KEGG   Amphiprion ocellaris (clown anemonefish): 111570955
Entry
111570955         CDS       T06018                                 
Symbol
col4a3
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
aoce  Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04382  Cornified envelope formation
aoce04510  Focal adhesion
aoce04512  ECM-receptor interaction
aoce04518  Integrin signaling
aoce04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:aoce00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    111570955 (col4a3)
   04518 Integrin signaling
    111570955 (col4a3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    111570955 (col4a3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    111570955 (col4a3)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    111570955 (col4a3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aoce04147]
    111570955 (col4a3)
   00536 Glycosaminoglycan binding proteins [BR:aoce00536]
    111570955 (col4a3)
Exosome [BR:aoce04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   111570955 (col4a3)
Glycosaminoglycan binding proteins [BR:aoce00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   111570955 (col4a3)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 111570955
NCBI-ProteinID: XP_054868169
Ensembl: ENSAOCG00000027875
LinkDB
Position
7:complement(35173752..35216349)
AA seq 1669 aa
MEPPGGCRSSFVPLPLLVLLLWGSTAPGHAERVCHCSGKSLCHCDGIKGQKGEPGYLRYA
GLPGVIGYPGNEGNPGPAGEKGDRGAAGGSGLKGSRGIPGKPGFPGPPGLPGIPGHEGPI
GRPGVPGCNGTKGDVGFPGYPGPPGPPGLQGPEGLRGMKGDTFSFPIAQDVKGAAGPPGL
YGEKGLNGDPGEPGLQGSPGPAGLPGSPGLPGLPGEKGQEGPSPVIPGPRGQKGIQGPPG
IPGQKGIKLYAEGSKELKGEPGETGEKGCPGLPGLPGKPGIKGEKGGRGDPGSLGKPGKE
GFPGELGEQGDPGDRGFLGPPGIDGSPGEKGDQGPPGLPGEMVWKHRFLKGQLGVPGPGG
PPGVPGEQGLIGFPGLQGEPGVGLPGPPGPQGPPGFSGPRGDSGDPGPLVVGPPGQTGVP
GFDGAEGEPGEPGIPNFVEGEVGPTGAKGLKGLMGFPGTRGEEGPTGEKGEVCLTCPLVS
GEPGPPGDPGAPGENGLTGSDGYPGFKGQKGVKGIGGPTGLSGAFGIPGLPGSPGPAGEP
GIMQRVGQKGEDGASGEPGPQGLDGLDGRPGVPGPKGVLGPKGDPGPLGPKGDQGPLGDT
GPRGLTGQMGPSGPPGIGAPGLPGPRGNVGILGEPGEPGAPGEKGSPGEIRTSPGDPGQK
GDTGLSGNPGPEGVTGPPGPSGFIGPKGEKGDKGFSVQGPPGFPGVKGPKGLPGAPGLPS
FGIKGRAGPSGPPGMPGPKGHRGFGFPGQQGQTGPQGEDGSVGPQGNPGPPGIDGVPGLP
GQDGLPGLKGHRGLDGVTGPAGFIGTCVPGDPGPEGEPGVRGVIGFPGIRGLKGEPGYPG
LPGVGALGPQGPYGNPGFDGAPGPVGGVGPKGLRGTDGEPGSPGVRGDQGPPGPFGSPGA
DGNPGESGQPGPKGLMGVNGFRGSQGPTGLQGDRGVPGPKGTQTDVMMPGDPGDPGFPGA
KGLTGPKGERGLAGLRGRDGSDGKPGNAGPRGLPGHPGRDGARGPPGPAGLPGNPGPMGM
PGCKGEKGCFGPCGIPGSKGKPGPEGPKGPKGEPSPPGPGSKGCPGMKGSPGCPGIPGTK
GHPGHCGDLGPPGKCGPCGPKGPSGPPGCRGPPGTPGDKGCDGPPGKSGPPGPTGLTGNK
GAPGDPGPAGPRGNQGQDGIPGPPGEKGAMGAPGTGPRGPEGKKGQPGCSGEKGPPGPCG
PPGPCGLPGNPGCSGPPGPPGPAGCPGKDGVCIKGTKGDRGVPGGRGTKGPPGSFGPPGP
PGPGCKGDKGCQGPKGNPGPPGCVGDPGHRGCVGRDGIPGPPGQKGLRGPLGTKGPSGLK
GDEGPPGPCGPRGSPGPPGRTGPRGRDVTRKVELCPGEKGSPGDPGPPGRRGPPGGAGAP
