Amphiprion ocellaris (clown anemonefish): 111571421
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Entry
111571421 CDS
T06018
Symbol
polr2j
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03020
RNA polymerase
aoce03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111571421 (polr2j)
09124 Replication and repair
03420 Nucleotide excision repair
111571421 (polr2j)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoce03021
]
111571421 (polr2j)
03400 DNA repair and recombination proteins [BR:
aoce03400
]
111571421 (polr2j)
Transcription machinery [BR:
aoce03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
111571421 (polr2j)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
111571421 (polr2j)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
111571421
NCBI-ProteinID:
XP_023130319
Ensembl:
ENSAOCG00000006937
UniProt:
A0A3Q1C3H7
LinkDB
All DBs
Position
5:complement(39859967..39861536)
Genome browser
AA seq
117 aa
AA seq
DB search
MNAPPAFESFLLFEGEKKISISKDTKVPNACLFTLNKEDHTLGNIIRAQLLKDPQVLFAG
YKVPHPLEHKIVIRVQTTPDYSPQEAFTNSITDLISELSLLEERFRVAIKDKQEGIE
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgccccccgcctttgagtcgtttctgctgttcgaaggagagaaaaagatcagc
atcagcaaggacaccaaagtcccgaacgcctgtctgttcaccctgaacaaggaggaccac
acgctgggcaacatcatccgagctcagctgctgaaggatcctcaggttctgttcgctggt
tataaagttcctcatcctctggagcataagatcgtcatcagagtgcagacaacacctgac
tacagcccacaggaagcgttcaccaactccatcactgacctgatcagcgagctgtcgctg
ctggaggaacgtttccgagtcgccatcaaagacaagcaggaaggcatcgagtga
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