Amphiprion ocellaris (clown anemonefish): 111571909
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Entry
111571909 CDS
T06018
Name
(RefSeq) collagen alpha-1(XIV) chain
KO
K08133
collagen type XIV alpha
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
aoce00535
]
111571909
Proteoglycans [BR:
aoce00535
]
Extracellular matrix (ECM) proteoglycans
Others
111571909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
DUF4959
VWA_3
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
111571909
NCBI-ProteinID:
XP_054873670
LinkDB
All DBs
Position
15:complement(26091959..26337775)
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AA seq
1856 aa
AA seq
DB search
MQLSVGLSLCLLGFILVSVCPQTVHGQVSSPRRFRAKVLSPTKLHVSWKEPKGEFESYKV
LYSTSPGEVQRVAEVSKQDAKLIIEDFDPMKEYNFKIIAVRGGKESKPLQAKHEAQRSAA
ETTQSQKRQSSGGTEETNEISEEGFMCKTPAIADIVILVDGSWSIGRINFRLVRTFLENL
VRAFSVEFDKTRIGLAQYSGDPRIEWHLNTHTTKESVIDAVKNLPYKGGNTLTGLALTFI
LENSFKPESGSRPGVPKIGILITDGKSQDDVIPPAQSLKDAGIELFAIGVKNADENELKA
IASPPEETHVYNVADFSVMSDIVEGLTKTVCDRVDQLDKQIKGDGEPAPPPASVAPPRDL
VTSAITARSFRVSWTHAPGQVEKYRVVYYPASGGQPEEKVVQGTENSVQLNYLNSLTEYQ
VAVFAIYRSSASEGLRGSATTLALPMVNDLELFDVTHSTMRVRWKIAAGASGYMILYAPL
TEGDPADEKEVKVSDSVNEVELEGLTPATEYTVTVYAMYGEEASDPMTSQQTTLPLIPAR
NLRFSDVDHSSARLTWDSASRKVRGYRVMYVKTKGVQTNEVDVGSVTNWWLRNLTSLTEY
TVGVFAIYDEGQAEAVTDSFTTKTVPDPVDLKSRDVSTESFRVSWTHPATDVVLYRLIWT
PTDGGDSEEVLVNGNINTYVITGLSPSTEYEVLLAAIYANEVESDEVILVESTVERTTTI
ATTTKTTAAPRFGVRNMRVDEETTFSLRVSWQPVDYRNVRHYRLSYISAKGDRAEEMRTV
PTGQNSLVLQPLLSDTEYKVAITPVYADGDGPTAAQMGRTLPLSAPKNLRVSEEWYNRFR
ISWDAPPSPTMGYRVVYQPLSAPGRALETFVGEDVNTMLIVNLLSGTDYSVKVIASYTTG
SSEALTGRAKTLYLGVTNLSTYQVKMNSLCTQWQPHRHANAYRVVLESLVGSQKQETKLS
GGSSRHCFNNLKANTQYKISVYAQLQDGTEGPAVTATEKTCKYTQILNVEKKEICKAAKA
DLVFLVDGSWSIGDDNFLKIIRFLYSTTGALDQIGPDGTQVAIVQFSDDARTEFKLNSYS
DKERLLDAINKITYKGGNTKTGRAIQHVKENIFTAEAGLRRGIPNVLVVLTDGRSQDDVN
KVSKEMQMAGYIVFAIGFADADYGELVSIASKPSDRHVFFVDDLDAFKKIEEKLVTFVCE
AATATCPSVPMSGSTTPGFRMMELFGLVENRYSSISGVSMVPGTFNAFPCFHLHSNALLA
QPTRYIHPEGLPSDYTVTLLFRLLADTPEEPFALWEILNKNNEPLVGVIMDNGGKTLTFF
NNDYKGDFQTVTFEGPEVKKLFYGSFHKLHIAISKTSAKVFIDCKMVAEKNINAAGNITT
DGMEVLGRMVRSRGNKDNSAPFQLQNFDIICSTSWANRDKCCEIPGLRKEVDCPALPKAC
TCTQDSKGPPGPAGVPGGPGIRGARGDRGEPGPVGPTGPAGETGVPGPQGPPGPQGPSGR
SIIGPPGSPGERGQKGEAGQQGSQGIPGRAGAPGREGPPGPRGLPGKDGPPGRQGPSGTI
GTPGAPGAPGTTGPPGKQGELGPPGLPGTKGEKGERGDLQSTASVQAIARQVCEQLIQSH
MARYNSILNQVPSPPVSIRTVPGPPGEPGRQGSPGTQGEQGPPGRPGFPGQNGQNGQPGE
RGQPGEKGEKGSPGVGVQGPRGPPGPPGAQGQGRPGSQGSTGRPGNPGAPGRPGVPGPVG
PTGPPGYCDQNSCVGYNVGEGEDVTDGGAIPAVQLPSNVFQNYGEVEEDDPYRYYQPNYP
APRPVSPDDPALALDNVELRSPGVHRSSRSVNMKAEETVLERRLKREAKILPGLTN
NT seq
5571 nt
NT seq
+upstream
nt +downstream
nt
atgcagctctcagtcggactgagtctctgcctgctgggcttcattctcgtctcagtttgc
cctcagacagtgcatggccaagtttcatcaccacggaggtttcgtgccaaagtactgagc
cccaccaagctgcatgtgtcttggaaagaaccaaaaggagagtttgaaagctacaaggtc