GPKGSRGFDGKTGRKGQRGRPGLKGDKGDRGFPGPIGREGFRGPTGAKGLPGQPGSCETP
TRKTGFLFTKHSQELYIPQCPEGSSLLYSGYSLLFINGNNRAHGQDLGTLGSCLPRFSTM
PFLFCSTDETCRYASRNDYSYWLSTNDQLPADLPFISEESLRNHISRCSVCEARANVIAI
HSQTRFIPDCPSGWDSLWSGFSFVMETGVGAEGSGQPLASPGSCLENFRKIPFIECHGRG
TCNYYTDSYSYWLAALNPADMFSKPRPQTDRGNLPGDLISHCRVCMKLL
NT seq 5010 nt   +upstreamnt  +downstreamnt
atggagcctccgggcggctgcaggagcagctttgtgccgctaccgctgctggttctcctg
ctgtggggctccacagctccgggacacgccgaaagggtttgtcactgcagcggaaagtct
ctctgccactgtgacggcatcaaaggccaaaagggggaacctggttacctcagatacgcg
ggacttcctggtgtgattggttaccctggaaacgagggtaatccaggtccagctggagaa
aagggtgatcggggagcagccggaggttcaggactgaaaggttctcggggtattccagga
aaaccaggtttcccaggacctccaggactgccgggaattcccggacatgaaggaccaatc
ggccgaccgggagtcccaggatgcaacgggacaaagggtgacgttggtttcccagggtac
cccgggcctccaggaccacctggcctgcagggccctgaaggactacgagggatgaagggc
gacacgttcagtttccccatcgctcaggacgttaaaggagcagcaggacccccgggactg
tacggagaaaaggggctgaatggagatccaggagaaccgggtctccaaggatcaccggga
ccggccggacttcctggaagcccagggttgccggggttaccaggagagaagggtcaggaa
ggtcccagtccggtgattccaggtccacggggtcagaagggcattcaaggacctcctggg
attcccggccagaaaggaatcaaactttatgccgagggatccaaagaactgaagggagaa
ccgggagaaaccggagaaaaaggctgtccaggacttcctggtttgccgggtaaaccgggg
attaaaggggagaaggggggcagaggagatccaggttcactgggtaaaccaggaaaagag
ggattccctggagagctcggagaacagggagaccccggagatcgtgggttcctcggtcct
ccgggtatcgatgggtccccgggtgagaaaggtgatcaaggtcctccaggtcttccagga
gagatggtttggaaacacagattcctgaagggccagcttggtgttcctggacccggagga
cccccgggagtccctggagagcaaggactcatcgggtttcctggactgcagggcgaacca
ggtgtgggtcttcctggtccaccaggcccccaggggcctcctggtttttctggccccaga
ggagattcaggagacccggggccattggttgtcggccccccaggacagactggagtccca
ggatttgatggagctgaaggagaaccaggagaaccaggaatacccaattttgtggagggt
gaagttggtccaacaggagctaaaggtctgaaaggcctgatgggatttcctggaaccaga
ggggaggagggaccaacgggtgagaagggggaggtgtgtttgacctgtcctctggtttct
ggagaacccggacctccaggtgatccaggagcaccaggtgaaaacgggttgacaggatca
gatggttatccaggatttaaaggccagaaaggagtcaaaggtattggaggtccaactggt
ctgtcgggtgcctttggtatccccggcctcccaggatccccaggaccagctggtgagcct
ggtataatgcaacgggtcgggcagaagggtgaggacggagcttcgggggaaccaggacca
caaggactggacgggctagatggacgtccaggagtaccaggaccaaagggtgttcttgga
ccgaaaggagacccggggcctctggggcccaaaggggaccagggtccactgggagacact
ggcccccgaggactgacgggacagatggggccctcgggacctcctggtatcggggctcca
ggactccctggacctagaggcaacgtgggaatcctgggagaaccaggagaacctggagcc
ccaggtgaaaaaggttctccaggggaaatcagaacctctccaggtgatccaggccagaaa
ggagacactggtttatctggaaaccccggacctgaaggtgtgaccggacctccaggacct
tcaggatttattggtccaaagggagaaaaaggagataaagggttttctgtccagggccct
ccaggcttcccgggagtcaaaggaccaaagggtctgcctggagctccgggtttaccaagt
tttggcatcaagggtcgagcaggaccatcaggtccaccagggatgcctggaccaaagggg
catagaggattcggtttcccaggccagcagggtcagactggccctcagggtgaagacggc
tcggtgggaccacaaggaaacccaggacctccaggaatagacggagtaccaggactgcca
