Amphiprion ocellaris (clown anemonefish): 111571483
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Entry
111571483 CDS
T06018
Symbol
lig3
Name
(RefSeq) DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111571483 (lig3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoce03400
]
111571483 (lig3)
Enzymes [BR:
aoce01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
111571483 (lig3)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
111571483 (lig3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
111571483
NCBI-ProteinID:
XP_023130434
Ensembl:
ENSAOCG00000024040
LinkDB
All DBs
Position
14:30282744..30317694
Genome browser
AA seq
1010 aa
AA seq
DB search
MQKTVFLLVHKTVSEGLQPLTTLVRCQQLLKVCRAFSVSSCSTHLLSLVHSLNFSGKTRD
FSLVSHKHSLLRSSPPWISLHWCFCTQPDMAEQRFLVEYAKRGTAGCKKCKDKIQKGIVR
IGKIVPNPFSESAGEMKEWYHVKCIFEKLERARATTKKIEDITDLEGWEELQDEDKELIN
KHVSDLMAKVNASPKKKVQAKMNTSGQLMAPPADPSVNAPRKFSGFTAAKAGSSSSPGPS
SSSSAKSSQGSALSTRLCDPQHKDCLFREFRKLCAMVAENSSYNVKTQVIEKFLKKGSVG
DKFQGDLYLTVKLLLPGVVKSVYNLNDKQIVKLFSRIFRCNQDDMVRDLEQGDVSETVRM
FFEDSKSFPPAAKSLLTIQEVDASLTRLAQLTKEDEQQTELEDISKKCTSNDLKCIIRLI
KHDLKMNAGAKHVLDAVDPNAYEAFKASRNLGDVIERVLRNQQEASNGSGPRKLLTVEAT
LMTPVQPMLAEACKSVEYAMKKCPNGMYSEIKYDGERVQVHKSGDIFNYFSRSLKPVLPH
KVAHFKNYIPQAFPGGHSMILDAEVLLIDTKTSKPLPFGTLGVHKKAAFQDANVCLFVFD
CIYFNGVSLMERPLSERRKFLHDNMVEVPNRILFSEMKHVTRAGDLAEMITRVIREGLEG
LVLKDIKGSYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGKGSNGGIMSSFLMGCY
DPDSKKWCTVTKCSGGYDDAMLARLQKELDVIKISKEPSKIPGWLKIIKNYYPDFIIRDP
EQAPVWEITGAEFSKSEMHTADGISIRFPRMTRIRDDKDWKSATNLHQLKELYRISKENC
DFKVTAGPSNDDKGSSGGDSGGNSPSSSSHRSAPAKKTNNSTPPKAKAVKSQPRTPASEA
PSAKKAKKSDSINGNGQTKTKATSQVLQPRNDKTLLDIFSGVKLFLPVSVQDFDKLRRYF
VAYDGDLVPDYDAASATHTLAEPDEDSQAQRVSPSWIWECIRKRRLVPPC
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaactgtttttctactagttcacaagactgtcagtgaaggtctccaacctctt
acaacacttgtcaggtgtcagcagcttttgaaggtgtgtagagccttttctgtttcttca
tgctctacacatctactgtcacttgttcattcgctaaatttttctgggaaaacccgtgat
ttttccttggtatcccataaacacagtctcctccgaagctctcctccctggatttccctg
cactggtgtttctgtacacagccagatatggcagaacagaggttcctcgtggaatatgcc
aagcgtggtactgcaggatgtaagaaatgcaaggacaaaatccagaaaggcatagtgcgc
ataggcaagattgtgccaaaccctttcagtgagtctgcaggggagatgaaagagtggtac
catgtgaagtgcatatttgagaagctggaaagggcaagagccaccacaaagaagatcgag
gacatcacagatctggagggctgggaggagctgcaggatgaagacaaggagctcatcaat
aaacacgtctcagacctgatggccaaagttaatgcgagtccaaagaagaaggtccaggcc
aagatgaacacctctggtcagctgatggctcctcctgccgacccgtccgtcaacgctcca
