Amphiprion ocellaris (clown anemonefish): 111571139
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Entry
111571139 CDS
T06018
Name
(RefSeq) elongator complex protein 1-like isoform X1
KO
K11373
elongator complex protein 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aoce03016
]
111571139
Transfer RNA biogenesis [BR:
aoce03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
111571139
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
Beta-prop_WDR19_1st
Beta-prop_EML_2
B-prop_COPA_B_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
111571139
NCBI-ProteinID:
XP_054872357
Ensembl:
ENSAOCG00000000466
LinkDB
All DBs
Position
13:5262298..5279190
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AA seq
1313 aa
AA seq
DB search
MRNLKLLKSLRRSELQGPGSPQCFYVRADTGSLLIASQYSITEYDPRTGQVVSEASLTAD
SFLPEDGSGVVVGLQDLAELESACLATASGDVVLFNLNTCQLECVGSVDSGLTSMSWSPD
EELVILTTGQETIIMMTKDFEPITEVGIHQDDFGEGKFITVGWGKKETQFHGSEGKQAAQ
KKIQEVQPTVAWDDRRPRVTWRGDGQLFAVSAICPQTGARKVRVWNREGVLQATSEPING
LEQALCWKPSGSLIASTQRHPNKHSVVFMEKNGLLHGDFTLPFSKDQAKVKELLWNSDST
VLAVWLEDMAAGEDGQVNSHIQLWTVGNYHWYLKQSLDFGRDPQKAPVCVCWDPERPLQL
HVVSRSWTSITYDWGWMTERSPGLDATDNANVAVIDGEKILVTSFRQCVVPPPMSSFELQ
LTSPVNQVTFLCRPQGTNQVAAFTANGQISIYSQDSGERADKTADGFRTMSHPLVLQKTF
RLAALLDDPLALRQLLWLEDELFVGVSSGLLPTSSTLQMLRPVQDATDTLGVRAAVEVDG
VVVSVVHCSQTGTVALQLEDGQIRKLVWDCPEPSVEDWRDSSGCRINFPVPCIQTALCSI
SGEECLLGLTDRSHLYAGDTELASNVCSFAVCNDFLLITTHSHTCRCLHLGTLTVKGLQA
ALASDGSQNDETLRRVERGSRIVTVVPQDTRVILQMPRGNLETVHHRALVLAQLRTWLDS
LRFRDAFECMRRLRINLNLIYDHSPKVFLEKIQTFITQLNSINQINLFLTELKEEDTTSS
MYPRPESSSIQHQPSSGQKKVDVVCDALRNAMESMDPNKFCLSILTAHVKKTVPELEIAL
QKVHELRENPPEAPGAVSAEEALKYLLFLVNVNDLYEHSLGTYDFDLVLMVAEKSQKDPK
EYLPFLNMLKSLEPNYQRYTIDKHLKRYKKALLHLSKCGEEHFGEALQLVKEQKLYSEAL
KLYATDSVHYKALNCAYAEHLVEHQQAEQAGLLLWRCGEPVRALQAFAGSSSWRNAICVA
QQIPLPPDQLALLARDLAEKLTEQRRYADAALLLDQYAKDCEEAILALITGAVWEEALRL
IYMHNRQDITETNLKPALIEAVNTQTVFLEAQVATFTRHRTRLAVVREQKEKAKLDMLDE
DGPDCPDAELYSEASSVMTGSKYSQSNSRISSRSSKNRRKAERKKLSLKEGSPMEDRALM
YALGEMITSVDKMREEVHNLLKALVLFQFDKQAAKLQLSYEEALQMMEAAVPEVWPESLQ
NSQALLTGPNSTANSIMASYQQQQRPAASQQDAEVPTPPKMRNGIKWKLTVLK
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatctgaagctgctgaagagcctgcggaggtccgagcttcagggtccaggctct
ccacagtgtttctatgtgcgggccgacactggttcgctgctgattgcctctcagtactcc
atcacagagtatgaccctcgaactggtcaggttgtcagtgaagcctcgctgacagcagac
agtttcctcccagaggatggcagcggagtggtggtcggactgcaggacctggctgaactt
gagtctgcgtgtttggccacggcaagcggggatgtcgttctcttcaacctcaacacctgc
cagttggagtgtgttggcagtgtcgatagtggccttacctcgatgagctggagtcctgat
gaggagcttgtcatcctcactactggtcaggaaacaatcatcatgatgaccaaagacttt
gagccgatcactgaggtcggaatccaccaggatgatttcggtgaaggaaagttcatcaca
gtcggctggggaaagaaggagactcagttccatggctcagaggggaaacaagcagcacag
aagaagatccaggaggtgcagcccactgtggcctgggatgaccgcaggcctcgggtgacg
tggcgaggtgatggtcagctttttgccgtcagtgcgatctgtcctcagactggagccagg
aaggtccgggtctggaacagagagggtgtcctgcaggccaccagtgagcccatcaacggt
ctggagcaggcgctctgctggaaaccgtcgggtagcctgatagcgagcacccagcgtcat
cccaacaaacacagtgtggtgtttatggagaagaacggactgctgcacggagacttcact
ttgcctttcagtaaagaccaagccaaggtgaaggagctgctgtggaacagtgactccact
gttttagctgtttggttggaggacatggctgctggggaggatggacaggtcaacagtcac
