Amphiprion ocellaris (clown anemonefish): 111571204
Help
Entry
111571204 CDS
T06018
Symbol
neo1a
Name
(RefSeq) neogenin 1a isoform X1
KO
K06766
neogenin
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04350
TGF-beta signaling pathway
aoce04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111571204 (neo1a)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111571204 (neo1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aoce04515
]
111571204 (neo1a)
Cell adhesion molecules [BR:
aoce04515
]
Immunoglobulin superfamily
DCC/UNC5 family
111571204 (neo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
fn3_2
Tissue_fac
Ig_5
Sp38
V-set_CD47
PRIMA1
EphA2_TM
DUF4834
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
111571204
NCBI-ProteinID:
XP_054867866
Ensembl:
ENSAOCG00000000817
LinkDB
All DBs
Position
1:complement(652191..894445)
Genome browser
AA seq
1505 aa
AA seq
DB search
MAERGALWLLSLLWLTFLSTETSAAKHVDKGSAAHPFSPFWLTVEPQDTLAIRGNSALLN
CSAHSDAATPARIEWKKDGTFMSLVSDERRNILPDGSLLFTHVVHSKHNKPDEGTYQCVA
TIDNLGSISSRTARLSVAGMPRFVSQPSAASVRLGDSQVMACEVNSDLVPFTRWEKDRQP
LELSSRLVQLPSGALVISNASEADAGSYRCLVENVGSSKSSDEAQLQTLPETGEDRKLEL
LVQPSPVAKVTGSSVLLPCVVAGFPAPHIHWMFGDKLLDESEGRVEMLGGGSLQIYNLTE
EDTGIYTCVAENSNSSIEAQAQLTIQVPPQFVKRPANIYAHESMDIVFECEVSGSPAPTV
KWVKNGDAVIPSDYFKIIKEHNLQVLGLVKSDEGFYQCLAENDAGNIQSSAQLIILDHDV
ALPSFPPPSLTPNTTDHVTPGSGGVAGPAGPTPSAPRDVVASLVSTRFIKLTWRQPAEPH
GDELTYSVFYSQEGNSRERVVNTSRPGEMQVTIQNLMPDSKYRFRVVAHNSNGPGESSAA
LRVATQAEVQVPGPAPNLQAVSNTPTSMSLSWDKPLTGNGEILTYKLYYTDKSVGTEQDV
DIDGQSYTLTGLKKNTEYSFRVVANNKHGPGVSTEDVTVRTLSDVPSAPPQNLTLEVQNS
RSIMLRWQPPPLSGQNGEITGYKIRYRKGSRRSETADTIGGTQLYKLIDGLERGTEYSFR
VSAMTVNGTGPATEWITVETFESDLDESRVPDQPSSLHVRPLVNSIVVSWTPPENQDIVV
RGYSIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPVYESAITR
PQSDPMDPDVDLYELFHAPYTPVPDPTPMMPPVGVQASVLSHDTIKVTWADSSLPKSQKI
TDNRYYTVRWKTNIPANTKVKMANTTSLNHMVTALKPNTLYEFSVMVTKGRRTSTWSMTA
QGTTFETIPSSSPKDVTVVSKENKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEVHDW
VIEPVVGNRLTHQIQELTLDTTYYFKIQARNSKGMGPMSEAVHFRTPKTESSDKMANDQA
SNPPPKPGPPGNHNPVDTGTSVGKSGVGGSESHILVIVIIISVGAFTIIVVVVGAFLCTR
RTTSHQKKKRAASKSSNGSHKYKGNSKDLKPPDLWIHHERLELKPMDKSPEPNPVMTETP
IPRTSQDITPADSGLESNPHLQQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDAQPPQ
PVISAHPIHSLDNHHHHYHMGSLASPTRSYLYHQGHPRPHACASPISHLDRVDSSESVRN
TPSSEPLPPATASSQASCPSEILADPEGSYHGSTTAEEEPSYSSNLPPHRSAHPHAHPLK
SFAVPVIPASSHPSYESPALPSTPLLAQTGPPTHPHVVKTASIGTLGRTRTPMAVTVPNA
