Amphiprion ocellaris (clown anemonefish): 111570931
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Entry
111570931 CDS
T06018
Symbol
abca1b
Name
(RefSeq) phospholipid-transporting ATPase ABCA1b isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce02010
ABC transporters
aoce04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111570931 (abca1b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111570931 (abca1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aoce02000
]
111570931 (abca1b)
Transporters [BR:
aoce02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
111570931 (abca1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
111570931
NCBI-ProteinID:
XP_054872763
Ensembl:
ENSAOCG00000021345
LinkDB
All DBs
Position
13:24799864..24862801
Genome browser
AA seq
2295 aa
AA seq
DB search
MSVFTQLGLLLWKNFTYRRRQTLQLLAEIVWPLLIFFILIAVRLNYPPYEQHECHFPNKA
MPSAGTLPWIQGILCNANNPCFRNPTPGESPGVVGNFNDSIINRLFSDAKKILLYSQNDK
NLDGFKELARALQALQSSRSGFKLKHFLRDNETLSSFLLRNASFPEHSVQHITEADVNLE
KVLLKGFGVHLRDMCLQKGGRHRLEDFVTISDQQSSMLVQEVICRAPPTWLNHAEQHFMD
NLDFLKPIRRDVTSDPEAVQQVAKATNKLLDSLGLLAVELASMKSWVDLRNEIVFLTKNA
TSSPSTMYQAVSRIVCGHPEGGGLQIKSLNWYEDSNYKALFGNHNSSEDEPAALYDNSST
PYCNSLVSSMDSNPMSRMIWQAVKPLLMGKILYTPHTPATQRIIHEVNRTFQELGVFRDL
GGMWEEMRPKVWNFMENSEQMDLIRTLLKNNATASVFHTQLSNTGWTVADVSNFLSKKAE
DRPAGAALTWREVFNETDQAIMSISRFMECVNLDKLQPVSTEERLVNQSMLLLEDRKFWA
GIIFPDIPPNATELPPKLNYKIRMDIDNVERTNKIRDAYWDPGPRADPFEDMRYIWGGFS
YLQDVIEQGIIRAVTGTKEKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAI
ILKSVVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLISAALLVLLLTKGNLLPYSD
PSIVFLFLGSFAVVTIMQCFLLSTAFARANLAAACGGIIYFTLYLPYVLCVAWQDYIGFG
AKVFASLLSPVAFGFGCEYFALFEEQGVGIQWKNLVSSPMEEDDFSLRTAIIMMYFDSFL
YGVLTWYIEAVFPGQYGIPRPWYFPFTKSYWLGEKDGKSNKIPLKRTGNPGAVCMEEEPA
HLEPGVYIENLVKVYRHGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPT
SGTAYILGRDIRTDLSAIRQSLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEQVKSEIE
QILQDTGLPHKRNSRTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDL
LLQYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLYLKNQLGTGYYLTLVKKE
PEPSLSSCRNSTSSVSFTKKEEECASVSSSDAGLGSEHESEAATIENGPAASICSVPFVP
PDVSLVSGLILRHVPAARLVEDLGHELTYVLPYSAAKDGAFVELFRDLDVKLPDLGISSY
GVSDTTLEEIFLKVAEDNGVDTEVPSDGTLPVQRRRRTHAFGGGDHQSCLKPLTEDDNND
CNDSEGDPECRETDWLNSTDGKGSYQVRGWSLKRQQFVALMWKRFLYARRSRKGFFAQIV
LPAVFVCIALVFSLIVPPFGKYPSLELQPWMYEDQVTFISDDAPGDANMQKLLNSLLDAP
GFGTRCMDGHPIPEAPCTMGDEDWHTPDVPDSVQQLFSSRNWTMEDPSPACFCSCDGRKK
MLPDCPPGAGGLLPPEMMLSATDTLQNLTGRNISDYLVKTYAQIIGKSLKNKVWVNEFRY
GGFSLGARSTQVLPPANEIDDAIDRVRKIFELQKGAAADRFLDSLSGFINGLDTKNNVKI
WFNNKGWHSIGAFINVMNNGILRAHLPAGADPSRYGISAFNHPLNLTKEQLSQVALVTTS
VDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHMQFISGVQPLLYWVANFIWDMCNYIV
PATLVILIFVCFQQKAYVSSTNLPVLALLLLLYGWSITPLMYPASFFFTIPSTAYVVLTS
VNILIGINGSISTFVMELFGNNEIGGINDILKNVLLIFPHFCLGRGLIDMVKNQAMADAL
ERFGENRFRSPLEWDMVGKNLFAMAVEGVVFFIITILIQYRFFIKPRPVSKLTKLGALGD
EDEDVARERQRIFHGLGHGDILELRQLTKVFKRKQKPAVDRLCVGIPPGECFGLLGVNGA
GKTTTFKMLTGDTVVTSGEAFLAGKSILREIDEVHQNMGYCPQFDAINELLTGREHLELY
AVLRGIPEKEVCDVAEWGIRKLSLAKYADKAAGSYSGGNMRKLSTAMALIGAPPVVFLDE
PTTGMDPKARRALWNCIHSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQH
LKNRFGDGYTIILRVTGHDPDLLPVMKFIESELSGSTLKEKHRNMLQYQLPSSLTSLAHI
FSILAQNKDTLCIEDYSVTQTTLDQVFVNFAKDQSDDYHSKDNSVRRKDVAIEVPLLSST
CGAATAGGELRESVM
NT seq
6888 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcttcacacagctggggctgctgctgtggaagaacttcacctacagacgacga
cagacgctccagctgctggcggagatcgtctggccgctcctcatcttcttcatcctcatc
gccgtgcgtctcaactaccctccatacgagcagcatgagtgtcattttcccaacaaggcg
atgccgtcggcaggaacgctgccctggatccagggcatcctctgcaacgccaacaacccc
tgcttcaggaacccgaccccgggcgagtcaccaggcgtcgtgggcaatttcaacgactcc
ataattaatcgtctgttctcagacgccaagaagattctcctctacagtcagaacgacaaa
aatctggatggcttcaaggagctggctcgagctctgcaggcgctgcagagcagccgctca
ggcttcaagttgaagcatttccttcgggacaatgagactctgtcgagctttctgctgaga
aacgcctccttccccgaacacagcgtccagcacatcacagaggccgacgtcaacctggag
aaggtcctcctcaaaggttttggtgtccacctcagagacatgtgtctgcagaagggcggc
cggcatcgtctggaggactttgtgaccatctcggaccaacagtcgtcgatgctggtacag
gaagtcatctgtcgggctccgcccacctggctgaaccacgctgagcagcacttcatggac
aacctggacttcctcaaacccattcggagggacgtgacgtctgaccccgaggccgtccaa
caggttgccaaggcaaccaacaaactcctggacagtctgggtttgctggcagtcgagctg
gccagtatgaagagctgggtggacctgaggaacgagattgtgttcctgacgaagaacgcc
acgtcgtcacccagcaccatgtaccaggccgtgtcccggatcgtgtgtggtcaccctgaa
ggcggcggcttgcagatcaagtccctcaactggtatgaagacagcaactacaaggctctg
ttcggcaaccacaacagcagcgaggatgagccggcggcgctctacgacaactcgtccact
ccgtactgtaacagcctggtgagtagcatggactccaacccgatgtccaggatgatctgg
caggcggtgaagccactgctgatggggaagatcctgtacacaccgcacacgcccgccacg
cagaggatcattcacgaggtgaaccggaccttccaggagcttggtgtgttcagggacctg
ggcgggatgtgggaggaaatgagacccaaagtctggaacttcatggagaacagcgagcag
atggatctgatcaggactcttttgaagaacaacgccaccgccagtgtcttccacactcag
ctgtccaacactggttggaccgtcgctgacgtctccaatttcctgtccaagaaggcggag
gaccggccagcaggcgctgccctcacctggagggaggtgttcaacgagaccgaccaggcc
atcatgagcatctcccgcttcatggagtgtgttaacctggacaaactgcagccggtctcc
actgaggagcgactggtcaaccagtcaatgttgttactggaggacaggaagttctgggcg
gggatcatattcccagacatcccgcccaacgccactgagctgccgcccaaactcaactac
aagatccgcatggacatcgacaacgtggagcgcacaaacaagatcagagacgcgtactgg
gacccgggtcctcgtgccgacccgtttgaggacatgcgctacatctggggcgggttctcg