atccagctgtggacggtggggaactatcactggtatctgaagcagagcctggactttggc
agagaccctcagaaggctccagtttgtgtctgctgggacccagagcgccccctacagctc
catgtggtgtcccgcagctggaccagcatcacctacgactggggctggatgacagagcgc
agccccggactggacgccaccgacaacgccaatgtggctgtgattgatggagagaaaatc
ctggtgacttctttcaggcagtgtgtggttcctcctccaatgagttcattcgagctccag
ttaacttcaccagtgaaccaggtgactttcctgtgtcgacctcaagggaccaatcaggtg
gcagcattcaccgctaatgggcagatctcaatctacagccaagattcaggagaacgggct
gacaaaacggcagatgggttcaggactatgtctcatcctctggtccttcagaaaaccttc
agactggcagcccttcttgatgatcctctggccctgaggcagctgctgtggctagaggat
gagctgttcgtgggggtcagttctggtctgctgccaacctcctccaccctgcagatgctt
cgtcctgttcaggatgctactgacacactcggagtgagggctgctgtggaagtggatggt
gttgtggtcagtgtggttcactgctcacagactggaactgtggccctgcagctggaggat
ggacagatccggaaactggtctgggattgtcctgagccatccgtggaggattggcgagac
tccagcggttgtcgcatcaactttcctgttccctgcatccagacggcgctctgcagtatc
agcggagaggaatgtctacttgggctgacggacagatcccacctgtacgctggagacaca
gagctggcctccaatgtctgctccttcgctgtttgcaacgacttcctcctcatcaccaca
cactcccacacctgccgctgcctccatctgggcacgctcactgtcaaagggctgcaggcg
gccttagcctcagatggaagtcagaatgatgagacgcttcggagagtggagagaggatcc
aggatcgtcaccgtagtgcctcaagacaccagagtgattctgcagatgcctcgtgggaat
ctggagactgtacatcacagagcgctggtgttggctcagctcaggacatggttggatagt
ttgagattcagagacgctttcgagtgtatgaggaggctgagaatcaacctaaacctcatc
tatgatcacagcccaaaggttttcttggagaaaatacagactttcatcacgcaactcaac
tccatcaaccaaatcaacctcttcctcactgagctgaaggaggaggacacgactagcagt
atgtacccccgtcctgagagcagctccatccagcaccaaccttcatctgggcagaagaag
gtggacgtggtttgtgatgctttacggaacgcaatggaatcaatggatccaaacaagttc
tgtctgtctattctgacggctcatgtgaagaagacagttccagagctggagattgctctg
cagaaagtccacgagcttcgagagaaccctcctgaagctccaggtgctgtgagcgctgaa
gaggcattaaagtacctcctgtttctcgtcaacgttaacgacctgtacgaacactcactg
ggaacgtacgacttcgacctcgtactcatggtggccgagaaatcccagaaggaccccaaa
gaataccttcccttcttaaacatgctcaagagcctggagccaaactaccaacgctacacc
atcgacaaacacctgaagcgctacaagaaggccttgcttcacctcagcaagtgtggagaa
gaacatttcggtgaagctctgcagctggtgaaggagcagaaactctacagtgaagctcta
aaactgtacgcaacagatagcgttcactacaaggctctgaactgtgcatatgctgagcac
ctggtggagcaccaacaggcggagcaggccggcttgttgctatggcgatgtggagagccg
gtccgcgccctgcaggctttcgccggcagctccagctggagaaacgccatctgtgtggcg
cagcagataccgctgccaccggaccagttggctctgctggccagagacctggcagagaag
ctgactgaacagaggcgctatgcagatgctgctctgctgttggaccagtacgctaaagac
tgtgaggaagccatcttggctctgatcactggtgcagtctgggaggaggcgctgcgactg
atttacatgcacaacaggcaagacatcaccgaaaccaacctgaaacctgcactaatagaa
gctgtcaatacccagactgtcttcctggaggctcaggtagcgacgttcacacggcacagg
acccggctggccgtggtccgtgagcagaaagaaaaggccaaactggacatgctggatgaa
gatggtccagactgtcctgatgctgaactttactctgaagccagcagtgtgatgaccggt
tccaaatactcccagagtaactcccgtatctcctcgagatcatcaaagaaccggcggaaa
gccgagcgaaagaagctgagtctgaaggaaggaagcccgatggaggaccgagcacttatg
tatgccctgggagagatgatcacctctgtggacaagatgagagaggaagtccacaacctg
ctgaaggccttggtgctgttccagtttgacaaacaggcagcaaagttgcagctttcctat
gaagaagctctgcagatgatggaggcagcggttcctgaggtgtggcctgaaagcctgcag
aacagccaagccctgctcactgggccaaactctaccgcgaacagcatcatggcttcttac
caacagcagcagagacctgcagcttcacaacaagatgcagaggttccgacaccaccaaag
atgagaaacggcatcaagtggaagcttactgttcttaaataa
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