Amphiprion ocellaris (clown anemonefish): 111571688
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Entry
111571688 CDS
T06018
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111571688
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
111571688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
111571688
NCBI-ProteinID:
XP_023130740
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Position
11:complement(28644635..28670438)
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AA seq
910 aa
AA seq
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MGLKDHLEDGTGRILSLGLDLDYLHVEGAERQADPNFATAAGNIGVLQATADAPSSSSNS
IGSTSTSFSTHSSYSSSSSSCSNLSEESAISDSEDERLQSESKNLHHRESSRLDLAPNQS
SGDPPQPEPLAPTDPVTDCRTKVEFALKLGYSEDLVLLVLRKLGPDALINDVLGELVKLG
TKTEMEQPGGLIVSQSPSPSLSSSLACSSSSDSPLDSCRLLCPSKLLEDKENLRPVVVDG
SNVAMSHGNKEVFSCQGIQLAVDWFLERGHQDITVFVPAWRKEQSRPDALITDQEILRRL
EKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLANEKPEWKKFIDE
RLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVVPEHRKQPCPYGKKCTYGHKCKFYH
PERGSKPQRSVADELRASVRISSVASRGLLENALTIKSQSGKSEEMVEAEPSRSVGNKQL
NQSPRRAFADLMEDRLRVHSKAEGRRGSSGSSSCSSSIVGHPAPGGPPSSSGRRDCCELP
GGGSGSSLRAAGGSGLIQAESHHRCESPEVGYRSLVKTYSSLSLLVPQNPECFFPADLRA
GSLLSDCSSEGSVSSDSFSPDPMLDDSPKCHHHPHHNHHYSGQYAQLPSLVYHGLTQHST
CGYSVPPGLRRHHGFGMEDPPSSVPSHASPRPFKTTSSYIPPQCQRPLLSSFVGDLPLRP
PHPPLPSTTHSQPQSSPFSRNLMGSLWQEGGLQDSRVYEGSPLQSRRSYSGLNQKPQHQI
NWDTNCQATPNPCYDPFSYKSLPQVHGKSWCSPWSQQALSSPHSLSAASLPPQQPLPSIA
THKTHLPPAPQHQEPPALGRYQDLRERVFANLCGIFPPDLVRMVMTRNPHMMDAQELAAA
ILMEKSQHGS
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaaggaccatctggaggatgggacaggccgcatcctcagtctggggctggat
ctggactacctccatgtggaaggtgctgagcggcaggccgacccgaactttgcgacggct
gctgggaatataggagtcctccaggccacagctgatgccccgagcagcagcagcaacagt
attggcagcaccagcactagttttagcactcattcaagctacagcagcagcagcagcagt
tgcagcaacctttctgaggagagtgccatctctgacagtgaagatgaacggctccagtct
gaatctaaaaacctccaccacagggagtcctccaggctggacctggcaccaaaccagtcc
tctggagaccctccacagccagaaccattagctcccactgaccccgtcactgactgccgc
accaaagtagagtttgctctcaagctcggctactctgaggacctggtgctgctggttctt
aggaaactgggccctgacgcactcatcaatgatgtactgggagagctagtcaaactggga
accaagacagagatggagcagccaggaggtctgattgtctcccagtctccctccccatct
ttgtcatcctctctggcctgctcttcctcctccgactcccctctagactcctgccggcta
ctgtgtccgtccaagctgctggaagacaaagaaaaccttcgtcctgttgttgtggatgga
agcaacgtagccatgagtcatggaaacaaagaagtgttctcctgccaaggcatccagctg
gcagttgattggttcttggagcgaggtcaccaggacatcacagtttttgttccggcctgg
aggaaggagcagtcgcgacccgatgctcttatcacagaccaagagatcctccggcgactg
gagaaagagaagatcctggttttcactccatctcgtcgcgttcagggacgtcgtgtggtt
tgttacgatgacagattcattgtcaaactggcctacgagtcggatggcataatcgtgtcc
aatgacaactaccgggatctggccaatgaaaagccagagtggaagaagttcattgacgaa
cgcctgctgatgtactcatttgtgaatgacaaattcatgccaccggatgacccactggga
cgccacggaccgagtctggagaactttctgaggaagaggcctgttgttcctgaacaccgg
aagcaaccatgtccttatgggaaaaagtgcacatatggccacaagtgtaagttctaccac
cctgaaagaggcagcaaaccccagcgatctgtggccgatgaactccgtgccagtgtcaga
atttcatcagtcgcttccagaggcttgttggaaaacgccctgacgataaagagccaaagt
ggtaaatcagaagaaatggttgaggccgagccaagtcggagcgtcggaaacaaacagctg
aatcagagccctcggagagccttcgctgatcttatggaggacagacttcgggtccattcc
aaagctgaaggccggaggggaagcagcggcagcagcagctgtagcagcagcattgtgggt
catcctgctccaggtggacccccatcatcatctggacgtcgggactgctgtgagcttcct
gggggaggcagtggaagcagcttaagggctgctggaggttctgggctgatccaggctgag
tcccaccacagatgtgagtctccagaggtgggctaccggtctctggtgaagacctattca
agccttagtctcctggttcctcagaatcctgaatgctttttcccggctgatctgcgagca
ggctcgctgctttcagactgcagcagtgagggaagtgtcagctccgactctttctcccca
gaccccatgctggacgacagccccaagtgccaccaccatcctcaccacaatcaccactac
tctggacagtacgctcagcttccaagcctcgtttaccatggattaacccagcactctaca
tgtggttactccgttcctccaggactgcgtagacaccatggctttggcatggaggaccct
ccatcatctgttccttctcatgcatctccacgtcccttcaagaccacttcttcctacatc
ccaccccagtgtcagcgcccgttgctgagcagttttgttggggatttaccacttcgtcca
ccacacccgcccctaccttccaccactcactcccagcctcagagctcccccttcagtcgc
aatctgatgggctccctttggcaggaaggtgggcttcaggactccagagtgtatgagggg
tcaccacttcagtctagaagaagctactctggactaaaccaaaaaccgcaacatcagata
aactgggacaccaactgtcaggcaaccccaaatccttgctatgatccgttttcctacaag
agtctcccacaagttcacggaaagtcttggtgttctccttggagccagcaagcgctttcc
tcacctcatagcctttcagcagcaagtcttccaccacagcagcctcttccatccatcgct
acccacaagactcacctgcctccagctcctcagcaccaggagccaccagccttgggtcga
taccaagacctgagggagagagtgtttgctaacttgtgcggcatcttccctccggatttg
gtgaggatggtgatgaccaggaaccctcacatgatggatgctcaggagcttgcagctgca
attttgatggagaaatcgcagcacggttcttga
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