Amphiprion ocellaris (clown anemonefish): 111572465
Help
Entry
111572465 CDS
T06018
Symbol
spata13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X2
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
111572465 (spata13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoce04131
]
111572465 (spata13)
Membrane trafficking [BR:
aoce04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
111572465 (spata13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
SH3_2
SH3_9
PH
Motif
Other DBs
NCBI-GeneID:
111572465
NCBI-ProteinID:
XP_023131906
Ensembl:
ENSAOCG00000011700
UniProt:
A0A3Q1B1E8
LinkDB
All DBs
Position
22:15494617..15509558
Genome browser
AA seq
1286 aa
AA seq
DB search
MSRAKQTDRVLSTSEDPLPCLHNSKADPVLRSRPLSDIYPSQTLADRNSVPYLLSGCGSQ
VQPMSTGPHSEESRLNGINSSAWSNPVIGPPEGKPYSSRIMRLFSNSKKGPIPAHSPTTD
SPALAHSNDGNGGPQSWAGLPGLGVVDSFKKLRSSVLQGIQSRGAASHDGEHEPLSYQEM
ANGTVVNNAEPHLADTANHLNIAEGYSVSNGNFTEQKLAAMSQYGSDTEDYDDDENEGDG
LTRSSRFSRSIRRAYGAGRISLLDIGNGRQVGRNSNETAGTTQKPDRTSDVNVQTENVNG
NTNVKVLSRLSKSADNLHIFKAPFRRKAPSPGPPSTQEDPQRTSTSNGESNIQRAASASS
VDLRGHAISRGKSPVKTKGPMLKLVGSMTDLSVRRRRSPSPSPTSPSPMSPLSRLHDDYS
RRVPCLQTNERQRRPMPVIAQVMSVEHTLLIHHQPEHDVIPQPSQVITSPPTSEPPETTE
QISPGVSAHYESHAGATTSGFKQMVEWESSTLSQTEPSQQQEQTEGNSLPNEVTSDQQVR
EALLQAEEDSPTTSSTPPTSPASHPESPISPTDAASTETSSVKPRRRSGRPRPRPISDYG
QLLSRKHSIPEEVAELHSEDRTANSLLLKGCSGNDGNEESPENCSMNGDVQSRRQRPMSV
AGAVDLFPPNAELKEDRLPSPLSRPPIPSHQVPPYRGVSARFRPSTLSQSTPIGLDRVGR
RKLHRVLSDGVSECSAILDDSVSEEEEGSFDELTDVTPYLQPGVELSVLNEWISSGHTVY
AEALWDHVTMEEQELAFKAGDVIRVLDASNKDWWWGIVADREAWFPSSFVRVRVNQEDSS
AESVESVADQGDPDPRETHSTQHKEQMRTNVVQEIMNTERIYIKHLKDICEGYIRQCRKH
PDMFTELQLKTIFSNIEEIYRFQRQFLRDLEKKYNKDQPHLSEIGSCFLLQGEGFSIYSE
YCNTHPAACAELHRLMKLGKYKHFFEACRLLQQMIDISIAGFLLTPVQKICKYPLQLGEL
LKYTPKDHSDHSGVSKAYEAMKNVASLINERKRRLESIDTIAHWQVAILHWEGPDVLERS
SELIHSGEMTRTVRQGKMQQRRFFLFDHQLVYCKKDVLRRDLLHYRGRLDMDQTEVLDVL
DGRDPDLGLTLKNALRLRNASTLEFVCMLCCRKAEDKQRWLQAFAKERHRVKEDQEMGMD
ISEEQRKQAIINARRAKQGKIKKLGYSGSVPPHHQNLHQNLHPLHQRHITIPTSVPQQQV
FTLAEPPKRKPYHLLYSITRNAFFRK
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgagcagggcaaaacaaacggacagggtcttatctacaagtgaagaccctctcccgtgc
ctccacaactcaaaagctgacccagttctccgcagcagacccctcagtgatatatatcca
agccagaccctcgctgacagaaattcagtcccttatctgctgtctggatgtggttcccag
gttcagccgatgagtactgggcctcactccgaagagagcagattgaacggcattaactcc
tccgcctggtccaaccctgttattggtcctcctgaaggaaaaccctactcctcaagaatt
atgaggcttttttctaactcaaagaagggccccatccctgctcacagcccaaccactgac
agtccagccttggcccacagcaacgacggcaacggtggcccccagtcatgggcaggactt
ccagggttgggagttgtggactccttcaaaaagctacggtcatctgtgcttcagggcatt
cagagtagaggggcagcaagtcacgatggagaacatgaacctttatcttatcaggaaatg
gctaatggcacagttgtgaacaatgctgaaccacatctagctgatacagcaaatcattta
aatattgcagagggatatagtgtgtctaatggaaattttacagagcaaaagttagctgcg
atgagccaatatggttcagatactgaggactatgatgatgacgaaaatgaaggagatggt
ctcactcgcagctcacgattctccaggagtatcaggagagcgtatggagcaggacgcatc
tctttacttgacattgggaacgggaggcaagtaggaagaaactcaaatgaaactgcaggt
accacacagaaaccagatcggacatctgacgtaaatgtccaaacggagaatgtgaatgga
aacacaaatgtgaaagtgctgagcagactgagcaaaagtgcagacaaccttcatatattt
