgcag
tgtttcacagtacgttgttcagcagtagcagccaggattgaagacccttacattgacact
accatgaaggcttgtccacccagcaacctggaggtgtgtgcgctcaggatgcagttattt
attggtctgaggtcggtgtgcgtctatggccgccatgttatcctgctgtccaccgcagac
acagagacaccggaggagaccgaacgcagcacacagcgcagaggcctgagcaggaagtgg
acgatctctgctcccaaagaaaccagcaaggcaggacacggatggaacatctatgttgtc
gacaccgtctcccccctcactctctaccaggagatggttgaatacagtcagcgctatgca
gagaccagtccacaggcccaaagtcttcggcacctcctcagcgaggctcacctcctcctc
cgggcctccgtactccaaaagtcaagacagcaacagaaccatgaccctacagcatctgtg
cagacagacggacaagaactggaggaggcagtcaggcagaactgcgcccagctaggagac
tgcttcagcaggggcagtcagaaggactgccacctgactttgccgtactacaggatgtct
ggtctgtcagtcaccgaagtcatctccaggaaccggccacttccaggcagccctcactcc
tacggtccaggcttcctgttctacctcaggcattatctgctggaagaaacggagcaaaac
ctcagtcaggaagcagctgatgaggtcattcacattttcagccaatcagagccctcacag
cttatcagtgtgtgtgccagcgcatccatgataaacatcagtcctgaccggaccttgcgg
attttacaacatctggaggatacaacgtgtgtgtcggttccactgacgatcaccatggca
accttgatgctgcgtttgggtgacctgccgcagtacacacagctgatggagagacacgct
gagatgctgctggtgtacgggttcatcgaggagccgaggttgctgctgctgcacgttgaa
ggaggaggaggagaagatcggcacgctcacatccgtcccacagcgttggctcagcagctg
gcaaagtcccaacctggcctactggtggctgccatggtggctttacatgagaacaacaaa
gttctgctggaacaggctgatcacgtattcaaggagttgggctgtgagaactgcctacag
gtggatttctgggagacgatgctcatggcatcttcacaggacgccatcatccaggagctt
ctgttccgggtggcgtctgtctacatcgaccggctgacaaactcagacacacacagcagc
ctcccccatgcagctccaaaacgcaagtcactgaagagcgctgacgatctgatcagctcg
tgctctcattatggcgctctgtacccgtggctcactgttctcagtccagctcacaccacc
agctcacagcaccaggaggcgctgcacaaactgcagtctctgctgtgtggcccgtccctg
tctgttggctccgtggtgcctctgctggagcgtctgtcagaggaaaccttatggggcttc
agtctgcacctcctctgtgccaccagaagggggcagtatggcagcagcatagagaagttg
ctggacagatgtcctcaggccatcatagccttcgcaaatcaccagctacaggacaaaaac
atggtgctgtggtggcagaagctgctcccagagctttgtaaccggacaagagcagctgca
gaaaacagcatcctattggctgctctcaaagagacgctggttgtcgttgccatggagatg
agccccgcagagttcttggagctgatacctgatgacggcacggcatcctacttcctgcct
cacctgctgacatgcagccagagacacctgatgacctga
DBGET
integrated database retrieval system
