Amphiprion ocellaris (clown anemonefish): 111571593
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Entry
111571593 CDS
T06018
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111571593 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111571593 (gspt1)
03012 Translation factors [BR:
aoce03012
]
111571593 (gspt1)
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
111571593 (gspt1)
Translation factors [BR:
aoce03012
]
Eukaryotic type
Release factors
111571593 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
111571593
NCBI-ProteinID:
XP_023130610
Ensembl:
ENSAOCG00000020972
LinkDB
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Position
18:complement(23181948..23197099)
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AA seq
586 aa
AA seq
DB search
MDPRDTAPDSWELEEDAEAPAAAAGLPTAFAALNVNAKPFVPNVNAPVFVPSFLQATTVE
MPASDGSSDPVASMEVAETAAPVENGGTEADMTTEEETWEQKEEPGGGEGGGGQEDQGTG
GASEEGGATCKEEDEMMEEEEEEMPMPKVAPAPPDAPKKEHVNVVFIGHVDAGKSTIGGQ
IMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKH
FTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVK
HLIVLINKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKDPV
PECPWYTGLPFIAHLDSLPNFTRSSDGPVRLPIVDKYKDMGTVILGKLESGSISKAQQLV
MMPNRHTVEVLSLLSDDVETDDAGPGENLKLRLKGIEEEEILPGFILCSPDNLCHSGRTF
DAQIVIIEHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQVC
IARLRAAGVICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacacagccccggattcgtgggagctggaggaggatgccgaggccccg
gctgccgcggcggggctcccgaccgcctttgccgcccttaacgtcaacgccaagccgttt
gtcccgaacgttaacgccccggtgtttgtgcctagcttccttcaagccaccaccgtggaa
atgccggcttcagacggttcctctgatccagttgccagcatggaggtggcagagacagcc
gctccagtggagaacggaggcacagaggccgacatgaccacagaggaggagacgtgggag
cagaaggaggagccggggggaggcgaagggggtggaggacaggaggaccaggggacggga
ggagcctctgaggaggggggcgccacttgtaaagaggaagacgagatgatggaggaggaa
gaagaggagatgcccatgcccaaagtggctccggcaccaccagatgcccccaagaaagaa
cacgtgaacgtggtcttcatcggtcacgtggatgccggcaaatcaaccatcggaggccag
atcatgtacctaactggaatggtggacaagcgaactctggaaaagtatgaaagagaagca
aaagaaaaaaacagggagacatggtacctgtcgtgggctctggacactaatcaggaggag
agagacaaagggaagacggttgaggttgggagagcttactttgagactgagaaaaaacat
ttcaccatcctggatgcacccggacacaagagctttgtccccaacatgattggcggggcg
tcacaagctgacctggcagtcctggtgatttcggcaagaaagggagaatttgagactgga
tttgagaagggtggacagacacgggaacacgccatgctggctaaaacagcaggggttaaa
catctcatcgtcctgatcaacaagatggatgatcccactgtcaactggagcctagaaagg
tatgaggagtgtaaggagaagctggtgccatttttaaagaaggtgggcttcaaccctaaa
aaggacatccactttatgccttgctctggactcacaggtgccaacctcaaggacccagta
cctgaatgcccctggtacacgggattgccatttatcgcccacctggacagtttgccaaac
ttcaccagatccagtgacgggcctgtcagactacccatcgtagacaagtacaaggatatg
ggaacagttatcctcgggaagctggagtctggatccatcagtaaagcccagcagctggtc
atgatgccaaacaggcacacagtggaggtactgagcctgctgagcgatgatgtggagaca
gacgatgctggtcctggagagaatctaaagttaaggctgaagggcatagaggaggaagaa
atcctccccggttttatcctctgtagccccgacaacctctgccactctggtcgcaccttt
gatgcacagatcgtcatcattgagcacaaatcaatcatttgtcctggttataatgcagtt
cttcacatccacacatgcattgaagaagtgcaaatcacagccttaatctgcctggtggac
aagaagacgggggagaaaagcaaaacacgaccacgctttgttaagcaggaccaggtgtgt
atcgccaggctgagggcagcgggagtcatctgcttagaaaccttcaaagacttccctcag
atgggacggttcacgctgcgagacgaaggcaaaactatcgccatcggcaaagtgctgaag
ctggtgccagaaaaggactaa
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