Amphiprion ocellaris (clown anemonefish): 111571529
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Entry
111571529 CDS
T06018
Symbol
robo1
Name
(RefSeq) roundabout homolog 1 isoform X3
KO
K06753
roundabout, axon guidance receptor 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
111571529 (robo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aoce04515
]
111571529 (robo1)
Cell adhesion molecules [BR:
aoce04515
]
Immunoglobulin superfamily
ROBO family
111571529 (robo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Unc5_NetrinR_N
Ig_PDGFR_d4
Motif
Other DBs
NCBI-GeneID:
111571529
NCBI-ProteinID:
XP_023130511
Ensembl:
ENSAOCG00000022573
LinkDB
All DBs
Position
7:27689723..27924315
Genome browser
AA seq
1692 aa
AA seq
DB search
MCGTWSGATPLFIMVLLRLAPGQEVPLVPETGVAQDGASEGATPAPTSEHEDDNSLGYTG
SRLRQEDTPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTVEWYKDGERVETDRDNPRSQ
RMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVSHNASLEVAILRDDFRQNPAD
VIVAAGEPAVLECQPPRGHPEPTISWKKDGTNIDDRDERITIRGGKLMITNARKTDAGKY
VCVGTNMVGERESEIAELTVLERPSFVRRPGSQVVLVDQSVEFRCEARGDPVPTVRWRKD
DGDLPKGRYEIREDHTLKIRRLASADVGSYTCVAENMVGKAEASATLTVHVVSVPPAFVV
RPRNQVVGVGRTVTLQCEATGNPQPAIFWQREGSQNLLFSYQPPQPSSRLSVSQTGDLTI
TDAERSDMGYYSCQALNIAGSVITKALLEVTDVVSDRPPPVIRQGPTNQTVAVDGTVILN
CVTSGNPTPTILWRKDGVLVSTHDSRVKQLDTGALQIRYAKLGDTGTYTCIASTPSGEAS
WKAYLEVQEFGAPVQPNRPTDPNLIPSAPSKPDVTDVSRTSITLSWKPNLNAGATPTSYI
IEAFSHASGSSWQTLAEHVKTESFVLKGLKPSAVYLFLVRAANAYGLSDPSPITDAVKTQ
DIPPTSQGVDHRQIQKELGDVVIHLHNPTILSSSSVRVQWTVEQQSQYIQGYKVMYRPSP
EGLQRSEWAVFEVRTPGEDSAVVPQLRKGVTYEFKVRPFFNEFQGTDSDVKIGKTLEEAP
SAPPRKVTVTESGDNGTAIVVSWQPPPEEEQNGVVQEYKIWCLGNESRYHINRTVDGSTL
SVLIPSLAPGIRYSVEVAASTGAGPGVKSDITFFQLDASGRMTETVSQENPLSQQISDVV
KQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLSSSYAGIRKVPSFTFTPTVAYQRGGE
GVSSAGRPGLLNIGESATQPWLADTWPNSCSNHNDCSINCCTAGNGNSDSNLATYSRPAD
CIANYNNQMENKQTNLMVPESGVYGDVDLSNKINEMKTFNSPNLKDGRFVGPGGQPTPYA
TTQLIQSSILGNNINSDRGTGGSGGGLGVGGEVNEKHCWKPTSVQQQKQEIGSQLQYNIM
EQNKLNKDRYRGGDSPMPATIPYNQTHDSHTGGSYNSSDRGSSSTSGSQGQKKGVRTPKL
PKQSTMNWADLLPPPPANPPPSRSTEEYSLSMEESCDPDMQCPMPPSHMYLQPDELEEEE
EEMERGPTPPIRGAASSPAAVSYSHQSTATLTPSPQEEMQPMLQDAPDSHDRRRHAVSPP
PPPRPLSPSHTYGYISSPLALDIDGLEEEDILEEEEDGDETDAEVAKMHYHHTHPHTHPH
HPQMHPRRLLLRGLEQTPASSMGDLESSVTGSMINGWGSASEEDNVSSGRSSAVSSSDGS
FFTDADFAQAVAAAAEYSGLRVAKYPNSQGQDIGGASARKYQINPSGHRPGSPVSTDSNM
SMAAVHRRPPKKQKQHPAGHPGSQRRDAFNEDLPPPPIPPPAVLKSPTHPSKVALEGRGV
ISPKAGEGRDKRGGTGGYRPREGSDTRTSSSERKDAQDRQKTAHGGKGNKHEGSTANKAR
QHAGSEDILPYSRPQFPTVNSPRDPSSSSSMSSRGSGGRRRGEGGRRNPADLGLNTSGAF
QPGDEELEMVES
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggcacatggtcaggggccacgccccttttcatcatggttctgctcagactggct
