Amphiprion ocellaris (clown anemonefish): 111571607
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Entry
111571607 CDS
T06018
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-B-like isoform X2
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03013
Nucleocytoplasmic transport
aoce03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111571607
03015 mRNA surveillance pathway
111571607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111571607
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111571607
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_ACIN1
RRM_3
RRM_7
RRM_occluded
RRM_MUD2_C
RRM_5
Nup35_RRM_2
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
111571607
NCBI-ProteinID:
XP_035806196
Ensembl:
ENSAOCG00000026728
LinkDB
All DBs
Position
18
Genome browser
AA seq
275 aa
AA seq
DB search
MAPSPTKRKEDDKSKQRGKEKSETKKEGADKDRGREKNRTRRSASSGSSRSSSSSSSSSG
SSSGSSSGSSSSASSHSGSSSSRSSSSSSSSSSPSPSRQRHNNRRRSRSKSKSAKKDDRD
RRRRSPTPKPTKVYLGRLTRNVIKEHIQEIFSTYGKIKMIDMPMNRIHPHLSKGYAYVEF
ETPEEAEKALKHMDGGQIDGQEITVTAVLTPTVRPPPRRLSPPRRMPPPPPMWRRTPPRM
RRRSRSPRRRSPVRRRSRSPGRRRHRSRSSSNSSR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcaccttccccaacaaagaggaaggaggatgacaaaagtaaacagcgtggtaaagag
aagtcagaaaccaaaaaagagggagctgacaaagacaggggtcgagagaagaaccggaca
cgacgcagtgcttccagtggcagcagcaggtccagctccagctccagcagcagctcgggt
tccagctctggatcctccagtggctccagctcctctgcctccagccactcgggctcctcc
agctcccgctcctcttcctcttcatcctcatcctcctcgccgagccccagccgccaacgc
cacaacaacagacgacggtcacgctcaaaatcaaaatcagcaaagaaggatgacagagat
cgacgacgtagaagccccacacccaaacctaccaaggtctacctgggccggctgaccaga
aatgtcatcaaggaacacatccaggagatcttctccacttatggcaagatcaagatgatt
gacatgccgatgaaccgcatccaccctcatctgtccaagggctacgcttatgtggagttt
gaaacccctgaggaggcagagaaggccctgaaacacatggatggaggtcagattgacggt
caggaaatcacagtcacggccgtgctgactcccacagtgcgtccccctcctcgcaggctg
tcccctccacgcaggatgcctcctccacccccgatgtggcggcgaactcctcctcgaatg
cggagaaggtctcggtctcctcggcgacgctctccggtgcggcgcaggtctcgatcaccc
ggccgacgccgccaccggtcacgctccagttccaactcttcccgctag
DBGET
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