tatcttcaggacgtcatcgaacagggcatcatcagagcggtgacgggcaccaaggagaag
acgggggtctacatccagcagatgccgtacccctgctacgtggacgacatcttcctcagg
gtgatgagccgctccatgcctctgttcatgacgctggcctggatgtactcggtggccatc
atcctgaagagcgtggtgtacgagaaggaggcccggctcaaggagaccatgaggatcatg
ggtctggacaacggcatcctgtggttcagctggttcatcagcagcctgattcccctgctg
atcagtgccgcgctgctggtgctgcttctcacgaagggaaacctgctgccctacagtgac
cccagcatcgtcttcctcttcctcgggtccttcgccgtggtgaccatcatgcagtgtttt
ctcctcagcacggcgttcgcccgagctaacctggctgctgcctgtggaggaatcatctac
ttcaccctgtacctgccttatgtgctctgtgtcgcctggcaggactacatcggcttcggg
gccaaagtcttcgctagtctcctgtctcctgttgccttcgggttcggctgtgagtacttt
gctctgttcgaggagcagggggtcggcatccagtggaagaacctggtgtcgagtcctatg
gaggaggatgacttcagcctccgcaccgccatcatcatgatgtactttgactccttcctg
tacggagtcctcacctggtacatcgaggctgtgtttccaggtcagtacgggatccctcgg
ccctggtacttccccttcactaagtcctactggttaggagagaaggatggaaaatccaac
aaaattcctctgaaacggacaggaaaccctggagcggtgtgcatggaggaggagccagct
cacctggagcctggggtctacatcgagaacctggtgaaggtttaccgtcacggtaagaag
ctggcagtggatggactgacgcttggtttctatgagggacaaataacgtccttcctggga
cacaacggagctggaaaaaccaccacaatgtctattctgaccggtctgttccctccgacc
tctggtaccgcctacatcctgggccgagacatccggacggatctgagcgccatcagacag
agtctaggagtctgtccacagcacaacgtcctcttcagcatgctgacggtggaggagcac
atctggttctatgcccggctcaaaggcctgtcagaggagcaggtgaaaagcgagattgag
cagatcctgcaggacaccggtctgccgcacaaacgcaactccagaaccagcaccctgtca
gggggcatgcagaggaagctgtcagtggcgctggccttcgtcggcggctccaaggtcgtg
atcctggacgagcccacggccggcgtggatccctacgcccgcagggggatctgggacctg
ctgctgcagtaccgacagggtcggaccatcatcctgtccactcaccacatggacgaagcg
gacatcctcggcgaccgcattgctatcatctcccacgggaagctgtgctgcgtcggctcg
tcgctgtacctgaagaaccagctgggaactggctactacctgactctggtgaagaaggag
ccggagccgtcgctcagctcctgccgcaactccaccagcagcgtgtccttcaccaagaag
gaggaggagtgcgcctctgtgagcagcagtgacgcaggactaggcagcgaacatgaaagt
gaggccgctaccatcgagaacggccctgcggcgtccatctgcagtgtccccttcgtcccc
ccagacgtgtctctggtgtcgggcctgatcctgcgccacgtccccgccgcccgcctggtg
gaggacctgggacacgagctgacgtacgtgctgccgtacagcgctgccaaggacggcgcc
ttcgtggagctcttcagagacctggacgtgaagctgcccgacctcggcatctccagctac
ggcgtgtccgacaccacgctggaggagattttcctgaaagtggctgaggataacggagtc
gacactgaagtgccctcagatggtacactgcctgttcagaggaggaggagaactcacgcc
ttcggtggaggagaccatcagagctgcctgaaacctttaactgaagacgacaacaatgac
tgcaacgactcagagggagaccctgagtgccgggagacggactggctgaacagcaccgac
ggtaaaggctcgtatcaggtcagaggctggagtctgaagagacagcagttcgtggctctg
atgtggaagcgcttcctgtacgctcgccgctccaggaaaggcttctttgctcagattgtt
ctccccgccgtatttgtctgcatcgctctggtcttcagccttattgttccaccatttgga
aaatatcccagtttggagctgcagccgtggatgtacgaggaccaggtgaccttcatcagc
gatgatgctcctggagacgccaacatgcagaagctgctgaactctctgctggacgctcca
ggcttcgggactcgctgcatggacggacatccaatcccagaggctccctgtacgatgggt