PDVPETSKMLEDVDNVLASLAPCPSPAPRSNPVPLPQSYEPDELTEEMAHLEGLMKDLNA
ITTAP
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcggggagctctgtggctcctctctctcctctggctcacctttctctccacg
gagaccagcgccgcgaagcatgtcgacaaaggttcagcagctcaccccttcagccccttc
tggttaacggtggagccccaggacacgctggccatccggggaaactcggctctgctcaac
tgctcggcacacagcgacgccgccacgccggctcgcatcgagtggaagaaagacggcacg
ttcatgagcctggtgtcggacgagaggcggaacatcctccccgacgggtcgcttctcttc
acccacgtggtccactccaagcacaacaagcctgacgagggaacctaccagtgcgtcgcc
accatcgacaacctgggatccatctccagccgcacggcgcgactctcagtagcaggaatg
ccccggttcgtcagccagccgtcggccgcctcggtgcgtctcggggacagtcaggtgatg
gcctgtgaggtgaactcggatctggtgccgttcacccgctgggaaaaagaccgccagccg
ctggaactgagctccagactggtgcagctgcccagtggagctctggtcatcagcaacgcc
tcggaggccgacgccggctcctaccgctgcctggtggaaaacgtcggctcctccaagtcc
agtgacgaggcccagctccagacactgccagaaactggagaagacaggaagctggagctc
ctggtgcagccatcaccggtggccaaagtgacgggctccagcgttctgctgccatgcgtc
gtcgcaggtttccctgcgccacacattcattggatgtttggagacaagctgctggatgaa
agcgagggtcgtgtggaaatgctgggtggaggaagtctccagatctacaacctgacggag
gaggataccggcatctacacctgcgtggccgaaaactccaacagcagcatcgaagctcag
gcccagctcacaatacaagttcctccgcagtttgtcaagcgaccagccaacatttacgcc
catgagtccatggacatcgtgtttgaatgcgaggtgtccgggtcgcctgctcccaccgtt
aaatgggtgaagaacggagacgctgtcatccccagcgactacttcaaaataatcaaggag
cacaacctgcaggtcctgggtctggtcaagtcagacgagggtttctaccagtgcctggcg
gaaaacgacgcaggaaacatccagtccagcgcacagctcatcatcctggatcacgacgta
gccctgccctccttccctcccccctcactgactcctaacactactgaccatgtaacgcca
ggctccggaggtgtagccggcccagcaggtcccaccccctccgcccccagagacgtcgtg
gcttcgctggtctccacccgattcatcaaactcacctggagacagccagctgaaccgcac
ggggacgagctcacctactccgttttctacagccaggagggcaacagcagggagcgagtg
gtgaacaccagccgtccaggggagatgcaggtcaccatccagaacctgatgccagactcc
aaataccgcttcagggtggtggcccacaacagcaacgggccgggagagagttctgcagcg
ctcagagtggccacccaggctgaagtccaagtccccggtccggctcccaacctgcaggcg
gtgtccaacacgcctacctccatgtccctgagctgggacaaaccgctcaccggcaatgga
gaaatcctcacctacaagctgtactacacggacaagagcgtcggcaccgaacaggacgtg
gacatcgacggtcagtcctacaccctgacggggctgaagaagaacaccgagtacagcttc
agggtggtggccaacaacaagcacggtccaggagtttccactgaagacgtcactgttcgc
acgctgtctgatgtaccgagcgctcctcctcagaacctgaccctggaggtccagaactca
cggagcatcatgcttcggtggcagcctccacccctgagcggccagaacggggagatcacc
ggctacaagatccgctaccggaaaggatccaggaggagcgagacggccgacaccatcgga
ggaacccagctgtacaaactcatcgatggtctggagagaggaaccgagtattctttccgg
gtgtcggctatgacggtgaacggaaccggaccggcgactgagtggatcacagtggagacg
