Amphiprion ocellaris (clown anemonefish): 111572458
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Entry
111572458 CDS
T06018
Symbol
arfgef1
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X2
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111572458 (arfgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoce04131
]
111572458 (arfgef1)
Membrane trafficking [BR:
aoce04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
111572458 (arfgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
111572458
NCBI-ProteinID:
XP_023131896
Ensembl:
ENSAOCG00000011040
LinkDB
All DBs
Position
22:15061551..15118926
Genome browser
AA seq
1932 aa
AA seq
DB search
MFEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKEESEKLSPPSGDGKS
GSSTLPPIKSKTNFIEADKYFLPFELACQSKCPRIVITSLDCLQKLIAYGHLTGSAPDST
APGKKLIDRIIETICACFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALQEAKQLERERHRQHSPVTQHTEPDSP
QLQTHIHLQAKGLTQEANGPVTPSTPSINIPSTPSTPSTPAPESSSRSVSGEQEEQREPE
EQGEQGPVYENPDPENGSEFCVAENEQTEADQATAAAQNAAAQQHAQAGEEEDEETPNYE
EKAQEIVQSILQEVVNTVAGGHCLDPAKLCSDTKECGGEGEPAESEPTEAVTEGTQSSLE
DEGTIGSDSEHVHANGIPGTPISASFTPSLPDDRLSVSSNDTQESGAAPGQPPGAKFSHI
LQKDAFLVFRSLCKLSMKPLSDGPPDPKSHELRSKVLSLQLLLSILQNAGPIFKTNEMFI
NAIKQYLCVALSKNGVSSVPEVFELSLSIFLTLLSHFKTHLKMQIEVFFKEIFLYILETS
TSSYDHKWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLVNDLSKIAQGRGGHEL
GTTPLQELTLRKKGLECLVSILKCMVEWSKDQYVNPNSQTSLGQEKPSEQESTETKAPET
INRYGSINSLDSTASSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFNKKPKRGIQ
YLQEQGMLGTTPEDLAQFLHQEERLDSTQVGEFLGDNDRFNKEVMYAYVDQMDFQGKDFV
SALRMFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADTAYVLAYSIIMLTTDL
HSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYDEIAGKKIAMKETKELTMKSNKQS
VASEKQRRLLYNVEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKLAWTPFLAAF
SVGLQDCDDTEVASLCLEGIRCAIRIACIFSIQLERDAYVQALARFTLLTASSGIAEMKQ
KNIDTIKTLITVAHTDGNYLGNSWHEIMKCISQLELAQLIGTGVKARYISGTVRGKEGFV
TSTKEQSNDEYLGLVGGTVDRKQIASIQESIGETSSQSVVVAVDRIFTGSTRLDGNAIVD
FVRWLCAVSMDELASPTHPRMFSLQKIVEISYYNMGRIRLQWSRIWEVIGDHFNKVGCNS
NEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKKNRSPTIRDMVVRCIAQ
MVNSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHIVTNVFEKHFAATIDSFQD
AVKCLSEFACNASFPDTSMEAIRLIRHCAKYVSERPQAFKDYTSDDMNVAPEDRVWVRGW
FPILFELSCIINRCKLDVRTRGLTVMFEVMKTYGHTFEKHWWQDLFRIVFRIFDNMKLPE
QQTEKAEWMTTTCNHALYAICDVFTQYFESLNGVLLDDILAQLYWCVQQDNEQLARSGTN
CLENVVILNGEKFSPETWDKTCNCMLDIFKTTIPHALLTWRPAGADGEHLTTQSLSDKQL
DSISQKSVDIQSRSDDQHSISSADRVAMENRRQSQYSAASGMCEDGSRSRTPTKVQEQRL
FSALLIKCVVQLELIQTIDNIVFFPATSKKEDAENFAAAQRDAVCAADVPVETQDQGMYR
YLTSEQLFKLLDCLLESHRFAKAFNSNNEQRTLLWKAGFKGKSKPNLLKQETSSLACGLR
ILFRMYTDESRQDAWEEVQRRLLNVCSEAVAYFLALTSESHREAWTNLLLLFLTKVLKIS
DERFKAHASRYYPLLCEIMQFDLIPELRAVLRKFYLRIGLVFHIAQLPEPEPDPRQAHVE
PETDTEVGEEAQ
NT seq
5799 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagggcaaaaagacgaaaaacatgttccttacacgagctttggaaaagatcctg
gccgacaaggaggtgaaaaaggctcaccactcacagctgcgcaaagcctgcgaggtggca
