Amphiprion ocellaris (clown anemonefish): 111571272
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Entry
111571272 CDS
T06018
Symbol
lingo1b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoce04131
]
111571272 (lingo1b)
Membrane trafficking [BR:
aoce04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
111571272 (lingo1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
LRR_Zer-1
Ig_2
LRR_9
LRR_RPS2
V-set
LRRNT
Ig_C17orf99
LRR_6
LRRCT
Motif
Other DBs
NCBI-GeneID:
111571272
NCBI-ProteinID:
XP_023130140
Ensembl:
ENSAOCG00000011126
UniProt:
A0A3Q1D035
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Position
1:complement(40622901..40646273)
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AA seq
623 aa
AA seq
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MTVLVSSRMVSGEAGGHSYLVACWQPILILMLGTVLSGSTTGCPSRCDCNGQERSVVCHR
RRLAALPEGIPTETKLLDLSKNRLKALGPEEFINYPQLEELQLNENTISSIEPGAFGNLM
NLRTLGLRSNQLKLIQLGVFTGLTNLTQLDISENKIVILLDYMFQELYNLRALEVGDNDL
VFISPRSFHGLSNLESLNIEGCNLAAVPTDALSHLHNLLSLRLRYLNVTVIRDYSFKRLY
RLRVLEISHMPALDTMTPKCLFGLNLTSLSITNCNLTVIPYQAISHLRHLRFLNLSFNPI
HTVEGNQLSNLQKLQAFHLTGGKLAAIEPYSFRGLNHLRVLNVSGNSLSTLEESVFHSVG
NLETLALYDNPLACDCRLLWVFRRRWRLNFNRQQPMCASPEVVQGKEFKDFPDILPPDSF
TCQKSKIVDYKVQESHVDEGTTVHFACQAEGNPIPAIMWLSPKKEYITTKTMGSRLSVSN
DGTLEVRYAQIQDNGTYLCIASNAAGNDTKAAHLFVHSYSPNWPHQPNKTFAFISNQPSD
EGANVTRATVPFPFDVKTLIIATTMGFISFLGVVLFCLVILFLWSRGKDNTKSSIEVEYV
PRKEEAEEASPTEAPVQFNMKIM
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcctggtaagcagtaggatggtgtccggggaggcaggggggcacagctacttg
gtggcgtgctggcagcccatcctgatcctgatgctcggcaccgtcctctccggatccacc
accggttgcccctccagatgcgactgcaacggccaggagcgttcggtcgtgtgccaccga
cggaggctggcggctctccccgagggcatccccaccgagacgaagctgctggacctcagc
aagaaccgtctgaaggccctggggcccgaggagttcattaactaccctcagctggaggag
ctgcagctcaacgaaaacacaatttcctccatcgagcccggggcgtttggcaacctcatg
aacctccggactcttggtctgcgcagcaaccagctgaagctcatccagctgggggtgttc
acgggcctcaccaacctcacccagctggatattagcgagaataaaatagtcatcctgctc
gactatatgttccaggagctgtacaacctgagggctttggaggttggcgacaacgacctg
gtgttcatctcgcccaggtcatttcatggtctcagcaacctcgagagcctcaacattgag
ggatgcaatctggccgctgtgcccactgatgcccttagccatctgcacaacctgttgtca
ctccgattacgctatctgaacgtcactgtcataagggattactcctttaagagactgtat
cggctccgagtgctggagatttctcatatgcctgccctggatacgatgaccccgaaatgc
ttgtttggactcaacctcacatctttgtccatcacaaactgtaatctcaccgtcatcccc
taccaagccatcagccacctaagacatcttcggttcctgaatctgtctttcaacccgatt
cacaccgtagaagggaaccaactgtctaatctccagaagctccaggcttttcatttgact
ggcgggaagctggccgccattgagccctactctttccgcggactcaaccacctccgagtg
ctcaacgtatctggcaacagcctgagcaccctggaggagtctgtcttccactcggtgggg
aacctggagaccctggcgttgtacgacaaccccctggcctgcgactgccgcctgctgtgg
gtgtttcgtcggcggtggaggctcaacttcaaccggcagcagcccatgtgcgcttcaccc
gaggtcgtgcaaggaaaagagttcaaggatttccccgacatcctccctccggactctttc
acctgccagaaatcgaagatcgtggattacaaggtgcaggaaagccacgtggacgaggga
actacggttcacttcgcttgccaggctgaaggcaatccgatcccggcgatcatgtggctt
tccccgaagaaggaatacatcaccaccaaaactatgggctcaagactttctgtgtctaat
gacggtaccttggaggtgcgttacgcccaaatccaagacaatggcacctacttgtgcatt
gcgagtaatgcagcaggaaacgacaccaaagctgctcacctgtttgtacatagctactcc
ccaaactggccccaccagccaaacaagacattcgccttcatttccaaccagccgagcgat
gaaggcgctaacgtgacccgggccacagttccgttcccattcgacgtaaagacactcatc
attgcgaccaccatgggatttatctctttcctcggagtggtcctgttctgtcttgtaata
ttgttcctctggagcagagggaaagacaacaccaagtcgagtatagaggttgaatatgtg
ccacgtaaagaggaggcggaggaggccagtccgaccgaggcaccggtgcaatttaacatg
aaaatcatgtga
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