Amphiprion ocellaris (clown anemonefish): 111571550
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Entry
111571550 CDS
T06018
Symbol
grin1a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1a isoform X12
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04020
Calcium signaling pathway
aoce04080
Neuroactive ligand-receptor interaction
aoce04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
111571550 (grin1a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111571550 (grin1a)
04082 Neuroactive ligand signaling
111571550 (grin1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aoce04040
]
111571550 (grin1a)
Ion channels [BR:
aoce04040
]
Ligand-gated channels
Glutamate (ionotropic)
111571550 (grin1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
111571550
NCBI-ProteinID:
XP_023130545
Ensembl:
ENSAOCG00000021970
UniProt:
A0AAQ5YZU8
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Position
17:27470614..27514517
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AA seq
901 aa
AA seq
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MRLFLLAVLLSCSCARAGCEPKIVNIGAVLSQKRYEQVFKDAVTQANQVYGRDKFKLTAI
SVTHKLNAIQMALSVCEDLISSQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDLMREFNWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENLDQLSYDNKRGPKAEKVLQFSQETNLTALLLEAKELEARVIILSA
SEEDAAAVYKAARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHIND
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKTRLIQVGIYNGTQVVMNNQRKIIWPGGETEKPQGFQMSTRLKIVT
IHQEPFVYVKPTMPDGTCKEEMTLNGVLIKKVICTGPNETIPGRPIVPQCCYGFCIDLLI
KLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
AAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQQYPPTDITGQLNLSDPSVSTV
V
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcttcctgctggcggtgctcctgtcgtgctcctgcgctcgggccggctgcgag
cccaagatcgtgaacatcggggccgtgctgagccagaagaggtacgagcaggtcttcaaa
gatgccgtgacccaggccaaccaggtctacggccgggacaagttcaagctgaccgccatc
tccgtaactcacaaactcaacgccatccagatggctctgtccgtgtgcgaggacctcatc
tccagtcaggtctacgccatcctggtgagtcaccctccacagtccaatgaccacctcacc
ccgacgcctgtctcctacactgcaggcttctaccgcatcccggtggtggggctcaccacc
cgcatgtccatctactccgacaagagtatccacctgtcctttctgcggacagtccctcca
tactcccaccaggctcacgtctggttcgacctgatgcgcgagttcaactggaatcacatc
atcctgatcgtgagcgacgaccacgagggccgggctgctcaaaagaggctcgagaccctc
ctggaggagcgagaaacaaagaataaaaaaaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacctaaggcagagaaagtcctccagttcagccaggagactaac
ttaactgccctgctgctggaggcgaaagagctggaggccagagtcatcattctgtcagcc
agtgaggaagacgctgctgcagtgtacaaggctgcccgcttcctcaacatgactggctcg
ggctacgtgtggctggtgggcgaacgcgagatgtcgggtaaagccctgagtgaggcgcca
gacggtctgatcggcctccagctcatcaacgggaagaatgagtcggcacatatcaatgat
gcagtggctgtggtggctcagtccattcaggagctctttgagaaggagaatatcacggaa
cccccgagaggatgcgtgggcaacaccaacatctggaaaacaggcccgctgtttaaacgg
gtgctgatgtcgtctaaatacccagaaggcctcacgggacgagtggagttcaatgacgat
ggagacagaaaatacgcccactacagtatcctcaactaccagaagactcggctcattcaa
gttggcatttacaacggaacacaggtggtaatgaacaatcagcggaagatcatctggccc
ggaggcgagaccgagaaaccacagggcttccagatgtctactcgattaaagatagtgacg
atacaccaggagccatttgtgtatgtgaagcccactatgccggacggaacgtgcaaggag
gaaatgacattaaatggagtcttaattaaaaaggttatctgcactgggcccaatgagacc
atcccaggacgcccaattgtgccccaatgttgttatggattctgtattgatctgctgatc
aagctggctatgaccatgaactttacctatgaggtgcacctggtggctgatggaaagttt
gggactcaggagcgggtgaacaacagcaacaagaaagagtggaatggcatgatgggagag
ctcctgggaggcctggctgacatgatcgtagccccgctgactataaacaatgaacgagcc
cagtacatcgagttctccaaaccgtttaaatatcaaggcctcactatcttagttaaaaag
gaaatccctcgcagtacactggactcatttatgcagccgttccaaagcacgctgtggctg
ttggtgggtctttcggtgcatgtggtggcggtgatgctttacctactagaccggttcagc
ccatttggaagatttaaagtaaatagtgaagaagaagaagaagacgccctcaccttatca
tctgctatgtggttctcctggggagtgttgctgaactctggtattggagaaggtgcgccg
cgcagcttctcagcgagaatcctcggtatggtgtgggctggatttgccatgatcattgtg
gcttcctatactgctaacctggctgccttcctggtgctggaccggcctgaggagcgcatc
accggcattaatgacccaaggctgcgaaacccatcggacaagtttatctacgccacggtg
aagcagagctccgtggacatctacttccggcggcaggtggagcttagcaccatgtaccgc
cacatggagaagcacaactatgagagtgccgccgaggccatccaggccgtgcgtgacaac
aagctgcatgctttcatctgggactctgcggtgctggagtttgaagcctcgcagaagtgc
gacctggtgaccacgggagagctgtttttccgttcgggctttggcataggcatgcgcaag
gacagcccctggaaacagaatgtgtccctggccattctcagttctcatgagaacggcttc
atggaagacctagataaaacctgggtgagataccaggagtgtgactcacggagcaatgcc
ccagccacactcacctttgaaaacatggcaggtgtcttcatgctggtggctggaggcatt
gcagcagggatcttcctcatcttcatcgaaatcgcctataagcgccataaagacgcccgc
aggaagcagatgcagctggcctttgcggccgtcaatgtctggaggaagaacttgcagcag
tacccacccactgacatcacgggccaactcaacctgtccgacccgtctgtcagcaccgtg
gtgtaa
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