cttgaggaaatcaaagaggaatcagaaaaattaagtccacccagtggagatggcaaatcg
ggttccagcactttaccgccaatcaaatcaaagaccaacttcattgaagccgacaagtac
ttcttgccgtttgagctggcatgtcagtctaaatgtccccgcattgtcatcacctcgctc
gactgtttacagaagctgatagcgtatggccacctgacaggcagcgccccggacagcacg
gctccaggcaagaagctcatcgacaggatcatcgagaccatctgtgcttgtttccaagga
ccacagactgatgaaggcgtgcagctacagattattaaggctctgttgacagcagtgacc
tctcagcacatagaaatccacgaaggtaccgtgctgcaggccgtccgcacgtgttacaac
atctacctggccagcaagaacctcatcaaccagaccacagccaaggccacgctcacacag
atgctcaacgtcatctttgcacgcatggagaatcaagcactgcaggaagcaaaacagctg
gagcgggagcggcaccggcagcactccccagtcacccagcacactgagccggactccccc
cagctccagactcacattcacctgcaagccaagggtctgacccaggaggccaatgggccc
gtcaccccttcgactcccagcatcaacatcccatccaccccatccaccccctcaacaccg
gccccggagagcagcagcaggtctgtgtctggggaacaggaggagcaaagggagccggag
gagcagggagaacagggacccgtctacgagaacccagatccagaaaatggttctgaattc
tgtgtggctgaaaatgaacagacggaggcagaccaagccaccgcagcggcacagaatgca
gcagcccagcagcatgcacaagcaggtgaggaggaggatgaggagaccccaaactatgag
gagaaagcccaggaaatagtccagagtattctacaggaggtggtcaatacggttgcagga
ggtcactgtctggacccagcaaaactctgctctgacaccaaggagtgtggtggcgaaggc
gagcctgcagagtctgagccgactgaagcggtgacagaaggcacccagagctccctggag
gacgagggcaccattgggagcgacagcgagcacgtccatgccaacggcatccccggcact
ccgatttctgccagcttcaccccgtcgctgcctgatgacagactgtctgtctcgtccaat
gacactcaggaatcaggagctgcaccgggccagccgccaggtgcgaaattctcccacatc
ctccagaaagatgccttccttgtctttcgctcgctctgcaaactgtcaatgaagccgctg
tcagatgggccacctgatccaaagtctcatgagttgcgatcgaaggtcttgtccctccag
ctgctgctgtccatcctgcagaacgctgggcccatcttcaagaccaatgagatgttcata
aacgccatcaagcagtacctgtgtgtggccctgtccaagaacggtgtctcctctgtgcct
gaggtcttcgaactctcactctccatcttcctcactctgctgtcccacttcaagacgcac
ctcaagatgcaaatcgaggttttcttcaaagagattttcctgtatatccttgagacgtcc
acaagctcttatgaccacaagtggatggtcatacaaaccctcacaagaatatgtgcagat
gcccagagcgtggtggacatctacgtgaactatgattgtgacttgaatgctgctaacata
tttgagcggttggtcaatgacctctcaaaaattgcacagggtcgcggaggccatgaactt
ggtacaacacctctgcaggagctgactctgagaaagaaaggccttgaatgtctagtgtcc
atcctgaaatgtatggtagaatggagtaaagaccaatacgtcaaccccaattctcagacc
agcctcgggcaagagaagccatcagagcaggagagcacagagaccaaggccccggagact
ataaatcgctatgggagcattaactctttggactccaccgcttcatctggcatcggaagc
tacagcacacagatgtcagggactgacaaccctgagcagtttgaagtgctcaaacagcag
aaggagatcattgagcagggcattgacctgttcaacaagaaaccaaagagaggaatacag
taccttcaagagcaaggcatgctgggtacaaccccagaggaccttgctcagttcttgcac
caggaggagagacttgattctactcaagtgggagaattcctcggggataatgaccgcttc
aataaagaggtgatgtatgcctacgtggatcaaatggacttccagggcaaagattttgtt
tctgcgctgaggatgttcctggagggctttcgactccctggagaggcccagaagatcgac
cggctcatggagaaatttgcagcaagatatcttgaatgcaatcaggggcaaaccctcttt
gccagcgctgacactgcatacgtccttgcctattcaatcattatgttgacaacagacctt
cacagtccacaggtgaagaataaaatgacaaaagagcaatatatcaagatgaaccgtggc
atcaacgacagcaaagacctacctgaggaatacctctcagccatatacgacgagattgca
gggaagaagattgccatgaaggaaactaaagagctcaccatgaaatccaacaagcaaagt
gtggccagtgagaagcagaggcgtctgctgtacaatgtggagatggagcagatggccaag
acagccaaagctctgatggaggctgtcagccatgtccaggctcccttcaccagtgccaca
