Amphiprion ocellaris (clown anemonefish): 111572255
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Entry
111572255 CDS
T06018
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111572255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoce03021
]
111572255
03036 Chromosome and associated proteins [BR:
aoce03036
]
111572255
Transcription machinery [BR:
aoce03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111572255
Coactivators
SAGA/TFTC/STAGA complex
111572255
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
111572255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
111572255
NCBI-ProteinID:
XP_023131600
Ensembl:
ENSAOCG00000030105
UniProt:
A0AAQ5ZE11
LinkDB
All DBs
Position
1:22949747..23045479
Genome browser
AA seq
1029 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLAGQSNPVGKTDENGGAGSVAPANHHLGK
TLPAPVSTTTLEQQQQGRRNKPEMRQEINSKDGSQDKTVTSPPLGCTPSFGEPSATSAAC
VNATSSGSQSHGASITTLTASGVSTLASPPASISTTTASSRGSKLSPGTAETSTEANPPR
KRIAAPRRSASARIKSLNGAAVTTRRNSNTAVADSVSPVETTATTPNSTRPLTSSINTST
FTLSNASLPVGQSAIALDRGTPTIALHRLPSHIVASIAQNGNGTSVSALVQQGARIGPVT
SAASPGNHDKAVTDTGASKTDDCQSKIVMSTQSSSVNSVINTVSPASSVVTPTTTTAAAT
TTTTVTQPLSSASTAAVTGMAASSVCGTAHTTSVTTTVSMVRPTAPSPTPAVATPAQPQP
RPGLTAPQRIVAPQLIVRPPQQQTTIQLPPGFTIPPGMVLVRTELGQLVMVPQQALAQAQ
AQAQAQAQAQAQNNISPRPATPTTGASFRVTTPQKGPVAPAVAVTAPQQTPVVMAPQAPA
QSASQPVQPQQTGIAAAPGAPVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSKNVKA
LVQDLLDAKIEPEEFTSRLQTELKSSPQPYLVPFLKKSLPALRLSLLNSQQSLTQPPQQG
VKPAPCGTPPAIMAGPAVRIRHPNSVSTTTGANTLPAGTLGHAAAVGVKTGGAVGGQVRM
PVVITQSIRAQGTMGKGAIIQAGKSPMGLPVQISGNQKNKLNDPGGGSFRDDDDINDVAS
MAGVNLNEESARILATNSELVGTQIRSCKDEAFLHPGLLHRRILETAKKFGVTEVPMEAV
TFISHATQSRLRTVVEKVSTIAQHRLDSCKDDECYEQSADVRSQLRFFEQLERIEKQRKD
EQEREILLKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRK
MDSPGATPSGTEVSGSTAGSPASSSAPSTSSRQYTRQRITRVNLRDLIFYMEQERETAHS
LLLYRALLK
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccccctggaagatatgcttttttcagaggtggatgaaaaagcc
gtgagcgacctggtgggctcattggagtcacagcttgctggacaaagcaacccagtggga
aaaacagacgaaaacggaggcgctggctctgtggcccccgctaaccatcacttaggaaaa
acgctaccagctccagtgagcaccacaacactagaacaacaacaacaaggacggcggaat
aaacctgagatgcgccaggagatcaactccaaagacgggagccaggataaaactgtcaca
tctcctccgctgggctgcaccccttcttttggcgagccatccgccacttcggctgcctgt
gtgaacgccactagcagcggctcgcaatcacatggagcatccatcacaacactgactgca
tctggtgtgtcaactttggcatctccgccggccagcatcagcaccaccaccgcatccagc
cgcggctccaagctttccccgggcacagcggagacgtcgacggaagcgaacccgccgaga
aaacgcatcgcggcgccgcggaggagcgcttcggctcggataaagagtttgaacggtgcg
gctgtgacgacgcggaggaacagcaacacagcggtagccgacagcgttagccccgtggag
