Amphiprion ocellaris (clown anemonefish): 111572175
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Entry
111572175 CDS
T06018
Symbol
elavl1a
Name
(RefSeq) ELAV-like protein 1a isoform X1
KO
K13088
ELAV-like protein 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111572175 (elavl1a)
03041 Spliceosome [BR:
aoce03041
]
111572175 (elavl1a)
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
111572175 (elavl1a)
mRNA cycle factors
Stress granule specific factors
111572175 (elavl1a)
Spliceosome [BR:
aoce03041
]
Common components
Common spliceosomal components
General mRNP proteins
111572175 (elavl1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_10
RRM_7
BRAP2
Cyt-b5
Motif
Other DBs
NCBI-GeneID:
111572175
NCBI-ProteinID:
XP_023131495
Ensembl:
ENSAOCG00000020018
LinkDB
All DBs
Position
20:8930465..8938122
Genome browser
AA seq
348 aa
AA seq
DB search
MAVRRGHTKYLKADLQEVYDMSNGYEDHMGGDEGKDVKTNLIVNYLPQSMTQDELRSLFS
SIGEVESAKLIRDKVAGHSLGYGFVNYLNPSDADRAISTLNGLRLQSKTIKVSYARPSSD
TIKDANLYISGLPKSMTQKDVEDMFSRYGRIINSRVLADQATGTTGVSRGVAFIRFDKRA
EAEEAVKNLNGQKPPGTSEPITVKFAANPNQAKNTQLISQLYHNQSRRFGGPLHHQAQRF
RFSPMGVDHMGSMGGVSVPGNSTSGWCIFIYNLGQDADESILWQMFGPFGAVTNVKVIRD
FNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTSKGHK
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggcagttcgtcgaggacacactaagtacttgaaagccgacctgcaggaggtgtatgac
atgtcaaacggttatgaagatcacatgggaggggacgaggggaaggacgtcaagaccaac
ctgatagtgaactacctgcctcagagcatgacgcaggatgagctgcggagcctcttcagc
agcatcggagaggtggagtctgccaagctgatacgagacaaagtcgcaggccacagttta
gggtacggatttgttaactatcttaaccctagtgatgcagacagagctatcagtacactg
aatggactaaggctacagtccaaaactatcaaggtttcatatgcacggcccagctcggat
acaataaaggatgctaacctgtatatcagcggcctgcccaagtccatgacccagaaggat
gtggaggatatgttttcacgttatggccgcatcattaattcccgggtacttgcggatcag
gccacaggtacgacaggtgtgtcccgtggggtggctttcattcggtttgacaagcgggca
gaggctgaggaagctgtcaaaaacctgaatggccaaaagcccccgggaacctctgagccg
atcacagtgaagtttgctgccaacccgaaccaggcgaagaacacacagctcatctctcag
ctctaccacaaccagtcccgacgcttcggagggcccttacaccaccaggcgcagcgcttt
aggttttcacctatgggcgttgatcacatgggcagtatgggaggtgtcagtgtcccgggg
aactccacctctggctggtgcatcttcatctacaacctgggccaggatgcagacgagagc
atcctgtggcaaatgttcggtccctttggcgccgtcaccaacgtcaaggtgatccgagac
ttcaacaccaacaagtgcaagggcttcggcttcgttaccatgacaaactacgaggaggcg
gccatggccatcgccagcctgaacggctaccggcttggagacaagatactgcaagtgtcc
tttaagaccagcaagggccacaagtag
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