ccaggccaagaagttcctttagtcccagagacgggagtcgctcaggatggtgccagcgaa
ggggcaactccagctcctacctccgaacacgaagatgacaactctttgggctacacagga
tcccgtctgcgccaagaggacaccccaccccggattgtggagcacccatctgacctgatt
gtttccaaaggggagcccgctactctcaactgtaaggcggaggggcggccaaccccgaca
gtggagtggtacaaggatggagagcgggtggaaaccgaccgggacaatccccgatcgcag
cgtatgttgctgcccagcggctccctcttcttcctgcgcatcgtccacggacgacgcagc
aaaccggatgaaggttcttacgtctgcgttgcccgcaactacctgggagaggcagtgagc
cacaacgcctcactggaagtagccattctacgtgatgacttcagacaaaacccggcagat
gtgattgtggcagcaggagagccagcggtcttggagtgtcagcctcctcgtgggcatcct
gaacccaccatatcatggaaaaaagatggaacaaatattgatgaccgagatgagaggatc
accatacgtggagggaagctaatgatcacaaatgcccggaagaccgatgctgggaaatac
gtgtgcgttggcacaaacatggttggagaacgtgaaagtgaaatagcggaactgacagtg
cttgagcgtcccagctttgtacgtcgtcccggtagtcaggtggtgttagtggaccaaagc
gtggagttcaggtgtgaggcccgcggcgacccagttcccactgtacgctggaggaaagac
gacggtgacctgcctaaaggaaggtatgagattcgcgaggaccacaccttgaagatccgt
cgcctggcctcagccgacgtgggctcctacacctgtgtggcggagaacatggtgggcaag
gcggaggcatcggccacgctcaccgtccatgtcgtgtctgtgcccccagcatttgtggta
agaccaaggaaccaggtggttggagttggcagaactgtcaccctccagtgtgaagccact
gggaacccacaaccagccattttctggcaacgggaaggcagtcagaacctgctgttctcc
taccaacctcctcaaccctctagccggttgtctgtatctcagaccggtgacttgaccatc
actgatgctgaacgctcagacatgggatactacagctgccaggccctcaacattgctggc
agcgtgatcaccaaggctctgctagaggtcaccgatgtcgtgtcagaccgcccgccgccg
gttatccgacagggcccaacaaaccagacggtggctgtggacggtacagtcatcctcaac
tgtgtgacatctggaaaccccactcccaccatcctgtggaggaaagatggtgtcttagtg
tccacacatgactcaagggtcaaacagctggacacaggtgcactgcagatacgctatgca
aagcttggtgacactggcacctacacctgcatcgcctccacacccagcggggaggcttca
tggaaagcgtatttggaggtccaagaatttggagcccctgtccagccaaacagaccaact
gacccaaacctgatccccagtgccccttccaaacctgatgtcactgatgttagccggacc
tctatcaccctttcctggaaacctaatcttaatgctggagccacacccacctcctacata
atagaggccttcagtcatgcatcagggagcagctggcagaccttggcagagcatgtgaaa
actgagtcatttgtactgaagggcttgaagcccagcgccgtctacctcttcttagtacgg
gcagccaatgcctatgggctgagtgatcccagtcctatcactgatgctgtgaaaacacaa
gatatccctcccactagtcagggtgtcgaccatcgacaaatccagaaggagttgggagac
gtggttatccacctgcacaaccccaccatcctctcctcatcatctgtcagggtgcaatgg
acagtggagcagcagtcacagtatatccagggctacaaggtgatgtacaggccttcacct
gaggggctgcagaggagtgaatgggctgtgtttgaggtgcgaacccccggggaggacagc
gccgtcgtgccgcagcttcggaagggtgtcacatacgaattcaaagtccgccccttcttc
aatgaattccagggaaccgacagtgatgtcaaaattggcaagacgctggaggaagccccc
agtgcgcctcctcgtaaggttacagtgaccgagagtggggacaatgggaccgccattgtg
gtctcctggcaacctcctccagaagaggagcagaatggggtggtacaggagtacaagatt
tggtgcttggggaatgagagcaggtaccacatcaaccgtacagtcgatggttccacctta
tccgtgttgattcccagtctggccccagggatccgctacagtgtggaggtagcagccagc
