Amphiprion ocellaris (clown anemonefish): 111572047
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Entry
111572047 CDS
T06018
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111572047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aoce04121
]
111572047
Enzymes [BR:
aoce01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111572047
Ubiquitin system [BR:
aoce04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111572047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-C3HC4
DUF6383
zf-C3HC4_2
RING_XB3-XBAT31
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
111572047
NCBI-ProteinID:
XP_023131294
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All DBs
Position
9:7279197..7281101
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AA seq
408 aa
AA seq
DB search
MAKSPGLARRGCLSPEGILREIQINLLECKVCFEMFNPQQRERRPQNLSCGHVLCLECIT
ALSHPLLRKLECPFCRQLCSVDSTSHCQVLTDLQELLLSRVPPPPPPHRSRGGFMLATGP
TCTPLHLHAAFGGWGTLINPTGIAVLGSSGSIVVVHDGEKRVVVFNLQGRKLQSFGRKGK
TNGEICYPIDVAVTPSGYVVVTDAGDRAVKVFTSRGNHVLTVKDSFQLPWGVDTDSCGQI
LVSDVQAGTLSQVKVDYNHGVILEHQAPISDLECPKAVACCQLTGNTAVMEHGARERHQY
RRLRVFSKDFHLLYQTDSFSLALQSPMKLNMSGVAFDRDGDVIVIDSNQGMICSLGKLQN
GPVLTPLIADHLIRPVGLVLLNNTLITLDSGDHTVKIYSATSDTGSLM
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggccaagagtcctggtctggcacgccgtggctgcctgagtcctgaggggatcctgaga
gagatccagatcaacctgctggagtgtaaagtctgcttcgagatgttcaatcctcaacag
agggagcgcaggccgcagaacctttcctgtggccatgttctgtgtctggaatgcatcacg
gctttgtcccaccctctcctcaggaagctggagtgcccgttctgtcggcagctgtgcagt
gttgacagcacctcccactgccaggttcttactgacctgcaggagcttctgttgtctcgg
gttcctcctccacctcctcctcacaggtcaagaggagggtttatgttggctacaggtccg
acatgcacacctctgcacctccatgctgcttttggtggatgggggactcttataaacccc
actgggattgcagttttggggtcttctgggtcgatagtcgtggtgcacgatggagaaaaa
agagtggtggtgtttaatctacaggggaggaagctgcagagttttgggcgaaaaggaaaa
accaacggggagatctgttacccgatagatgtggcagtgactcccagtgggtatgtggtg
gtgacggatgcaggggatagagctgtgaaggttttcacctccaggggcaatcatgtcttg
accgtgaaggattccttccagctgccctggggtgtggacactgacagctgtgggcagatt
ctggtctcagacgtccaggccggcacactgtcccaggtgaaagtggactacaatcatggc
gtcattctggagcatcaagcacccatttcggatcttgagtgtcccaaagccgtggcctgc
tgtcagctaactgggaacacagcggtgatggagcatggagcaagagagcggcaccaatac
agaaggctgagagtgttttctaaagacttccacctcctttaccagactgacagtttcagc
ttggcccttcagtctccgatgaagctgaacatgtcaggagtcgcgttcgacagagatgga
gatgtgattgtgattgattctaaccaggggatgatttgtagtttggggaagctccagaat
ggcccagttttaactccacttatagcagatcatcttatccgccccgttggtttggtgcta
ctgaacaacacgctcatcaccctggacagtggagatcatacagtgaagatttattctgct
acatctgacactggatcactgatgtag
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