Amphiprion ocellaris (clown anemonefish): 111572265
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Entry
111572265 CDS
T06018
Symbol
vps54
Name
(RefSeq) vacuolar protein sorting-associated protein 54 isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aoce01009
]
111572265 (vps54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoce04131
]
111572265 (vps54)
Protein phosphatases and associated proteins [BR:
aoce01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111572265 (vps54)
Membrane trafficking [BR:
aoce04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
111572265 (vps54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
SBP_bac_6
PETase
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
111572265
NCBI-ProteinID:
XP_023131613
Ensembl:
ENSAOCG00000017438
LinkDB
All DBs
Position
4:23256743..23283483
Genome browser
AA seq
990 aa
AA seq
DB search
MASSHSSSPVPRPGSGGRDGIYRKDRDPSPPRCRTIRSLPDVCPKEPTGEVRGLCNGPSV
VAEHDRWTVLSSKVNLPAALNDPRLAKRESDFFTKTWGLDFAETEVMPSFYLPNITREDF
GPYLQEMAQRERIHERCKTICPNKDDVDAVSSITTNHDKSRAELEQVPKIFMKPDFALDD
PATFNNVLPWSHFNSAGGKSSRDVASSKLLQEKLSHYLDVVEVSIARQISLRSEAFFHAM
SSQHELQDRLQETQQAVAVLRGRTAAMDRVMCQGPLQALRKAMTRNNCVKLHNKLKLMAA
VHQTQPTVQLLLSTSEFVGALELIATTKEVLQQELQGIHSFRHLGSQLCELEKLIDKMMV
EDFSMYSRSDLSRSLKDEPQVLEKVHKPNAESQKERLESLVFGLLRQRKLDFLDIYSDEM
ILAAKAIVTQCVTDSVVHIEEIDTEVVIKQADQMRLMTFPQWFELLKNVFECFLLFLQRI
KATLNIIRNVVVEVLNSNQKNRLLEQASSGASGQETSQSPSVLQGEAELAYLTHEGLFIS
DALNEAQQQAALAAQDQSSTVGSRIQQGRLETAGSDLTSGTSEMSASREQSIMSGENMMP
TELELNRVVNNVQELLYTASDVSHDRCVKVLTARAKDGSLERLSSAEFVCLSQAVEGFVR
DTEELSGRRSVSLRGALQSQANRFVHRFHEERKTKLSLLLDNERWKQAEVPAEFQDLVNS
IADGKITLPERKTTGPDEKKPAEFLLVNGQKYAVVGTVLLLIRIFLEYCQCVNDIPSIAT
DMLTRLSDLLKHFNSRSCQLVLGAGALQVVGLKTITTKNLALASRCLQLVVHYIPIIRAH
FETKLQPKQFSVLRHFDHITKDYNDHIAEISAKLVAIMDSLFEKVLSKYEVKAPMPSACF
RNVCKQMAKMHEAIYELLPEEQTQMLFLRINASFKMHLKRQLARLGVINDGGPQHGLVVV
DVAFYTENIQALKSLERLDLNMAEIWEQKR
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggcctccagccacagctcctccccagtgcctcgtcctggaagtggaggccgagatggg
atctaccgtaaggaccgggatccctccccccctcgctgtcggaccatccgctctctgcct
gatgtctgccccaaagagcccaccggtgaggtgcgaggcctgtgcaacggaccttctgtt
gtggcggagcatgaccggtggacggtgctcagctcaaaagtcaacctcccagctgcactg
aacgacccacgactggctaaacgagagtctgactttttcaccaaaacatgggggctggac
tttgcagaaaccgaggtgatgccctccttctacctccccaacatcaccagggaagacttc
gggccctacctgcaggagatggctcagagggaacgaatccacgaacgctgcaagacgatc
tgtcctaacaaagacgacgtggacgccgtctcaagtatcaccaccaaccacgacaaatcc
agagctgagttggaacaagtcccgaagatttttatgaagccggactttgccctggatgac
