Amphiprion ocellaris (clown anemonefish): 111571986
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Entry
111571986 CDS
T06018
Symbol
pcdh1a
Name
(RefSeq) protocadherin-1
KO
K16498
protocadherin delta 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
111571986 (pcdh1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aoce01009
]
111571986 (pcdh1a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aoce04515
]
111571986 (pcdh1a)
Protein phosphatases and associated proteins [BR:
aoce01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111571986 (pcdh1a)
Cell adhesion molecules [BR:
aoce04515
]
Cadherins
Protocadherins
111571986 (pcdh1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
PepSY
Syndecan
Motif
Other DBs
NCBI-GeneID:
111571986
NCBI-ProteinID:
XP_054873191
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All DBs
Position
14:complement(17799518..17952338)
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AA seq
1190 aa
AA seq
DB search
MELNFRVVLFWVVVLLCGSAEGSILYRVQEEQPPNTLIGSLAADQGLPDSGHLYKLEVGA
PYLRVDGKTGDIFTTEIPIDRETLRDCRSLAKGKPCYLEFEVSVTDLIQNQSPRLIEGRI
EVQDINDNTPQFPSSVLTISVPENTIMGALFSIPLATDRDSDRNGVADYALTAGPDAATL
FGLQVADDRGGKLPQLIVLGNLDRELKDSYDLTIKAVDGGNPQRYSSALLRVVVTDANDN
SPKFEKSTYEAEVSENSPVGHSVLQVKANDSDMGPNGEIEYTLHQAVDPVPKLLRIDRST
GIIYVKGPLDREEISSLSFYVVARDKGPQPKSSKTFVTIEVTDQNDNAPAVEIRGIGLVT
HSEGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSSSDNKRKY
FLQTTTPLDYERIRDYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPIFSPTLFEVDFA
EENQPGEKVLDVTASDADSGTNAELLYNIVAESSIKGLFEIDPNTGEVRARSPLDREHKE
RYEFRVTAADKGSPVHKGTATVVIKVLDRNDNDPKFMLSGYSFSVLENMPPLSPVGMVTV
LDMDKGENARVHLSVEPDGGKFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPRS
SYVGVTINVLDENDNDPVITKPSNSSFRRLSPLASPDSHVEVVEAEDLDSGPNAELVFSI
AGGNPYQLFRISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKPARHATALVHIYVNETI
SNVSLVEALVGHSLYTPLDRDIAGDPDNGFAAQRSNILFGSLAGVAGVVMLILVVVFIRH
RIQRETKSGYQAGKKETKDLYAPKQAPKNAKGKRGRKGKPQKSPKPLGEDEEVSLQKSLK
FNLDGVNDSPRIHLPLTYSPGSPDIGRHYRSNSPLPSIQLQAQSPSASQKHQAVQDLPAA
NTFVGTGGDDNSTGSDQYSDYSYKTSQPKYNNKQHPHRRVTFSTTNPVQDLQDASQHSYY
DSGLEESETPSSKSSSGPRIGPLTLPEDHYERTTPDGSIGETEHPENDIRSLPDVAMTGN
CTTECSELGHSDACWMPGHPSPVRKTRNPPKLSTFVPYQERGSLGRLANGSARLGGEEHR
SRLPPSRSAYSSSGHDASQDCPLEEMPLSVASEFPPTSPSAHTPKREIYL
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaattttcgagtagtactgttttgggtcgtggtgctgctctgtggctctgct
gaaggcagcatcctgtaccgggtccaagaggagcagcctcccaacactcttattggtagc
ctggcagcagaccagggactgccagactcgggtcacctttacaagctagaggtgggtgcc
ccttaccttcgtgtcgatggaaaaacaggagacattttcaccactgagattcccatagac
agagagaccctgcgggactgccgatctctcgctaagggtaaaccctgctatctggaattt
gaagtatcagtgacagacctgatacaaaaccagagcccacgacttatcgaaggacgcatt
gaagtacaggacatcaacgacaacactccacaatttccctcttctgtgctcaccatctct
gtccctgagaacacgatcatgggggcattattctccattcctctagctacagacagggac
tcagacaggaatggcgtggctgactatgcgctgactgcagggccagatgcagcaaccttg
tttggtttacaagtggctgatgacagaggagggaagctcccacagctcattgtcctgggc
aatttagatcgtgagctgaaggattcctatgacctcaccatcaaggcagtggatggagga
