Amphiprion ocellaris (clown anemonefish): 111571415
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Entry
111571415 CDS
T06018
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoce03041
]
111571415
Spliceosome [BR:
aoce03041
]
Common components
Common spliceosomal components
General mRNP proteins
111571415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
111571415
NCBI-ProteinID:
XP_023130310
Ensembl:
ENSAOCG00000007223
UniProt:
A0A3Q1ARI0
LinkDB
All DBs
Position
5:39800954..39816628
Genome browser
AA seq
506 aa
AA seq
DB search
MADDLDIEAMLEAPYRKEDTKASSSNGQEDRNKRKKHTCSHSRDRNRSRSRDKKRSHSRK
RSRERRRSRSRSREHRRSRERGGRYRDHHKSRRRSKSKSPFRKEKSPIRQPIDNLTPEER
DARTVFCMQLAARIRPRDLEEFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVEASSVPLA
IGLTGQRLLGVPIIVQASQAEKNRAAAAAAAAAAAAAANNLQKGTSGPMRLYVGSLHFNI
TEEMLRGIFEPFGRIESIQLMMDSETGRSKGYGFIMFADAECAKKALEQLNGFELAGRPM
KVGHVTERTDASTASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQM
SGAIAIGAMAAVSAAMNPSLNINMNSAALNLPAQPLATHCFQLSNMFNPHSEEAAGWEVD
IQHDVIEECSKHGGVVHIYVDKNSAEGNVYVKCPSIPAAMAAVNTLHGRYFAGKMITAAY
VPLPTYHNLFPESVTATQLLAPPPRQ
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgacctggacatcgaggcgatgctggaggctccctacaggaaggaggacacc
aaggcctccagctccaacggacaggaggaccgcaacaagaggaagaagcacacctgctct
cacagccgtgacaggaatcgcagtcggagtcgagacaagaagaggagtcacagccgcaaa
cgcagccgagaacgacgcaggagtcgcagccgcagtcgagaacaccgtcgcagccgagag
cgaggaggacgctaccgagaccaccacaagtcccgtaggaggtcaaagagtaagagtccg
ttcaggaaggagaagagtccaatcaggcagcccatagacaacctgactccagaggaacga
gacgcccgaaccgtgttctgtatgcagctggcagcccggatacggcctcgagacctggag
gagttcttctcagctgttggaaaggttcgggatgtgaggatgatctcagacagaaactct
cgcaggtcgaagggcatcgcctacattgagtttgtggaggccagctcagttcctctggcc
attggactaacggggcaaaggctgctgggagttcccatcatcgtacaggcatcacaggct
gagaagaaccgagcagcagcagcagcagcagcagcagcagcagcagcagcagctaacaac
cttcagaagggaacatctggaccgatgaggctctatgtcggctcgctgcacttcaacatc
accgaggagatgctaagaggaatctttgagccatttggacggattgagagcatccagctg
atgatggacagtgagacgggacgctctaaaggctacggcttcatcatgtttgcagatgca
gaatgcgctaagaaagctctggagcagctgaacggcttcgagctggcgggtcgccccatg
aaggtgggccacgtgacggagcggaccgacgcctccacagcatcatctttcctcgacagc
gacgagctggaacgcaccggcatcgacctgggaaccaccgggaggctgcagctgatggcc
cggctggctgaaggaactggacttcagattcctcctgctgctcagcaggctctgcagatg
agtggagctatcgctataggagccatggctgctgtgtcagctgccatgaatccgtccctc
aacattaacatgaactctgctgctctcaacctgccggctcagcctctggccactcactgc
ttccagctgtccaacatgttcaacccccacagtgaggaggcggctggttgggaagtggac
atccagcatgacgtcatcgaggagtgcagcaaacacggaggagtggtccacatctacgta
gacaagaactctgccgagggaaatgtttatgtcaaatgtccatcgatcccggccgccatg
gctgctgtcaacactctccatggaagatattttgcaggtaagatgatcacggcggcgtac
gtccccttgcctacctaccacaacctgttcccagagtccgtcactgccactcagctgctg
gctccgcctccacgccagtga
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