accaccgcaactacaccaaactctacccgacccctcacgtcctctattaacacgtcgact
ttcaccttatccaacgccagcctgcctgtggggcagtcggctattgctctcgaccggggg
actcctaccatcgctctgcacagactccccagtcatattgtagccagtatagcccagaac
ggcaacgggaccagcgtgtcggccctggtccagcagggagcccgcataggacccgtcacc
tccgcagcttccccgggaaaccacgacaaagcggttacagacactggggcttccaaaaca
gacgactgtcagtccaaaattgtaatgtcaacccagtctagtagtgtcaactctgtaata
aacactgtttctcctgcttcctctgttgtcacgccgacaactactacagcagcagctaca
accaccacaacagtaacccagcctctgagctctgcctccactgcagctgtcacagggatg
gcagctagttctgtgtgtgggactgctcacactacatcagtgaccaccactgtcagcatg
gtcagacccacagctccctccccaacgcccgctgtggccacccctgcacagcctcagccc
cgtcctggacttacagcacctcagaggattgtagcgccccagctgattgtcagaccacct
cagcagcagaccaccattcagctgccccctgggtttaccatcccaccggggatggtgttg
gtacgcacggagttaggccaactggtcatggttccccagcaggctttggctcaagctcaa
gctcaggctcaggctcaggctcaggcccaggcccaaaacaacatctctcctcgacctgct
acacccaccacaggggcatccttcagagtaacaactccacagaagggccccgtggcaccg
gccgtggctgtgacggctccgcagcagacccccgtggttatggccccccaggctccagcc
cagtcggcctcccagccagtgcagcctcagcagacgggcatcgccgcggcccccggagct
cctgtcgtgtcccaggaaatgcaagagaatgtgaagaaatgtaagaatttcctggccaca
ctaatcaagttagcatctcacaattctccatcccctgagacctccaagaacgtcaaggct
ttggttcaggacctgctggatgccaagattgaaccggaggagttcaccagccggctgcag
actgagctcaagtcgtctccgcagccttacctggtgccctttctcaagaagagcctcccg
gccctgaggctgtctttgctgaatagtcagcagtccctgacccagcccccgcagcaggga
gtcaaaccagcaccctgcggcacccctcctgccatcatggctgggccagctgtccgcata
cgccaccctaacagcgtcagcaccaccacgggtgccaatacactgcctgctgggacactc
ggacatgcagctgccgtgggtgtcaaaacaggaggcgctgttggcggccaggttcggatg
cccgtggtgatcacacagtccatcagagcgcaaggcacaatgggaaagggagccatcatc
caagcaggcaaaagtcccatgggcctgcctgttcagatctctgggaatcagaaaaacaag
ctcaacgaccccggaggaggctctttcagggatgatgacgatatcaatgacgtggcgtct
atggccggggtaaatctgaacgaggaaagtgcaagaatactcgccaccaattcagagctg
gtgggaacgcagattcgctcatgtaaagacgaggccttcctccatccgggactgctacac
cgacgaattctagaaacagctaagaagtttggtgttacggaggtccccatggaggcagtg
acattcatctcacacgccacgcagtcacgacttcggactgtggtagaaaaggtttctaca
atcgcacagcaccgactggactcctgtaaggacgatgagtgctacgagcagtctgcagac
gttcgctctcagcttcgcttcttcgagcagctggagagaattgagaagcagaggaaggac
gagcaggagagagagatccttttgaaagccgctaaaagtcgctccaggcaagaagaccca
gagcaagctcgactgaaacagaaagctaaggagatgcaacaacaagaactggcccagatg
agacagcgagatgccaaccttacagcactagccgccattggaccccgcaaaaaacgtaaa
atggattcgccaggggccacaccatcagggaccgaggtttccggcagcacggcgggctcc
cctgccagctcctctgccccgtccacctcatcacgccagtacacgcggcaacgcatcact
cgcgtcaacctcagggacttaattttctacatggagcaggagagagagaccgcccactcc
ctcctcctttaccgtgccctgctcaagtag
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