aaccctcagcgctacagcagtgctttgctcagggtggtagtgaccgatgcaaatgataac
tcccccaagtttgaaaagtccacgtatgaagctgaagtttcagaaaatagtccagtggga
cactcagtgttgcaggtcaaagcaaatgactctgacatgggccctaatggagagattgag
tacacccttcaccaagcagtcgacccagtgccgaagctcttacgaattgatcgatccact
ggcattatctatgtcaaaggccctctggacagggaggaaatcagcagcttgtcattttat
gtggtggcgagggataaaggtcctcaacctaaaagctcgaagacatttgtaaccattgag
gtgactgaccaaaatgacaacgcaccagctgtggagatccgtgggattggtcttgtaact
cacagtgaaggagtggctaatatttcagaggacatgccagtgggaacagctgttgctttg
gtgcaagtgtctgacaaagatgaaggagagaatgctgtggtcacttgtgtggtagcagga
gatgtccccttccagctccgccctgccagcgactcctctagcgacaacaagaggaagtat
ttcctccagaccaccactcctcttgactatgaaagaattagggattaccgagtagaaatt
gtggctgtggattcgggtaacccagcactctccagtacaaactctttaaaggtgcaggtg
actgatgtgaacgataactctccaatattctccccaactttatttgaagttgattttgca
gaagaaaaccaaccaggggagaaggttttggatgttacagcctccgatgctgacagtggc
actaatgctgaactcctctacaatattgtggcagaatcatccatcaaaggtttgtttgag
attgacccaaacactggcgaagtaagagccagaagcccacttgatcgtgaacacaaagaa
cggtatgagtttcgagtcactgcagcagataaagggtcacctgttcacaaaggaacagca
actgttgtaataaaagtccttgatcgcaatgacaatgaccccaagttcatgcttagtggc
tacagcttttcagttttggagaacatgcctcccctcagtcccgttggtatggtgacagtc
ctagatatggataaaggtgagaacgctcgtgttcacctgtctgtagaacctgatggaggc
aagtttgttgttcagaatggaactggcaccattctctcaagcatctcatttgacagggag
aaagaaagcagctacacattccgtctaaaagcagtggatggaggagaaccacccaggtct
tcatatgtgggtgttaccatcaatgtgctggatgaaaatgacaacgaccctgtaatcact
aagccctccaactcctctttcaggcgtttgtcacctcttgcttccccagatagccatgtt
gaggtcgtggaagctgaagacctggacagtgggcccaatgcagagctggtctttagtatt
gctggtggtaacccttatcagttatttcgcatctccccctctagcggagagatcaccctg
gcaaaggagatgacccgcaaacatggtggactgcatcgccttgtggtgcgagtgagtgac
aggggcaagcctgcgcgccatgccactgctctggttcacatctatgtcaatgaaaccatt
tcaaatgtcagcttagtggaagccttagtcggacacagtctttacactccactagacagg
gacattgctggtgatcctgacaatggttttgctgcacagcgcagtaacattttgtttgga
agtctcgctggtgtggcaggcgttgtaatgttaattttggtggtggtatttattcgacac
cgcatccaaagagaaactaagagtggctatcaggctggcaaaaaggaaacaaaggacttg
tatgcgcccaagcaggcaccaaagaatgccaaaggcaaacgaggaaggaaaggcaaaccc
cagaagtccccaaaacctctcggggaagacgaagaggtcagccttcaaaaaagtctcaag
ttcaacctcgatggagtcaatgatagccccaggatacacctgcccctcacttattcacca
ggaagccctgatataggcaggcactaccgctcaaactcccccttaccctccattcagctg
caagcccaatcaccttcagcctctcagaagcaccaggccgtccaggacctgccagcagcc
aatacctttgtagggacaggaggagacgacaactctaccggctcagaccagtactcagat
tacagctacaagaccagccagccgaagtacaacaacaagcagcatccccatcggcgagtg
accttttccaccaccaatcctgtgcaggacctgcaggatgcctctcagcacagctactat
gacagcggcttggaggaatcggagactcccagcagcaagtcatcgtctggtccccgcatc
ggacccctgaccctgcccgaggaccactatgagagaaccactccagatggcagcattgga
gaaaccgaacacccggaaaacgatatccgctccctccctgatgtggcaatgactggaaac
tgtacaaccgagtgcagcgaattgggccactcagacgcctgctggatgcctgggcatccc
tcccctgtacgcaagaccaggaaccccccgaaactctccaccttcgtgccttaccaggag
agagggagcctgggacgcctggcaaatgggagcgccaggctgggtggcgaggagcaccgg
tcgcgccttccaccctcccgcagtgcctattccagcagtggtcatgatgccagtcaggac
tgccctttagaggagatgcccctgagcgtagcctctgagtttccacccacctccccttcc
gcccacactccaaaaagagaaatttacctgtga
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