KEGG   Amphiprion ocellaris (clown anemonefish): 111571027
Entry
111571027         CDS       T06018                                 
Symbol
ncbp2
Name
(RefSeq) nuclear cap-binding protein subunit 2
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
aoce  Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03013  Nucleocytoplasmic transport
aoce03015  mRNA surveillance pathway
aoce03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aoce00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111571027 (ncbp2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    111571027 (ncbp2)
   03015 mRNA surveillance pathway
    111571027 (ncbp2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aoce03019]
    111571027 (ncbp2)
   03041 Spliceosome [BR:aoce03041]
    111571027 (ncbp2)
Messenger RNA biogenesis [BR:aoce03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     111571027 (ncbp2)
Spliceosome [BR:aoce03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    111571027 (ncbp2)
SSDB
Motif
Pfam: RRM_1 RRM_occluded
Other DBs
NCBI-GeneID: 111571027
NCBI-ProteinID: XP_054870712
Ensembl: ENSAOCG00000002198
LinkDB
Position
2:complement(18043151..18048795)
AA seq 164 aa
MSAKLNALNSDSYIDVSQYRDQHFKGNRYEQEKLLKQSNTLYVGNLSFYTTEEQVHELFS
KSGDVKRIIIGLDKVKKTACGFCFVEYYTRADAEHAMRFINGTRLDDRIIRTDWDAGFKE
GRQYGRGKSGGQVRDEYRQDYDPARGGYGKLAQQHRPTEARNSF
NT seq 495 nt   +upstreamnt  +downstreamnt
atgtctgcgaaattaaacgcgttgaatagtgattcttacattgacgttagtcaatacaga
gaccaacattttaagggtaaccgctatgaacaggagaagctgctgaagcagagcaacaca
ttgtatgtggggaacctctccttctacaccactgaggagcaggtgcacgagctgttttct
aaaagtggagacgtcaagcgcatcatcatcggcctggataaagtcaagaagactgcctgt
ggattctgctttgtagaatactacacacgagcagatgcagaacatgcgatgcgatttatt
aatggcacacggctggacgaccgtatcatcaggacagactgggatgccggcttcaaagag
ggacgacagtacggccgtggcaaatctggaggacaggtgagggatgagtacaggcaggac
tacgacccggccagaggcggctacggtaagctggctcagcagcatcgacccacagaggca
cgcaatagtttttag

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