cgcaagttttcaggcttcaccgctgcgaaggctggtagctccagcagccccggaccgtcc
tcctcctcctcggccaaaagcagccaaggcagcgctctgtccactcggctctgtgaccct
cagcacaaagactgcctcttcagagagtttcgcaaactctgcgctatggtggctgaaaac
agcagctacaacgtgaagacacaggttattgagaagttcctgaagaagggttcggttgga
gataagttccagggggatctttacttgactgtgaagctgctcctgccgggcgtcgtaaaa
agcgtctacaacctcaatgacaagcagattgtgaaactcttcagccgcatattcagatgt
aaccaggacgacatggtgcgcgatctggagcagggtgacgtgtctgagacagtgaggatg
tttttcgaggacagtaaatcatttcctccagccgccaagagccttctgaccatccaagaa
gtagacgcatccctgacccgcctcgcccagctgacaaaggaggacgagcagcagacagag
ctggaggacatctccaaaaaatgcaccagtaatgacctgaaatgcatcattcgtctaatt
aagcacgacttgaagatgaatgccggcgcaaaacacgtcttggatgctgtggatccaaac
gcttatgaagccttcaaggcctcccgtaacctgggtgatgtgattgaaagagttttgagg
aatcagcaggaggcgtccaatggttccggacccagaaaactcctcactgtggaggccacg
cttatgacccccgtccagcccatgttggcagaggcgtgtaaatcagtcgagtacgccatg
aagaagtgccccaacgggatgtactcggagatcaagtacgatggagaacgcgtgcaggtc
cacaagagcggagacatcttcaactacttcagccgcagcctcaaaccggtgttgccacac
aaagtggcacatttcaagaactacatccctcaggcttttcctggcggccacagtatgatc
ctggatgctgaagtcctcctaattgacacaaagaccagtaaacccctgccctttgggacc
ctgggggtacacaagaaagcagcctttcaagatgccaacgtgtgcctgtttgttttcgac
tgtatctacttcaatggtgtgagtctcatggagaggcctctgagtgaacgcaggaagttc
ctccatgacaacatggttgaagtccccaacaggatcctgttctcagagatgaagcacgtc
actagggcaggagatctggctgagatgataactcgtgtcatcagggagggacttgaaggc
ctcgtgctaaaagacataaagggcagctacgagccgggaaaacgtcactggctgaaagtc
aagaaggactatctgaatgaaggagcgatggcggacacggctgacctggtggtgctgggg
gcattctacgggaaaggatcaaacgggggcatcatgtccagcttcctgatgggctgctac
gacccagactccaagaaatggtgcacagtcaccaagtgctccggaggctacgatgacgcc
atgttggccaggctccagaaagagctggatgtgatcaaaatcagcaaggagcccagcaag
atccccggctggttgaaaatcatcaagaactattatccagatttcattatccgcgatccc
gagcaagcacccgtctgggagatcacgggcgccgagttctccaagtcagaaatgcacacc
gctgatggcatctccatccgctttccccgcatgacgcgaatccgcgacgacaaggactgg
aagagcgccaccaacctgcaccagctcaaagagctgtaccgcatatcgaaggagaactgc
gactttaaagtcaccgccggtccgtccaacgacgacaagggctcttcagggggagacagc
ggaggaaactcgccgtcgtcctcgtcccacaggagtgctccagccaagaagacgaacaac
agcaccccacccaaagcgaaggcggtgaaatcccagccgcgtacccccgcctcagaagct
cccagtgcaaagaaggcgaagaagagcgatagcattaacggcaacggacaaaccaaaaca
aaagcaacctctcaggtgctgcagccaagaaacgacaagacgctgctggacatcttcagc
ggagtgaagctcttcctgcccgtctcggtgcaggactttgacaaactgaggcggtacttt
gtggcgtacgacggggacctcgttccggactacgacgccgcctcggccacgcacacgctg
gccgaacccgacgaggacagtcaggcccagagagtttcacccagctggatctgggaatgt
atccgcaagaggcgcctcgtacctccctgctaa
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