Amphiprion ocellaris (clown anemonefish): 111571707
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Entry
111571707 CDS
T06018
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111571707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aoce04121
]
111571707
Enzymes [BR:
aoce01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111571707
Ubiquitin system [BR:
aoce04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111571707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
TRIM_CC
zf-C3HC4
PRY
zf-RING_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
NDNF
Motif
Other DBs
NCBI-GeneID:
111571707
NCBI-ProteinID:
XP_023130772
Ensembl:
ENSAOCG00000017669
LinkDB
All DBs
Position
24:5522655..5591141
Genome browser
AA seq
687 aa
AA seq
DB search
MDTLESELTCPICLELFEDPLLLPCAHSLCFGCAHRILVSHCTTNESVQSIGAFQCPTCR
YVISLSPERGLEGLKRNVTLQNIIDRVQRASSSAGLPLPLPTPHSGPNSPGEEGSNRLAL
VPVSAAMSSPGTPPEPVQCQFCEQDPPQDAVKTCVTCEVSYCEECLRATHPNKKPFTGHR
LIEPMPDSHLRGLQCLEHEEEKVNMYCVTDDQLICSLCKLVGRHRDHQVAALSDRYEKLR
QALDSNLSNLIKRNNELESLMGKLIQTCQHVEVNASRQEGKLLEECDVLIDIIQQRRQII
GSKIKEGKTQRLRKLAQQISNCKQCIERSSALITQADQTLKETDHARFLQTAKSINERVS
MATASTQVLIPEIHLTDTFDTFALDFTREKKLLENLDYLTAPSAPCIREELCTASYDTIT
VHWTSDDEFTVVSYELQYAIFTGQSNIASLCNSLESWMIVPNIKQNHYTVHGLQSGTKYI
FVVKAINQAGSRSSEPGTLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETTSKKGHSQE
RFTSQSSYGVVGNVYIDSGRHYWEALIGGSTWYAVGIAYKSAPKHEWIGKNSASWVLCRC
NNSWVVRHNSKEMAIEPSPHLRRVGVLLDYDAGYLTFYDAVGSQHLHTFHVSFVQPVCPV
FNVWNKCLTILTGLPIPDHLEGLEPNN
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggacactctggagtcagagctgacctgcccaatctgcctggagctctttgaagacccg
ctgctgctcccctgcgcccacagcctgtgcttcggctgcgcccaccgcatcctcgtctcc
cactgcaccaccaacgaatccgttcagagcatcggcgccttccagtgccccacctgtaga
tatgtcatttccctgagtccggagcgtggactagaaggactgaagagaaacgtgaccttg
cagaacattatcgatagagttcagcgggcttcatcttccgccgggctgcctctaccgcta
cccaccccccacagtgggcccaactcccccggagaggaagggagcaaccggttggcgctg
gtccccgtcagcgccgccatgtccagccctggcacgcctccagagccggtccagtgccag
ttctgcgagcaggacccgccgcaggacgccgttaagacatgcgtgacgtgcgaggtgtcg
tactgcgaggagtgcctcagagcgactcacccgaacaagaagccgttcaccgggcaccga
ctcatcgagccgatgcccgactcccacctcagggggctccagtgcctggagcacgaggag
gagaaggtgaacatgtactgtgtcactgatgatcagctgatctgctcattatgcaaactg
gttggaaggcacagggaccaccaagtggcagcactgagcgaccgctatgaaaaactcagg
caagccctggactccaacctgagcaatttgatcaagaggaacaacgagttggagtctctt
atggggaaactgatccagacttgtcaacatgtcgaggtgaacgcgtcccgtcaggaggga
aagctcttggaggagtgcgatgtcctgattgacatcattcagcagaggaggcagatcatt
ggcagcaagatcaaagaggggaagacgcagcggcttcggaagctcgcccagcagatctcc
aactgcaagcagtgcatagagaggtcgtcggctcttatcacgcaggccgatcagacgttg
aaggaaaccgatcacgctcgcttcctgcagacggccaagagcatcaacgagagggtttcc
atggcaaccgcatcaacccaagtgctgatccctgagatacacttaaccgacacgttcgac
acctttgccctggacttcaccagagagaagaagttgctggagaatctggattacctgact
gctccgagtgctccgtgcataagggaagagctgtgcacggcttcctacgacaccatcact
gtccattggacgtctgatgatgagttcacggtggtgtcctatgagctccagtacgccatc
ttcacgggacagtccaacattgccagtctgtgcaactcgttggaaagttggatgattgta
cccaacatcaagcagaaccactacacggtgcacggtctgcagagcggcaccaagtatatc
tttgttgtcaaggccattaaccaagcgggaagcaggagcagcgaaccagggactctgaag
accaacagccaaccgttcaagcttgaccccaaatctgctcacaagaagctcaaggtgtcc
cacgataacctgacagtggaacgggatgaaaccacgtccaagaaaggccacagccaggag
aggttcaccagccagagcagctatggcgtggtgggaaacgtctatatcgacagcgggcgt
cactactgggaggctctgattggagggagcacatggtacgctgtgggtatcgcctacaaa
tcagcccctaaacacgagtggatcggcaagaactcggcctcttgggtgctctgccgctgc
aacaactcctgggtggttcgccacaacagcaaggagatggccatcgagccgtcgccccac
ctgcgacgcgtcggcgtcctgttggactacgacgccggctacctgaccttctacgacgcc
gtgggctcccagcatcttcacacgttccacgtctccttcgtccagcccgtgtgtccggtg
ttcaatgtctggaacaagtgtctgaccattctcaccggtctacccatccccgatcattta
gagggactggagcccaacaactga
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