ctttacagcacatcaccaggtgaagtgcagagggtggctgaggtatcgaagcaggacgcc
aaactgatcatcgaagactttgacccgatgaaagaatacaactttaagatcattgcggtc
agaggggggaaggagagcaaacctcttcaggccaaacatgaagctcagcgatcagctgcg
gaaacgactcaatcccaaaagagacaaagcagcggcggcaccgaggaaaccaacgagatc
tcagaagagggcttcatgtgtaagactccagccatcgccgacatcgtgatcctggtggac
ggctcctggagtatcggccgcatcaacttcaggctggtgaggaccttcctggaaaacctg
gtccgggccttcagcgtggagttcgacaagaccagaattggcttggctcagtacagtgga
gacccccgcattgagtggcatctgaacactcacaccaccaaggagtccgtgatcgacgcc
gtgaaaaacctgccgtataaaggaggaaacacgctgacgggtttggctctgaccttcatc
ttggagaacagcttcaaaccggagtctggatcaagacccggggttcccaaaatcggaatc
ctcatcaccgacgggaagtcccaggatgacgtgatccctcctgcacagagcctgaaggat
gctgggattgaactatttgccattggtgtgaaaaacgctgacgagaatgagctgaaggcc
atcgcctctcctccggaggaaactcacgtctacaacgtggcagacttcagcgtgatgagc
gacatcgtggaaggactcaccaagacagtgtgcgaccgcgtggatcagctcgacaagcag
atcaaaggtgacggagaacctgccccaccaccggcatccgtggctccacctcgtgacctc
gtaacatcggcgatcacggctcgcagtttccgggtgtcgtggactcacgctccgggtcag
gtggagaaataccgggtggtgtactatcccgctagtggaggacagcctgaggaaaaggtg
gtccaggggacggagaacagcgtgcagctcaactacctgaattctctgacagagtaccag
gtggctgttttcgccatttatcgaagctccgccagtgagggtctgagaggcagcgccacc
acattggccctgccgatggtcaacgacctggagctgtttgatgtcacgcacagcaccatg
agggtccgctggaagatcgccgccggggcttctgggtacatgatcctgtacgccccgctg
acggagggagaccctgcagacgaaaaggaggtgaaggtgtcggactcagtgaatgaggtg
gagctggagggtttgactccagccaccgagtacacggtgacggtttacgccatgtatgga
gaagaggccagcgaccccatgaccagccagcagaccacattaccactgatccctgcaagg
aaccttcgtttctcagacgtggaccacagctcggcccggctcacgtgggactcggcctcc
aggaaggtcagaggctacagagtgatgtacgtgaagaccaaaggagtccagaccaatgag
gtggatgttggcagcgtgacaaactggtggctaaggaacctaacctccctgaccgagtac
acagtcggtgtctttgccatctacgatgaaggacaagccgaggccgtgaccgacagcttc
actaccaagactgttccagacccggtggatctgaagagcagggacgtctccacagaaagc
ttcagggtgtcatggacgcacccggcaacggacgtggtgctgtacagactcatctggacg
cccaccgacggaggagacagcgaggaggttctagtaaatgggaatatcaacacctacgtg
ataacaggactgagcccctccacagagtacgaagtcctcctggccgccatctacgccaac
gaggtcgagagcgacgaggtgatcctggtcgaatccactgttgaaagaacaaccaccatc
gctacaaccaccaagaccacagcagctcctcgtttcggagtgaggaatatgagggtcgat
gaggaaaccaccttcagtctgcgggtctcctggcagcctgtcgactacagaaacgtccga
cattatcgactgagctacatcagcgctaagggagaccgagcagaggaaatgaggacggtg
cccaccggtcagaacagcctggtcctgcagccgctgctgtcagatacagagtacaaagtg
gccatcactcctgtttacgctgatggagacggaccgacggccgcacaaatgggacgaaca
cttcctctttcagctcctaagaacctgcgagtctcagaggaatggtacaaccgtttcagg
atcagctgggatgctccaccttcacccactatgggatacagagtcgtctaccagcctctg
tcggcccctggacgggctctggagaccttcgtgggggaggacgtgaacaccatgctgatc
gtcaacctgctgagcgggacggattacagcgtcaaggtgatcgcgtcctacaccaccgga
tccagcgaggccctgacagggagggccaagaccttgtacctgggggtgaccaatctgagc
acctatcaagtgaagatgaacagtttgtgcacccagtggcagcctcaccgacacgccaat
gcctacagagtggtcctcgagtcgctggttggtagtcagaagcaggagacgaagcttagc