ccagccaccttcaacaacgtcctgccctggtctcactttaacagcgccggtggaaagagc
agcagagacgtggcttcctccaaactgctgcaggagaagctgagccactacctggatgtg
gttgaggtgagcattgctcgacagatctcactgcgctccgaggcctttttccatgctatg
tcctcgcagcacgagttacaggaccggctgcaggagacgcagcaggctgtggctgtgctg
cggggccggacggcggccatggaccgggtcatgtgccaggggcctctccaggcccttcgc
aaagcaatgactcgcaacaactgtgtgaagctgcacaacaagctgaagctgatggcagcg
gtgcatcagacacagcccaccgtgcagctgctgctctctacctccgagtttgttggagca
ctggagctcatcgccaccaccaaggaggtgctgcagcaggagctgcagggaatacacagc
ttcagacatctgggctcccagctgtgtgagctggagaagctgatcgataagatgatggtg
gaggacttcagtatgtattcccgcagcgacctgagccgaagtctaaaggacgagccacag
gtcctagagaaggtccacaaaccaaatgcagagtcacaaaaggagcgtctggagtcgctg
gtgttcggtctgttgagacaaaggaagctggactttctggatatttacagtgatgagatg
atcctggctgctaaggccattgtcacacagtgtgtgacagacagtgtcgtgcacattgaa
gaaattgacaccgaagtcgtcataaaacaagctgaccagatgcgtctgatgacgttccct
cagtggtttgagctgctgaaaaatgtctttgagtgtttccttctcttcctgcagagaatc
aaggccactctgaacatcatcagaaatgtggttgtggaggttctgaactcaaaccagaag
aaccgtctcctggagcaggccagttcaggggcatcaggccaagagacttcacagagcccg
tcggtcctgcagggggaggccgagctggcctacctcacccacgagggtctgttcatcagc
gacgccctgaatgaggcccagcagcaggcagcgctggcggcccaggatcagagctccaca
gtgggctccaggatccagcagggccggctggagactgcaggcagtgacttgacatctgga
acctcagagatgtcggccagcagagagcagagcatcatgtcaggggagaacatgatgccc
actgagctggagctgaaccgtgtggtcaataatgtccaggagctgctgtacactgcctcc
gatgtcagccacgaccgctgtgtcaaagtgctcacagcaagagcaaaggacggctctctg
gagcgtctgagctcggccgagtttgtgtgtctgtcgcaggcggtggagggttttgtccgg
gacacagaggagctgtcaggcagaagaagcgtctcattgaggggggcgctgcagagccag
gccaaccgcttcgtccaccgcttccatgaagaacgcaagaccaaactcagcctcctccta
gataatgagcgctggaagcaggcagaggttcctgcagagtttcaggatctggtgaactcc
atcgctgatggaaaaataacactaccagagcgcaaaaccacaggtccagatgagaagaaa
cctgctgaatttctgcttgttaacgggcagaaatatgcagtcgttgggacggttctgctg
ctgatccggatctttctggaatactgtcagtgtgtcaatgacatcccatccattgccacc
gacatgctgacgcgtctgtcggacctcctcaagcacttcaactctcggagctgccagttg
gttctgggagctggagctctgcaggtcgttggcctcaagaccatcaccaccaaaaacctc
gcgttagcgtcccgctgtctgcagctggtggttcactacattcccatcattagagctcat
ttcgagaccaaactgcagcccaagcagttcagtgtcctcagacacttcgatcacatcacc
aaggactacaatgatcacatagcagagatctctgctaaactggtggccattatggacagt
ctgtttgagaaggttttatcaaagtatgaagtgaaggctccgatgccctcggcctgcttc
agaaatgtctgtaagcagatggcaaagatgcacgaagccatttatgaactcttacctgaa
gaacagacacagatgttgtttctaaggatcaatgccagctttaaaatgcacctgaagagg
cagctggctcgacttggggtcattaatgacggaggaccacagcacgggctggtggtggtc
gacgtggccttctacacggagaacatccaggcgctgaagagcctcgagcgactcgacctg
aacatggctgagatctgggagcagaagaggtga
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