aaggcaccttttagacgcaaagccccgtctccaggccctccttcaacacaggaagacccc
cagaggactagcacatcaaatggggaatcaaacatccaaagggctgccagtgcctcctca
gtggacctccgaggacatgctattagccgtgggaagagccccgtgaagaccaaaggaccg
atgctgaagctagttggcagtatgactgacctaagtgtccgacgcaggcgaagtccctcc
cccagccctacctctccatctcctatgtcacccttgagccgtctccatgacgactactcc
cgccgtgtgccttgcctacaaaccaatgagcggcagcgccgtccaatgcctgtcatagca
caggtcatgtctgtcgaacacactcttctgattcatcaccagcctgaacacgatgtcatc
ccacagccgagtcaggttattaccagccctcctacctcagagcccccagagacaacagag
cagatttcacctggtgtctctgctcattatgagtcgcacgctggagccacgacaagtggt
tttaaacagatggttgaatgggaatcatccacactcagccaaacagaaccttcacaacag
caagaacagactgaaggaaactcattaccaaacgaggtgacatcagaccagcaagtacga
gaagcacttctccaagcagaggaagactctccgacaaccagcagcacacctcccacctcc
ccagcatcccacccagagtcccctatatcacccacagatgcggcttccacagaaacatcc
tccgtcaagccgagacgaagaagtgggcgtccaagaccccgtcccatttctgactacggg
cagctgctttccaggaagcattcaatcccagaggaagttgcagagctgcattctgaggac
aggacagcaaattcactgctgcttaaaggctgcagtggtaacgatgggaatgaggaaagc
cctgaaaactgcagcatgaatggtgacgttcagagcaggaggcagcggcccatgtcagtg
gcaggagctgtggatctgttccctcccaatgctgagctgaaggaagaccgccttccttct
cctttgtcgcgaccaccaattccctcccaccaagttcccccctacagaggagtgtctgcc
aggtttcgtccctccaccctctcccagagcacccccatcggactagaccgtgtggggcgg
cgcaaactccacagagtgctcagcgatggtgtgtctgagtgttcggccatacttgatgac
agcgtgagtgaggaggaggagggcagctttgatgaactcacagatgtcacgccctacctc
cagccaggggtggagctctcagttctcaatgagtggatcagctcaggccacacggtgtat
gctgaggctctgtgggaccatgtgaccatggaggagcaagagctggccttcaaggctgga
gatgttatccgtgttctggacgcctcaaataaggactggtggtggggcattgtagctgac
agggaggcctggtttccctccagctttgtgagggtgcgtgtgaaccaggaggactcgagc
gctgaaagtgtggagagtgtagcagatcaaggagatccagatcccagggagacacacagc
actcagcacaaggagcagatgagaaccaatgtggttcaggaaatcatgaatactgaacgt
atttacatcaaacacctaaaagacatctgtgagggttacatccgtcagtgccgcaaacac
cccgacatgttcaccgagctgcagctgaaaactatcttcagcaacatagaagaaatctac
aggtttcagaggcagttcctgcgagatctggagaagaagtacaacaaagatcaaccacat
ctcagtgaaataggctcctgctttctcttgcagggggagggcttctctatctactcagag
tactgtaacactcatccagcagcctgtgctgagctgcaccgcctaatgaagttggggaaa
tacaagcatttctttgaggcctgccgcctcctccagcagatgattgacatttccatagct
ggtttcttactcacacctgtccagaagatctgtaaataccccctgcagctgggggaactt
ctcaagtacacacccaaagaccacagtgaccacagtggagtgagcaaagcatacgaggct
atgaagaatgtggccagtctgataaatgagaggaagagacggctagagagtatcgacacc
attgctcattggcaggtcgccattttgcactgggagggacctgatgtgttggagcgcagc
tcagagctgatccactctggtgagatgactcgaactgttcgacaaggcaaaatgcagcag
cgcaggttcttcctgtttgaccaccagctggtctactgtaaaaaagacgtcctgcggaga
gacttgctccactaccgtggacgactggatatggaccagaccgaggtgctggacgtgctt
gacgggcgggacccagacctgggcctgaccctgaagaacgctctgcgtctgcgcaacgcc
tccactctggaatttgtgtgcatgctgtgctgcaggaaggccgaggacaagcagaggtgg
ttacaagcctttgccaaggagaggcacagagtgaaggaggaccaagagatgggaatggat
atcagtgaagagcaaagaaaacaggccatcattaacgccagaagagctaaacaggggaaa
atcaaaaaacttggttactctggttctgtcccaccacaccaccaaaacctgcaccaaaac
cttcacccacttcaccagcgccacatcaccattcccaccagcgtgcctcagcagcaggtc
tttacactggccgaacccccaaaacgaaagccttatcatttgttgtacagcatcacccgc
aacgcctttttcaggaaatga
DBGET
integrated database retrieval system