catctggagcacgtcaggcccatgttcaagctggcgtggacgcccttcctggctgctttc
agtgtgggccttcaggactgcgatgacactgaagtggcctcactgtgtctcgaaggaatc
cgttgtgccatcaggatagcctgcatcttctccatacagttggagagggatgcatatgtg
caggccctggcaaggttcaccctgctgacagccagctctggcatcgctgaaatgaagcag
aagaacattgacaccatcaagaccctcatcactgtggcccacactgatggcaactacctg
ggcaactcctggcatgagatcatgaagtgcatcagtcagttggagctggctcagctgatt
ggcacaggggtgaaggcacgctacatctcagggacggtacggggcaaagagggctttgtt
acgagcaccaaggagcagagcaacgacgagtacctgggtctagtcggagggacggtggac
cgtaagcaaattgccagcattcaagagtccatcggggagaccagctcccagagtgtggtg
gtggctgtggacaggatattcacaggttctaccagactggatggaaatgcaatagttgat
tttgtgcgctggctgtgtgctgtgtccatggatgagctggcctcgcccacacacccacgc
atgttcagcctgcaaaaaatagtggaaatctcctactacaacatgggtcgcatcaggctg
cagtggtccaggatctgggaggttattggggaccactttaacaaggttgggtgtaattcc
aatgaagatgtggcaattttcgcagtggattctctcaggcaactgtccatgaaatttttg
gagaaaggggagctggctaacttcagattccagaaagactttctgaggcctttcgagcac
atcatgaaaaagaacaggtctcccaccatcagagacatggtggtgcgctgtatagcccag
atggttaactcccaggcagcgaacatccgctcaggatggaagaatatcttctctgttttc
cacctggctgcctctgaccaggatgagagcatcgtagaactggccttccagaccaccggc
cacatcgtcacgaatgtatttgaaaagcactttgcggctacaatcgactccttccaggat
gccgtcaagtgtctgtcagagtttgcctgcaatgcctctttcccagacaccagcatggaa
gccatccgcctcatccgacactgcgccaaatacgtctcagagaggccacaggccttcaaa
gactacaccagtgatgacatgaatgtagcgccagaggaccgtgtgtgggtgcgggggtgg
ttccccattctctttgagctctcctgcatcatcaacaggtgtaaattggatgtcaggacc
aggggcctgacagtgatgtttgaagtgatgaagacctatgggcacaccttcgagaaacac
tggtggcaagacctgttcagaatcgtcttcaggatctttgacaacatgaagctgcccgag
cagcagactgagaaagcagaatggatgaccaccacctgcaaccatgcactttatgccatc
tgtgatgtcttcacccaatattttgagtcactcaatggcgtcctgttggatgacatcctg
gctcaactctactggtgtgtgcagcaagataatgagcagcttgcccgttcaggcaccaac
tgtctagagaatgtggtcatcctgaatggagagaagttctccccggagacctgggacaag
acatgcaactgcatgctggacatcttcaagaccacaatcccacacgcgctgttaacatgg
agaccagcaggggcagacggagaacacttgacaacacagagcctttctgacaaacagctg
gactccatttcccagaagtcagtggatattcagtcccgctctgatgaccagcattccatc
agcagtgctgacagggtagcgatggagaaccgtcgacagagtcagtacagcgcagcctca
ggcatgtgtgaggacggctccaggagcaggaccccaacaaaggtccaggagcagcgttta
ttctcagctttgctgatcaagtgtgtcgtgcagctggagctgatccagaccattgacaac
atcgtgttttttcctgccaccagtaagaaggaagatgctgagaacttcgctgctgctcag
cgggatgctgtgtgtgcagcagatgtcccagtagagacccaggaccagggcatgtatcgc
tacctgacctccgagcagcttttcaaactgctggactgcctgctggagtcacaccgcttt
gccaaggctttcaactccaacaacgaacaaaggacattactatggaaagcaggtttcaaa
ggaaagtcgaagcccaacctgttgaagcaggagaccagcagtctggcatgtgggctgcgc
atcctgtttcgtatgtacacagacgagagccgccaagacgcctgggaggaagtccagaga
cgactgctcaatgtgtgcagtgaggccgtagcgtacttcttggctctgacctcagaaagc
cacagagaggcctggaccaacctgctgctgctcttcctcaccaaggtgctaaagatcagc
gatgaaaggttcaaggctcatgcgtccagatactaccctctcctgtgtgagatcatgcag
ttcgacctgatccctgagctccgggctgttctaaggaagttctacctgcgcatcggcctc
gtgtttcacatcgcacagctgcctgagcctgaaccggaccctcggcaggcacacgttgag
ccagagacagacacggaggtcggggaggaggcccagtga
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integrated database retrieval system