gatgaggactggcacacccccgacgtccccgacagcgtccagcagctgttcagctccagg
aactggaccatggaggatccgtctccggcctgtttctgcagctgcgacggccgcaagaag
atgctgccggactgccctccaggagctggaggtcttctgcccccggagatgatgctgagc
gccacggacactttgcagaacctgacgggaagaaacatctcagactacctggtgaagacc
tacgctcagatcatcggcaagagcttgaagaacaaagtttgggtgaatgagttcaggtac
ggaggcttttcattgggtgccaggagcactcaggtcctgccgccggccaatgagatcgac
gacgccattgatagagtccgaaagatctttgagttacagaagggagctgcagcagatcga
ttcctcgacagtctgtccggtttcatcaacggtctggacaccaagaacaacgtcaagatc
tggttcaacaacaaaggctggcacagcatcggagccttcatcaacgtcatgaacaacggc
atcctgagggctcacctgcctgcaggcgccgaccccagcaggtacggcatcagcgccttc
aaccacccgctgaacctcaccaaggagcagctgtcccaggtcgccctggtgacaacctcc
gtggacgttctggtgtccatctgcgtcatctttgccatgtccttcgtcccagccagtttt
gtagtcttcctcatccaggagcgagtcagtaaagccaaacacatgcagttcatcagcggg
gtgcagccgctgctctactgggtggccaacttcatctgggacatgtgtaactacatcgtc
ccggcaacgctggtcatcctcatcttcgtctgtttccaacaaaaagcctacgtgtcatcg
accaaccttccggtgctcgccctgctgctgctgctctacggctggtccattactcccctc
atgtacccggcgtccttcttctttacgatccccagcacagcgtacgttgtcctcaccagc
gtcaacatcctcatcggcatcaacggcagcatctccaccttcgtcatggagctgtttggg
aacaacgaaatcggaggaatcaatgacatcctgaagaacgtcctcctcatcttccctcac
ttctgtctgggtcgaggactcatcgacatggtgaagaaccaggcgatggccgacgctctc
gagagattcggtgagaacaggttccgctcacctctggagtgggatatggtggggaagaac
ctgttcgccatggctgtagagggagtggtcttcttcatcatcactattctcatccagtac
aggttcttcatcaaacccaggccggtcagtaaactcaccaaactgggagctctgggagac
gaggacgaggacgtggccagagagagacagcggatcttccacggcctcggacacggagac
atcctggagctccggcagctcaccaaggtgtttaagaggaagcagaagccggcggtggat
cggctgtgtgtcggaattcctcccggagagtgtttcggcctcctcggggttaacggagcc
ggtaagacgacgacctttaagatgctgacgggcgacacggtggtgaccagcggagaggcc
ttcctggctgggaagagcatcttgagggagatcgatgaggtccatcagaacatgggttac
tgtcctcagtttgacgccatcaacgagctgctgacaggccgagaacacctggagctgtac
gccgtcctcagaggcatcccagagaaagaagtctgcgacgtggcagagtggggcatcagg
aaactgagtctggcgaaatatgcagataaagcagctggaagctacagcggcggcaacatg
aggaaactgtccacagccatggctctgatcggagcgccccctgtggtgtttctggacgag
cccaccactggcatggaccccaaggcccgccgagccctctggaactgcatccacagcgtc
atcaaggagggacgctccgtcgtcctcacctcacacagtatggaggagtgtgaggctctg
tgcaccaggatggccatcatggtgaacggcaggttcagatgtctcggcagtgtccagcac
ctgaagaacaggtttggtgacggttacaccatcatcctgcgggtgacggggcacgacccc
gacctgctgcctgtcatgaagttcattgagagcgagctaagcggcagcacgctgaaggag
aagcatcgcaacatgctgcagtaccagctgccttcatcgctcacctccctcgctcacatc
ttctccatcctcgcccagaacaaagacacactctgcatcgaagactactccgtgacccag
accacactggatcaggtgtttgtgaacttcgcgaaggaccagagtgacgattatcactcc
aaagacaactctgtgaggcggaaagacgtcgccatcgaggttccactgctgagctccacc
tgcggtgccgccacagcggggggagagctgagggagagtgtcatgtga
DBGET
integrated database retrieval system
