Amphiprion ocellaris (clown anemonefish): 111572287
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Entry
111572287 CDS
T06018
Symbol
ptbp2a
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoce03041
]
111572287 (ptbp2a)
Spliceosome [BR:
aoce03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111572287 (ptbp2a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
111572287
NCBI-ProteinID:
XP_023131644
Ensembl:
ENSAOCG00000016995
LinkDB
All DBs
Position
22:complement(3267043..3286221)
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AA seq
515 aa
AA seq
DB search
MDGISDVAVGVKRGSEELSMYNSPNSGMSSISDGASNGSDSKKLRVEEAPPSRVIHIRKL
PNEASEAEVIALGLPFGKVTNILTLKGKNQAFLEMGTEEAAITMVNYYTTVTPHIRNVPV
FIQYSNHKELKTDASNQRTQAVLQAVSAVQSPSSDVQEILAAASSPVLRIIIDNMFYPVT
LDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLALDGQNIYNSCCTLRID
FSKLVNLNVKYNNDKSRDYTRPELPAGDGQPSLDPTVAAAFSKDSNSLLGKIPGALNPLS
AAAAAAAAAGRVALAGQAGSSGVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKD
SALIQMSDSNQAQLAMSHLNGQKMYGKIIRVTLSKHQTVALPRDGLDDQGLTKDYANSPL
HRFKKPGSKNFQNIFPPSATLHLSNIPQDVTEDDLRLLFSNAGGTVKAFKFFQDRKMALI
QMSTVEEAIQALIDLHNYNMGGNQHLRVSFSKSTI
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggacggcataagtgatgtagcagttggagtgaagagaggatcagaagagctgagtatg
tacaacagtcccaactctggcatgagcagtatcagtgacggggcttccaatggcagtgat
agtaagaagctcagggtggaggaggccccaccatctcgtgtgatccacattagaaagctg
cccaacgaggcttcagaggctgaagtcattgcccttggcctgccttttggcaaagtcacc
aatatcctcacattaaaggggaagaaccaggcattcttggagatggggacagaggaggca
gccatcactatggttaattactacacaacagttacccctcatatccgcaatgtccctgtc
ttcattcagtactccaaccacaaagaactcaaaactgatgctagtaatcagcggacccag
gcagtgctgcaggcagtgtcagcagtccagtcgccaagttcagatgtgcaggagattctt
gctgcagcctccagtcctgtactacggatcatcattgacaacatgttttaccctgttaca
ctggatgtactgcaacagattttctccaagtttggcacagtcatgaagataatcacattc
accaagaacaatcagttccaggccctactgcaattcagtgatcctgtcaatgcacagcag
gccaaactggccctagatgggcagaacatctacaattcatgttgcacattgcgcattgac
ttttccaagctggtcaacctaaatgtcaagtacaacaacgataaaagtcgtgattacact
cgacctgaactgccggctggtgacggccaacccagtctcgaccccacagtggctgctgcc
tttagcaaagactcgaactcgctcctcggtaagatcccaggagcccttaaccctctgagt
gcagcagcagcagcagctgctgctgcagggagggtggcccttgctggacaggcgggatcc
agcggggtcctcctggtcagcaacctgaatgaggagatggttacgccccaaagtctgttt
accctcttcggagtgtatggtgatgtccagagggtgaaaattctttacaataagaaggac
agcgctctcattcagatgtcggattccaaccaggcccagctcgcaatgagtcacctgaat
ggccaaaagatgtatggcaagatcatccgagtgacgctgtctaagcaccagactgtggcg
ctgcctcgtgacggcctggatgaccagggcctgaccaaggactacgccaactctccactt
catcgcttcaagaaacctggttccaagaacttccagaacatcttcccaccatctgccaca
cttcacctctctaacatcccacaagatgtaacggaggatgacttacggctgctgttctcc
aatgctggaggcactgtgaaagcattcaagtttttccaggatcgtaaaatggctctgatc
cagatgtcaacagtggaggaggctatacaggccttgattgatcttcacaattacaacatg
ggaggcaaccagcacctgagagtgtctttctctaagtccaccatttaa
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