tttgagagcgacctggacgaatcccgtgtgccggaccagcccagctccctgcacgtccgg
ccgctggtcaacagcatcgtggtgagctggacgccgcccgagaaccaggacatcgtggtc
cgaggttactccatcggctacggcatcggcagcccccacgcccagaccatcaaagtggac
tacaagcagcgctactacaccatcgagaacctcgacccgagttcgcactacgtcatcact
ctgaaggccttcaacaacgtgggcgaagggattcctgtgtacgagagcgccatcaccagg
ccgcagtcggaccccatggaccccgatgttgacctgtacgaactcttccatgctccatac
accccagtaccagaccccacccccatgatgcctcccgtgggcgttcaggcctcggtgctg
agccacgacaccatcaaggtgacctgggccgacagctcgctgcccaagagccagaagatc
acagataaccgctactacacggtgcgatggaagaccaacatcccggccaacaccaaagtt
aagatggccaacaccaccagcctgaaccacatggtgacggctctgaagcccaacacgctc
tacgagttctccgtcatggtgaccaaaggccggaggaccagcacctggagcatgacggcg
cagggcaccacctttgagaccatccccagctcctcgccgaaagacgtgaccgtggtgagc
aaagagaacaaacctcgcaccatcatcgtcaactggcagcctccatccgaagccaacgga
aagatcactggctacatcatctactacagcaccgatgtgaacgccgaggtccacgactgg
gtcattgagccggtggtggggaaccggctgacgcaccagatccaggagctgacgctggac
accacctactacttcaagatccaggcccggaactccaaggggatgggccccatgtctgag
gccgtgcacttccgcacccctaagactgagtcctctgacaaaatggctaatgaccaagct
tcaaatcctccaccgaagccgggacctccaggaaaccacaacccagtggacaccgggacc
tcagtgggtaaatcaggggtcggcggcagtgagagccacatcctggtgatcgtcatcatc
atctcggtgggagccttcaccatcatcgtggtggtggtcggagccttcctctgcacccgg
agaaccacgtcccaccagaagaagaagcgagctgcctccaagtcctccaacggctcccac
aagtacaaggggaactccaaagacctgaagcctcccgacctgtggatccaccacgagagg
ctggagctgaagcccatggacaagtccccggagcccaacccggtcatgaccgagacgccc
atccctcgcacgtcgcaggacatcacgccggccgacagcggcctggagagcaaccctcac
ctgcagcagagacgcaactcctaccgcggccacgaatcagaggacagcatgtctacacta
gcaggccgccgagggatgaggcctaaaatgatgatgccttttgacgctcagccgcctcag
cctgtgattagtgctcaccccatccattccctcgataaccatcaccaccattatcacatg
ggcagcctggcgtcgccgacacgcagctacctctaccaccaggggcaccctcgccctcac
gcctgcgcctcccccatctcccatctagacagggtggactcctcagagtcggtgaggaac
acccccagctcggagcccctgcctccggccaccgcctcctcccaggcctcctgcccctcg
gagatcctggccgaccccgagggcagctaccacggctccaccaccgcggaggaggagccc
agctactccagcaacctgccgcctcaccgctcagcgcacccccacgcccacccgctcaag
agcttcgccgttcccgtcatcccggcctccagccatccgtcgtacgagtcccccgccctg
cccagcaccccgctgctcgctcagaccgggcctcccactcacccccacgtggtgaaaaca
gcttccattggaactctgggaaggacacgaacaccgatggccgtcaccgtgcccaatgcc
cccgacgtgccggagaccagcaagatgctagaagacgtggacaatgtgcttgcctccctc
gccccctgtccctcccccgccccccgcagtaaccctgttcctctcccccagagctacgag
cccgacgagctgaccgaggagatggcccacctggagggcctgatgaaggacctgaacgcc
atcaccacagcgccctga
DBGET
integrated database retrieval system