ggacaagatggtctgccaggacttaaaggtcatcgcggtctggatggggttactggtcct
gctggtttcattggaacctgtgtacctggagatcctggacctgaaggagaaccaggcgtg
aggggcgtcatcggattcccagggatccgaggcctaaagggtgagcccgggtaccctgga
ctgccgggcgttggggctctgggccctcaggggccatacgggaacccagggtttgatgga
gctccagggccagtaggaggtgtgggaccgaagggtctgagagggaccgatggggagcca
ggaagcccaggagtcagaggggaccaaggccccccaggtccatttgggagtccaggggct
gatgggaacccaggggagtccggacaaccaggaccgaaaggtctcatgggggtcaatggg
ttcagaggttctcaggggccgactggcctgcagggggaccgaggagtacccggaccgaaa
ggaacccagacagatgtcatgatgcccggagatcctggagacccgggattccctggtgct
aaaggtctcactggtcctaaaggagagaggggccttgcggggctccggggccgcgacggc
agcgatggtaaacctggaaacgccggaccacgaggacttcctggacaccccggtagagat
ggagcgagaggtcctcctggtcccgctggactccccggcaaccctggaccaatggggatg
ccaggctgtaaaggtgaaaaaggctgtttcggaccttgtgggattcctggttcaaaaggt
aaaccaggaccagaggggcctaaaggtcctaaaggagaaccgagcccacctggaccagga
tctaagggatgtccaggaatgaagggtagcccaggttgtccaggaattccgggtacaaag
ggacatccaggacactgtggagacctcggtcctccaggaaagtgtggcccctgtggcccc
aaaggaccctctggacccccaggatgcagaggacctccggggactcctggtgataaaggt
tgtgatggtcctccaggtaaaagcggacctccaggacccaccggccttacaggcaacaag
ggcgctcctggagatcctggtccagctggtcccagaggaaaccagggacaggacgggata
cctggacctcctggagagaaaggagctatgggagctcctggaactggacctcgaggacca
gaagggaagaaaggtcaaccagggtgttctggagaaaagggtccccctggtccctgtggg
cctccgggtccatgtggtctcccagggaacccaggatgctccgggcctcctggacctcct
ggtcctgctggatgtcccggcaaagacggggtctgcatcaaaggaaccaaaggagacaga
ggagttcctggagggagaggaaccaaaggtcctcctggtagttttggtcctcctggtcct
cctggtccaggctgtaaaggagataaaggatgtcaaggaccaaaaggtaacccaggacca
cctggttgcgtcggagaccccggacaccgaggctgtgtgggcagagatggaataccgggt
ccacctggacagaaaggcctgagaggaccgctcggtaccaaaggaccttctggtctgaag
ggggacgagggacctccgggaccctgcggccctcggggatccccgggaccacctggaagg
acaggaccgcgagggagggacgtgacccggaaggtggagctgtgtccaggagagaaaggc
tcacctggagatccgggaccgccaggacgaagaggaccaccagggggcgcaggggcacct
ggacctaaaggttctcgaggcttcgatggtaaaactggtagaaaaggacaacgaggtcga
cctggactgaaaggagataaaggagaccgaggattccccggaccgattggtcgggaaggt
tttcgtggtccaaccggagctaaaggacttcctggtcagccaggcagctgcgagacgcca
accaggaagaccggcttcctgttcaccaaacacagccaggaactgtacatcccacaatgc
cccgaaggatcgtcgctcctatacagcggctactcgctgctgttcatcaacgggaacaac
cgagctcatggccaggacctcggtacgttgggcagctgcctccctcggttcagcactatg
cccttcctgttctgcagcaccgatgaaacctgccgctacgcctcccgcaacgactactcc
tattggctgtccaccaacgaccagctgcccgctgacctgccattcatctccgaagagtcg
ctgaggaaccacatcagccggtgttctgtttgtgaagccagagccaacgtgatcgctatc
cacagtcagaccagatttatcccagactgtccctctggatgggactcgctctggtctgga
ttctccttcgtcatggaaaccggagtcggggctgaaggttcaggtcaaccgctggcatcg
cccggatcctgtctggaaaacttccggaagattcccttcatcgagtgtcatggcagagga
acctgcaactactacaccgactcctacagctactggctggcggccctcaaccccgccgac
atgttcagcaaaccgaggcctcagactgaccgaggaaaccttccaggagacctgatcagc
cactgtagagtctgcatgaagctgctgtaa

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