Amphiprion ocellaris (clown anemonefish): 111571794
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Entry
111571794 CDS
T06018
Symbol
srf
Name
(RefSeq) serum response factor isoform X1
KO
K04378
serum response factor
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111571794 (srf)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111571794 (srf)
Transcription factors [BR:
aoce03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
111571794 (srf)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
111571794
NCBI-ProteinID:
XP_023130916
Ensembl:
ENSAOCG00000013807
LinkDB
All DBs
Position
Unknown
AA seq
602 aa
AA seq
DB search
MLPSQVGSAPSGNGSASGRGTTGHGSGVVGGGIRPVLVRAGQALPGVCDSVAGAPGRPGD
RDAVGMLGANGPGGPRGARPGNGTGVNPLQTAVQGNMVGLNAGVVLPHGARFDPERESAP
MCSGSDNDSDSGDDDDPVGSLGDSRRGVKRERGEMEAAVAGQEVGVAPGGYGMVPGGVAG
AKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGH
VYTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDPSTDQRMSATGFEETDLTYQVSES
ESMGDTKDTLKPTFTVASLPGTTSSAQSTVPTTSTTMQVSSGPSFPITNYLAPVSANSNV
SANGTVLKSAGASTGVMQLPSGFTFMPAGTPLPPGTPTIPLSQLQQHSLALQGQHGQTLA
AAPQPQQGQQAVFRFPAAVSLTGAGVPQQLQAIQVHPNTQSTSNSDSSPEISHTSTNSTA
TVSLPATIVTSSVPTSVAGHMMYPSPHTVMYASTPTLADGGLAVLNAFSQGTSAMQVSHA
QAQDTGAVPQVFLTAPPGTVQIPVSAVQLHPMVIGQQSSGSSSNLTELQVVNLDAAQNSK
SD
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgagccaggttggatcggcaccatctggaaacggctcagcttcaggcaggggt
accacaggacacggttcgggggttgtcggcggcgggattcgtcccgttttggtcagagca
gggcaagctttaccgggggtctgcgacagtgttgccggtgctccggggcgaccgggggac
agagacgccgtcgggatgctgggtgctaacggtccggggggtccgagaggggccagaccc
gggaacgggaccggagtgaaccctctacagaccgccgtccaaggcaacatggtggggctg
aacgcgggagttgtgttgcctcacggagcccggttcgacccggagcgggagagcgctcct
atgtgcagcggctcggataatgactcggactccggggatgatgatgacccagtgggttca
ctcggggacagcaggagaggggtgaagcgggagagaggggagatggaggcggcggtggcg
gggcaggaggtgggagtagctcccggaggttacggcatggtgcccggaggggtcgccggg
gcaaagccggggaagaagacacgtgggcgcgtaaagataaagatggaatttattgacaac
aagttgagacggtacaccaccttcagtaagaggaagacgggcattatgaaaaaggcgtat
gaactctccactctgacaggaacccaggttctgctgcttgtggccagtgaaacgggtcac
gtctacacttttgccacccgcaaactccaacccatgatcaccagtgaaacgggcaaagcc
ctgatccaaacatgcctcaactcaccagactcgccaccgcgctctgacccctccacagac
cagcgtatgagtgccacgggcttcgaggagacggacctcacctaccaggtgtctgagtcg
gagagcatgggtgacacaaaggacacactgaagccgacgttcacggtagccagcctacca
ggcactaccagcagcgcccagtccacagtacccaccacctccaccaccatgcaggtgagc
agcgggccttcgtttcccatcaccaactacttggcccccgtctcggccaacagcaacgtc
agcgccaacggaactgtcctgaagagcgccggcgcctccacgggggtcatgcagctgccc
agtggcttcactttcatgcccgcaggcactcctctcccccctggcacccccaccattcca
ctgagccagctgcagcagcactccctggccctccaggggcagcatggtcagactctggcc
gccgccccgcagccacagcagggacagcaggctgtcttccgcttccctgctgctgtctcc
ctcacaggtgcgggggttccccagcagctccaggctatccaggtccatcctaacacccag
tccacctccaacagtgacagcagccctgagatctcccacacctccacaaactccactgca
acggtaagtctcccagcaaccattgtcacttcatcagtgccaacgtccgtggcaggtcac
atgatgtaccccagcccccacacggtgatgtacgcctccacgccaacgctggctgacggg
gggctggctgtgctcaacgccttctcccagggaacctcggccatgcaggtgtcccacgca
caagcccaggacacgggtgctgtccctcaggtgttcctcacagcacctccaggcacggtg
cagatccccgtctcagcagtgcagctacacccaatggtgattggccaacagtcgagcggc
agcagcagtaatctgacggagctccaggtggtgaacctggacgcagcacagaactcaaag
agcgactga
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