accggggcgggtcccggggtcaagagcgatatcaccttcttccagcttgatgcatctggg
agaatgacagaaactgtgagccaggagaaccctctgtcccagcagatctcagatgtagtc
aaacagccggcctttatagcaggcataggagctgcttgttggattatcctcatggtcttc
agtatctggttgtacagacacaggaagaagaggaatggcctgtccagcagctatgcaggg
atacgcaaagtgccatcctttacttttacaccaacagtggcatatcaaagaggtggagaa
ggagtcagcagtgccggaaggcctggtttactgaacattggggaatctgccactcaaccc
tggctggctgacacgtggcccaactcctgctccaaccacaacgactgcagcatcaactgc
tgcactgcaggcaacggcaacagcgacagcaacctggcaacatacagtcgaccagccgac
tgtatcgccaattataacaaccagatggaaaacaagcagaccaacctcatggtgccagag
tcaggagtctatggggatgtagacctgtccaacaagatcaatgaaatgaagaccttcaac
agccccaacctaaaagatggacgctttgtaggtccagggggccagccgacaccttacgcc
accacccagctcatccagtcctccatcctgggcaacaacataaactcggacagaggcacc
ggaggcagcggaggcggacttggggttggaggggaggtgaatgagaaacactgctggaag
cccacctcagtccagcagcagaaacaggaaatcggctcccagctgcagtacaacatcatg
gagcaaaacaagctgaacaaggaccgttacagaggaggtgacagccccatgccagccacc
atcccctacaaccagacccacgacagccacactgggggctcctataacagctctgaccga
ggcagcagtagcacctctgggagtcagggtcaaaagaagggagtgcgcacccccaaacta
cccaaacaaagcacaatgaattgggctgaccttctgccccctcctcctgcaaacccaccc
ccaagtcggagcacagaggagtactccttatcaatggaagaaagctgtgatccagacatg
cagtgccccatgcccccctctcacatgtacctgcagcctgatgagctggaggaggaggag
gaggagatggagaggggtcctactcctcccatccgtggggcagcttcttcccctgctgca
gtatcttacagtcaccagtccacagccactctcaccccctcaccccaggaggagatgcag
ccaatgctccaggatgcaccagacagccatgatcgcagacgccatgctgtgagcccacca
ccccctccgaggcccctctctccgtcacacacatatgggtacatcagcagcccgttggcc
ttggacattgacggtttggaggaggaggatatattggaggaagaggaggacggcgacgag
acagacgcagaggtggctaagatgcactaccaccacacccacccccacacacaccctcac
catccccagatgcatccgcgaaggttgctgctacgagggctcgaacagacgcctgcatcc
agcatgggcgacctagagagctcagtgaccggttccatgatcaatggatgggggtcagct
tctgaagaggataatgtctcttcagggaggtccagcgcagtcagctcatcagatggatcc
ttcttcacagacgccgactttgctcaagcagttgctgcagctgcagagtattcgggcctc
agggtggcaaagtaccccaattcacagggccaagacattggaggagcttcagcacgaaaa
taccaaataaacccatcaggccaccgtcctggcagcccggtgtctacagacagtaacatg
agtatggcagctgtacacaggaggcctcctaaaaagcagaaacagcatcctgcaggtcat
cctgggagtcagcggcgtgatgccttcaatgaagatctcccacctccacccattccacct
ccagcagtgcttaagtcccctacacacccctccaaggtggccctggagggtcggggagtc
atttcccctaaagcaggtgagggtcgagacaagagaggaggaacgggaggctatcggccc
cgggagggctcagacaccagaaccagctcgtctgaacgcaaagacgctcaggacagacaa
aagacagctcatggagggaaagggaataaacacgagggtagcactgccaacaaggcgcgc
cagcacgcaggttcagaggacattctgccctatagccgaccacagttccccacagtcaac
agccctcgagacccaagctcctccagctccatgtcctccaggggctcagggggccggcgg
agaggagaaggaggccgcaggaaccctgcagacttgggcctcaacacttctggagccttc
caaccaggagacgaagagctagagatggtagaaagctga
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integrated database retrieval system