ggaggatccagcagacactgtttcaacaacctgaaggccaacactcagtataagatcagt
gtttacgctcagctgcaggacgggaccgaagggcctgcagtcactgccaccgagaagacc
tgtaagtacactcagatactcaatgtagaaaaaaaggaaatttgtaaagcagccaaagca
gacctggtcttcctggtcgacggttcctggagcatcggcgacgacaactttctgaagatc
atcagattcctctacagcaccaccggagctctggaccagatcggcccggatggcactcag
gtggcgatcgtccagttcagcgacgacgcccggactgagttcaagctgaactcgtacagc
gacaaggagcgactgctggacgcaatcaacaagattacctacaagggaggaaacaccaag
acaggtcgagccatccagcacgtgaaggagaacatctttacagctgaggcaggactccgg
agaggaatccctaacgtcctggtggttctcaccgacggtcgatcgcaggacgacgtcaac
aaagtttccaaagagatgcagatggcaggttacattgtgttcgccatcggttttgctgat
gccgactacggagagctggtgagcatcgccagcaaacccagcgacagacacgtctttttc
gtggacgatctggatgcctttaagaagattgaagagaagctggtgaccttcgtgtgtgaa
gccgccaccgccacttgtccatctgtaccgatgagtggcagcacaactccaggcttccgt
atgatggagctgtttggccttgttgagaaccggtacagcagcatctccggtgtttccatg
gtccctggcaccttcaacgctttcccctgtttccacctgcacagtaatgctctgctggca
caaccgaccaggtacatccatcctgaggggctgccctccgactacaccgtcaccctgctg
ttcagactgctggctgacacccctgaggagccattcgctctctgggaaatcctcaacaag
aacaacgagccactggtgggagtcatcatggacaatggaggaaaaactctgacattcttt
aataacgactacaaaggagattttcagacggtcacattcgaagggccagaagtcaaaaaa
ctcttctatggcagcttccataagcttcacattgcaatcagcaagacgagcgccaaagtg
ttcatcgactgcaagatggtggccgagaagaacatcaacgcggcaggaaacatcaccaca
gacggaatggaagttctgggcaggatggttcgctcaagagggaacaaggacaactcagca
ccgttccagctacagaactttgatatcatctgcagcacttcgtgggccaacagagacaag
tgctgtgaaattcctggtctaagaaaggaggtcgactgcccagccttgcccaaagcctgc
acctgcacccaggacagcaaaggccccccaggccctgctggagtaccaggaggcccagga
atcagaggagccagaggtgatcgcggagagccgggccccgtggggccgactggtcctgct
ggggaaacaggtgtaccaggacctcaggggccgccggggccacaaggacccagtggacgc
tctatcattggacccccgggctctccaggtgagagggggcagaaaggtgaggctggacag
caaggatcgcagggaattcctggtcgagccggagctccagggagggaaggacctccagga
cccagaggactgccaggcaaagacggacccccaggcagacagggaccttcaggaactatt
gggactccaggagccccaggagcccctggaacaacaggacctccaggaaaacagggagaa
ctgggaccaccaggtcttcctggaaccaagggggagaaaggtgaaaggggtgatctccag
tcaacagcgtcagttcaggccatcgccaggcaggtctgtgagcagctgatccaaagccac
atggcacgctacaactccatcctgaaccaagtacccagcccaccggtatccatccgcaca
gttccaggacctcccggagagcccggccgacagggatccccaggtactcagggagaacag
ggacccccaggacgacctggcttcccaggacagaatggacagaatgggcaaccaggagaa
agaggtcaaccaggagagaagggtgagaagggatctccaggagtcggtgttcaaggaccc
cgaggacccccaggacctcccggtgcccaaggacaaggccgacctggcagccagggttct
acaggtcgacctgggaaccctggcgctcccggtcggcctggagtccctggacccgtcggc
cccaccggacctccgggatactgcgaccagaactcctgtgtgggctacaatgtcggagaa
ggcgaggatgtcactgacggcggcgctatccccgcagtccaactgccgtccaacgtcttc
cagaactacggcgaggttgaggaagacgacccataccgctactaccagcccaattacccg
gcgcctcgccccgtgtcgcccgacgaccccgcactcgccctcgataacgtcgagctgcgg
tcccccggcgtccaccgcagctcccggagcgtgaacatgaaggccgaggaaactgtgttg
gagaggagactaaagagagaagccaagatactgccaggactaactaattga
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